Atomistry » Iron » PDB 7dgk-7dy8 » 7dn7
Atomistry »
  Iron »
    PDB 7dgk-7dy8 »
      7dn7 »

Iron in PDB 7dn7: Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution

Enzymatic activity of Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution

All present enzymatic activity of Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution:
1.11.1.7;

Protein crystallography data

The structure of Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution, PDB code: 7dn7 was solved by P.K.Singh, A.K.Singh, R.P.Singh, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.71 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.92, 79.498, 77.723, 90, 102.25, 90
R / Rfree (%) 18.1 / 20.4

Other elements in 7dn7:

The structure of Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution also contains other interesting chemical elements:

Zinc (Zn) 1 atom
Iodine (I) 19 atoms
Calcium (Ca) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution (pdb code 7dn7). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution, PDB code: 7dn7:

Iron binding site 1 out of 1 in 7dn7

Go back to Iron Binding Sites List in 7dn7
Iron binding site 1 out of 1 in the Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:13.9
occ:1.00
 FE A:HEM601 0.0 13.9 1.0
ND A:HEM601 1.9 12.3 1.0
NA A:HEM601 2.0 10.3 1.0
NE2 A:HIS351 2.1 14.1 1.0
NC A:HEM601 2.1 11.9 1.0
NB A:HEM601 2.1 12.3 1.0
O2 A:PEO628 2.3 25.2 1.0
C1D A:HEM601 3.0 12.3 1.0
C4D A:HEM601 3.0 12.1 1.0
C1A A:HEM601 3.0 11.6 1.0
C1B A:HEM601 3.0 12.9 1.0
C4A A:HEM601 3.0 12.8 1.0
C4B A:HEM601 3.1 12.0 1.0
C4C A:HEM601 3.1 13.2 1.0
CE1 A:HIS351 3.1 12.4 1.0
CD2 A:HIS351 3.1 12.9 1.0
C1C A:HEM601 3.1 11.5 1.0
CHA A:HEM601 3.4 12.0 1.0
CHB A:HEM601 3.4 11.2 1.0
CHD A:HEM601 3.4 12.8 1.0
CHC A:HEM601 3.5 10.5 1.0
O1 A:PEO628 3.5 19.2 1.0
C3A A:HEM601 4.2 12.1 1.0
ND1 A:HIS351 4.2 12.0 1.0
C2A A:HEM601 4.2 11.7 1.0
C2C A:HEM601 4.2 11.1 1.0
CG A:HIS351 4.2 13.4 1.0
C2B A:HEM601 4.3 13.3 1.0
C3D A:HEM601 4.3 12.8 1.0
C2D A:HEM601 4.3 12.2 1.0
C3C A:HEM601 4.3 11.2 1.0
C3B A:HEM601 4.3 11.7 1.0
NE2 A:GLN105 4.4 13.8 1.0
CD2 A:LEU433 4.8 13.2 1.0
I A:IOD619 5.0 24.4 0.5

Reference:

P.K.Singh, S.Sharma, T.P.Singh. Crystal Structure of Ternary Complexes of Lactoperoxidase with Hydrogen Peroxide at 1.70 A Resolution To Be Published.
Page generated: Thu Aug 8 04:03:03 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy