Iron in PDB 7e1x: Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Enzymatic activity of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
All present enzymatic activity of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47:
7.1.1.8;
7.1.1.9;
Other elements in 7e1x:
The structure of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
16;
Binding sites:
The binding sites of Iron atom in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
(pdb code 7e1x). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 16 binding sites of Iron where determined in the
Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47, PDB code: 7e1x:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 1 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe606
b:70.7
occ:1.00
|
FE
|
F:HEA606
|
0.0
|
70.7
|
1.0
|
NA
|
F:HEA606
|
1.9
|
70.7
|
1.0
|
ND
|
F:HEA606
|
2.0
|
70.7
|
1.0
|
NC
|
F:HEA606
|
2.0
|
70.7
|
1.0
|
NB
|
F:HEA606
|
2.1
|
70.7
|
1.0
|
NE2
|
F:HIS397
|
2.7
|
63.0
|
1.0
|
C4A
|
F:HEA606
|
2.9
|
70.7
|
1.0
|
C1C
|
F:HEA606
|
3.0
|
70.7
|
1.0
|
C4D
|
F:HEA606
|
3.0
|
70.7
|
1.0
|
C1D
|
F:HEA606
|
3.0
|
70.7
|
1.0
|
C4C
|
F:HEA606
|
3.1
|
70.7
|
1.0
|
C1A
|
F:HEA606
|
3.1
|
70.7
|
1.0
|
C1B
|
F:HEA606
|
3.1
|
70.7
|
1.0
|
C4B
|
F:HEA606
|
3.1
|
70.7
|
1.0
|
CHC
|
F:HEA606
|
3.3
|
70.7
|
1.0
|
CHD
|
F:HEA606
|
3.4
|
70.7
|
1.0
|
CHB
|
F:HEA606
|
3.4
|
70.7
|
1.0
|
CHA
|
F:HEA606
|
3.4
|
70.7
|
1.0
|
CE1
|
F:HIS397
|
3.6
|
63.0
|
1.0
|
CD2
|
F:HIS397
|
3.8
|
63.0
|
1.0
|
C3A
|
F:HEA606
|
4.1
|
70.7
|
1.0
|
C2C
|
F:HEA606
|
4.2
|
70.7
|
1.0
|
C3D
|
F:HEA606
|
4.2
|
70.7
|
1.0
|
C2A
|
F:HEA606
|
4.2
|
70.7
|
1.0
|
C2D
|
F:HEA606
|
4.2
|
70.7
|
1.0
|
C3C
|
F:HEA606
|
4.3
|
70.7
|
1.0
|
C2B
|
F:HEA606
|
4.3
|
70.7
|
1.0
|
C3B
|
F:HEA606
|
4.4
|
70.7
|
1.0
|
CE1
|
F:HIS264
|
4.7
|
65.2
|
1.0
|
ND1
|
F:HIS397
|
4.8
|
63.0
|
1.0
|
CG
|
F:HIS397
|
4.9
|
63.0
|
1.0
|
CU
|
F:CU605
|
5.0
|
139.1
|
1.0
|
|
Iron binding site 2 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 2 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe607
b:61.4
occ:1.00
|
FE
|
F:HEA607
|
0.0
|
61.4
|
1.0
|
NA
|
F:HEA607
|
1.9
|
61.4
|
1.0
|
ND
|
F:HEA607
|
2.0
|
61.4
|
1.0
|
NC
|
F:HEA607
|
2.0
|
61.4
|
1.0
|
NB
|
F:HEA607
|
2.1
|
61.4
|
1.0
|
NE2
|
F:HIS399
|
2.4
|
59.5
|
1.0
|
NE2
|
F:HIS86
|
2.5
|
54.3
|
1.0
|
C4A
|
F:HEA607
|
2.9
|
61.4
|
1.0
|
C4D
|
F:HEA607
|
3.0
|
61.4
|
1.0
|
C1C
|
F:HEA607
|
3.0
|
61.4
|
1.0
|
C1D
|
F:HEA607
|
3.0
|
61.4
|
1.0
|
C4C
|
F:HEA607
|
3.1
|
61.4
|
1.0
|
C1A
|
F:HEA607
|
3.1
|
61.4
|
1.0
|
C4B
|
F:HEA607
|
3.1
|
61.4
|
1.0
|
C1B
|
F:HEA607
|
3.1
|
61.4
|
1.0
|
CE1
|
F:HIS399
|
3.1
|
59.5
|
1.0
|
CD2
|
F:HIS86
|
3.2
|
54.3
|
1.0
|
CHC
|
F:HEA607
|
3.3
|
61.4
|
1.0
|
CHD
|
F:HEA607
|
3.4
|
61.4
|
1.0
|
CHB
|
F:HEA607
|
3.4
|
61.4
|
1.0
|
CHA
|
F:HEA607
|
3.4
|
61.4
|
1.0
|
CD2
|
F:HIS399
|
3.6
|
59.5
|
1.0
|
CE1
|
F:HIS86
|
3.6
|
54.3
|
1.0
|
C3A
|
F:HEA607
|
4.1
|
61.4
|
1.0
|
C2C
|
F:HEA607
|
4.2
|
61.4
|
1.0
|
C3D
|
F:HEA607
|
4.2
|
61.4
|
1.0
|
C2D
|
F:HEA607
|
4.2
|
61.4
|
1.0
|
C2A
|
F:HEA607
|
4.2
|
61.4
|
1.0
|
C3C
|
F:HEA607
|
4.3
|
61.4
|
1.0
|
ND1
|
F:HIS399
|
4.3
|
59.5
|
1.0
|
C2B
|
F:HEA607
|
4.3
|
61.4
|
1.0
|
C3B
|
F:HEA607
|
4.4
|
61.4
|
1.0
|
CG
|
F:HIS86
|
4.4
|
54.3
|
1.0
|
CG
|
F:HIS399
|
4.6
|
59.5
|
1.0
|
ND1
|
F:HIS86
|
4.6
|
54.3
|
1.0
|
|
Iron binding site 3 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 3 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Fe606
b:58.5
occ:1.00
|
FE
|
R:HEA606
|
0.0
|
58.5
|
1.0
|
NA
|
R:HEA606
|
1.9
|
58.5
|
1.0
|
ND
|
R:HEA606
|
2.0
|
58.5
|
1.0
|
NC
|
R:HEA606
|
2.0
|
58.5
|
1.0
|
NB
|
R:HEA606
|
2.1
|
58.5
|
1.0
|
NE2
|
R:HIS397
|
2.7
|
51.4
|
1.0
|
C4A
|
R:HEA606
|
2.9
|
58.5
|
1.0
|
C1C
|
R:HEA606
|
3.0
|
58.5
|
1.0
|
C4D
|
R:HEA606
|
3.0
|
58.5
|
1.0
|
C1D
|
R:HEA606
|
3.0
|
58.5
|
1.0
|
C4C
|
R:HEA606
|
3.1
|
58.5
|
1.0
|
C1A
|
R:HEA606
|
3.1
|
58.5
|
1.0
|
C1B
|
R:HEA606
|
3.1
|
58.5
|
1.0
|
C4B
|
R:HEA606
|
3.1
|
58.5
|
1.0
|
CHC
|
R:HEA606
|
3.3
|
58.5
|
1.0
|
CHD
|
R:HEA606
|
3.4
|
58.5
|
1.0
|
CHB
|
R:HEA606
|
3.4
|
58.5
|
1.0
|
CHA
|
R:HEA606
|
3.4
|
58.5
|
1.0
|
CE1
|
R:HIS397
|
3.6
|
51.4
|
1.0
|
CD2
|
R:HIS397
|
3.8
|
51.4
|
1.0
|
C3A
|
R:HEA606
|
4.1
|
58.5
|
1.0
|
C2C
|
R:HEA606
|
4.2
|
58.5
|
1.0
|
C3D
|
R:HEA606
|
4.2
|
58.5
|
1.0
|
C2A
|
R:HEA606
|
4.2
|
58.5
|
1.0
|
C2D
|
R:HEA606
|
4.2
|
58.5
|
1.0
|
C3C
|
R:HEA606
|
4.3
|
58.5
|
1.0
|
C2B
|
R:HEA606
|
4.3
|
58.5
|
1.0
|
C3B
|
R:HEA606
|
4.4
|
58.5
|
1.0
|
CU
|
R:CU605
|
4.6
|
138.9
|
1.0
|
ND1
|
R:HIS397
|
4.8
|
51.4
|
1.0
|
CG
|
R:HIS397
|
4.9
|
51.4
|
1.0
|
|
Iron binding site 4 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 4 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Fe607
b:50.8
occ:1.00
|
FE
|
R:HEA607
|
0.0
|
50.8
|
1.0
|
NA
|
R:HEA607
|
1.9
|
50.8
|
1.0
|
ND
|
R:HEA607
|
2.0
|
50.8
|
1.0
|
NC
|
R:HEA607
|
2.0
|
50.8
|
1.0
|
NB
|
R:HEA607
|
2.1
|
50.8
|
1.0
|
NE2
|
R:HIS399
|
2.4
|
48.8
|
1.0
|
NE2
|
R:HIS86
|
2.5
|
45.5
|
1.0
|
C4A
|
R:HEA607
|
2.9
|
50.8
|
1.0
|
C1C
|
R:HEA607
|
3.0
|
50.8
|
1.0
|
C4D
|
R:HEA607
|
3.0
|
50.8
|
1.0
|
C1D
|
R:HEA607
|
3.0
|
50.8
|
1.0
|
C4C
|
R:HEA607
|
3.1
|
50.8
|
1.0
|
C1A
|
R:HEA607
|
3.1
|
50.8
|
1.0
|
C4B
|
R:HEA607
|
3.1
|
50.8
|
1.0
|
C1B
|
R:HEA607
|
3.1
|
50.8
|
1.0
|
CE1
|
R:HIS399
|
3.1
|
48.8
|
1.0
|
CD2
|
R:HIS86
|
3.2
|
45.5
|
1.0
|
CHC
|
R:HEA607
|
3.3
|
50.8
|
1.0
|
CHD
|
R:HEA607
|
3.4
|
50.8
|
1.0
|
CHB
|
R:HEA607
|
3.4
|
50.8
|
1.0
|
CHA
|
R:HEA607
|
3.4
|
50.8
|
1.0
|
CD2
|
R:HIS399
|
3.6
|
48.8
|
1.0
|
CE1
|
R:HIS86
|
3.6
|
45.5
|
1.0
|
C3A
|
R:HEA607
|
4.1
|
50.8
|
1.0
|
C2C
|
R:HEA607
|
4.2
|
50.8
|
1.0
|
C3D
|
R:HEA607
|
4.2
|
50.8
|
1.0
|
C2D
|
R:HEA607
|
4.2
|
50.8
|
1.0
|
C2A
|
R:HEA607
|
4.2
|
50.8
|
1.0
|
C3C
|
R:HEA607
|
4.3
|
50.8
|
1.0
|
ND1
|
R:HIS399
|
4.3
|
48.8
|
1.0
|
C2B
|
R:HEA607
|
4.3
|
50.8
|
1.0
|
C3B
|
R:HEA607
|
4.4
|
50.8
|
1.0
|
CG
|
R:HIS86
|
4.4
|
45.5
|
1.0
|
CG
|
R:HIS399
|
4.6
|
48.8
|
1.0
|
ND1
|
R:HIS86
|
4.6
|
45.5
|
1.0
|
|
Iron binding site 5 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 5 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe601
b:49.6
occ:1.00
|
FE
|
N:HEM601
|
0.0
|
49.6
|
1.0
|
NB
|
N:HEM601
|
2.0
|
49.6
|
1.0
|
NC
|
N:HEM601
|
2.0
|
49.6
|
1.0
|
ND
|
N:HEM601
|
2.0
|
49.6
|
1.0
|
NA
|
N:HEM601
|
2.0
|
49.6
|
1.0
|
NE2
|
N:HIS231
|
2.5
|
50.8
|
1.0
|
NE2
|
N:HIS128
|
2.6
|
45.7
|
1.0
|
CD2
|
N:HIS128
|
3.0
|
45.7
|
1.0
|
C1C
|
N:HEM601
|
3.0
|
49.6
|
1.0
|
C4C
|
N:HEM601
|
3.0
|
49.6
|
1.0
|
C4B
|
N:HEM601
|
3.0
|
49.6
|
1.0
|
C1B
|
N:HEM601
|
3.0
|
49.6
|
1.0
|
C4D
|
N:HEM601
|
3.1
|
49.6
|
1.0
|
C1D
|
N:HEM601
|
3.1
|
49.6
|
1.0
|
C4A
|
N:HEM601
|
3.1
|
49.6
|
1.0
|
C1A
|
N:HEM601
|
3.1
|
49.6
|
1.0
|
CE1
|
N:HIS231
|
3.1
|
50.8
|
1.0
|
CHC
|
N:HEM601
|
3.4
|
49.6
|
1.0
|
CHD
|
N:HEM601
|
3.4
|
49.6
|
1.0
|
CHA
|
N:HEM601
|
3.4
|
49.6
|
1.0
|
CHB
|
N:HEM601
|
3.4
|
49.6
|
1.0
|
CD2
|
N:HIS231
|
3.6
|
50.8
|
1.0
|
CE1
|
N:HIS128
|
3.9
|
45.7
|
1.0
|
C2C
|
N:HEM601
|
4.1
|
49.6
|
1.0
|
C3C
|
N:HEM601
|
4.2
|
49.6
|
1.0
|
C3B
|
N:HEM601
|
4.2
|
49.6
|
1.0
|
C2B
|
N:HEM601
|
4.2
|
49.6
|
1.0
|
C3D
|
N:HEM601
|
4.3
|
49.6
|
1.0
|
C2D
|
N:HEM601
|
4.3
|
49.6
|
1.0
|
C3A
|
N:HEM601
|
4.3
|
49.6
|
1.0
|
C2A
|
N:HEM601
|
4.3
|
49.6
|
1.0
|
CG
|
N:HIS128
|
4.3
|
45.7
|
1.0
|
ND1
|
N:HIS231
|
4.3
|
50.8
|
1.0
|
CG
|
N:HIS231
|
4.5
|
50.8
|
1.0
|
ND1
|
N:HIS128
|
4.7
|
45.7
|
1.0
|
|
Iron binding site 6 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 6 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe602
b:43.2
occ:1.00
|
FE
|
N:HEM602
|
0.0
|
43.2
|
1.0
|
NA
|
N:HEM602
|
2.0
|
43.2
|
1.0
|
NC
|
N:HEM602
|
2.0
|
43.2
|
1.0
|
NB
|
N:HEM602
|
2.0
|
43.2
|
1.0
|
ND
|
N:HEM602
|
2.0
|
43.2
|
1.0
|
NE2
|
N:HIS216
|
2.5
|
43.0
|
1.0
|
NE2
|
N:HIS114
|
2.6
|
39.6
|
1.0
|
CE1
|
N:HIS216
|
2.9
|
43.0
|
1.0
|
C4A
|
N:HEM602
|
3.0
|
43.2
|
1.0
|
C1A
|
N:HEM602
|
3.0
|
43.2
|
1.0
|
C1B
|
N:HEM602
|
3.0
|
43.2
|
1.0
|
C4D
|
N:HEM602
|
3.0
|
43.2
|
1.0
|
C1C
|
N:HEM602
|
3.0
|
43.2
|
1.0
|
C4B
|
N:HEM602
|
3.1
|
43.2
|
1.0
|
C4C
|
N:HEM602
|
3.1
|
43.2
|
1.0
|
C1D
|
N:HEM602
|
3.1
|
43.2
|
1.0
|
CD2
|
N:HIS114
|
3.2
|
39.6
|
1.0
|
CHA
|
N:HEM602
|
3.4
|
43.2
|
1.0
|
CHB
|
N:HEM602
|
3.4
|
43.2
|
1.0
|
CHC
|
N:HEM602
|
3.4
|
43.2
|
1.0
|
CHD
|
N:HEM602
|
3.5
|
43.2
|
1.0
|
CE1
|
N:HIS114
|
3.7
|
39.6
|
1.0
|
CD2
|
N:HIS216
|
3.7
|
43.0
|
1.0
|
C3A
|
N:HEM602
|
4.2
|
43.2
|
1.0
|
C2A
|
N:HEM602
|
4.2
|
43.2
|
1.0
|
ND1
|
N:HIS216
|
4.2
|
43.0
|
1.0
|
C2B
|
N:HEM602
|
4.3
|
43.2
|
1.0
|
C3D
|
N:HEM602
|
4.3
|
43.2
|
1.0
|
C2C
|
N:HEM602
|
4.3
|
43.2
|
1.0
|
C3B
|
N:HEM602
|
4.3
|
43.2
|
1.0
|
C3C
|
N:HEM602
|
4.3
|
43.2
|
1.0
|
C2D
|
N:HEM602
|
4.3
|
43.2
|
1.0
|
CG
|
N:HIS114
|
4.5
|
39.6
|
1.0
|
CG
|
N:HIS216
|
4.6
|
43.0
|
1.0
|
ND1
|
N:HIS114
|
4.7
|
39.6
|
1.0
|
CA
|
N:GLY163
|
4.8
|
47.4
|
1.0
|
|
Iron binding site 7 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 7 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Fe501
b:84.0
occ:1.00
|
FE1
|
M:FES501
|
0.0
|
84.0
|
1.0
|
SG
|
M:CYS372
|
1.8
|
60.1
|
1.0
|
S2
|
M:FES501
|
2.2
|
84.0
|
1.0
|
S1
|
M:FES501
|
2.2
|
84.0
|
1.0
|
SG
|
M:CYS353
|
2.5
|
59.5
|
1.0
|
CB
|
M:CYS372
|
2.8
|
60.1
|
1.0
|
FE2
|
M:FES501
|
3.1
|
84.0
|
1.0
|
CB
|
M:CYS353
|
3.1
|
59.5
|
1.0
|
CA
|
M:CYS372
|
4.2
|
60.1
|
1.0
|
OG
|
M:SER360
|
4.4
|
63.9
|
1.0
|
OG
|
M:SER377
|
4.5
|
60.3
|
1.0
|
CB
|
M:CYS358
|
4.6
|
64.1
|
1.0
|
CA
|
M:CYS353
|
4.6
|
59.5
|
1.0
|
ND1
|
M:HIS375
|
4.7
|
60.9
|
1.0
|
CB
|
M:HIS355
|
4.7
|
61.1
|
1.0
|
C
|
M:CYS372
|
4.7
|
60.1
|
1.0
|
CB
|
M:CYS374
|
4.7
|
64.5
|
1.0
|
CB
|
M:SER377
|
4.7
|
60.3
|
1.0
|
ND1
|
M:HIS355
|
4.8
|
61.1
|
1.0
|
N
|
M:HIS375
|
4.8
|
60.9
|
1.0
|
O
|
M:CYS358
|
4.9
|
64.1
|
1.0
|
N
|
M:CYS358
|
4.9
|
64.1
|
1.0
|
O
|
M:CYS372
|
4.9
|
60.1
|
1.0
|
|
Iron binding site 8 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 8 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Fe501
b:84.0
occ:1.00
|
FE2
|
M:FES501
|
0.0
|
84.0
|
1.0
|
S1
|
M:FES501
|
2.2
|
84.0
|
1.0
|
S2
|
M:FES501
|
2.2
|
84.0
|
1.0
|
ND1
|
M:HIS355
|
2.2
|
61.1
|
1.0
|
ND1
|
M:HIS375
|
2.3
|
60.9
|
1.0
|
CE1
|
M:HIS355
|
3.1
|
61.1
|
1.0
|
CE1
|
M:HIS375
|
3.1
|
60.9
|
1.0
|
FE1
|
M:FES501
|
3.1
|
84.0
|
1.0
|
CG
|
M:HIS375
|
3.3
|
60.9
|
1.0
|
CG
|
M:HIS355
|
3.3
|
61.1
|
1.0
|
CB
|
M:HIS375
|
3.7
|
60.9
|
1.0
|
CB
|
M:HIS355
|
3.7
|
61.1
|
1.0
|
N
|
M:LEU356
|
4.2
|
61.3
|
1.0
|
NE2
|
M:HIS355
|
4.3
|
61.1
|
1.0
|
NE2
|
M:HIS375
|
4.3
|
60.9
|
1.0
|
N
|
M:HIS375
|
4.3
|
60.9
|
1.0
|
CD2
|
M:HIS375
|
4.4
|
60.9
|
1.0
|
CD2
|
M:HIS355
|
4.4
|
61.1
|
1.0
|
CB
|
M:LEU356
|
4.4
|
61.3
|
1.0
|
SG
|
M:CYS372
|
4.5
|
60.1
|
1.0
|
CA
|
M:HIS375
|
4.6
|
60.9
|
1.0
|
CG
|
M:LEU356
|
4.6
|
61.3
|
1.0
|
CD1
|
M:LEU356
|
4.7
|
61.3
|
1.0
|
SG
|
M:CYS353
|
4.7
|
59.5
|
1.0
|
OG
|
M:SER377
|
4.8
|
60.3
|
1.0
|
C
|
M:HIS355
|
4.8
|
61.1
|
1.0
|
CA
|
M:HIS355
|
4.8
|
61.1
|
1.0
|
CB
|
M:CYS374
|
4.8
|
64.5
|
1.0
|
CA
|
M:LEU356
|
4.9
|
61.3
|
1.0
|
|
Iron binding site 9 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 9 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe304
b:92.2
occ:1.00
|
FE
|
O:HEC304
|
0.0
|
92.2
|
1.0
|
NC
|
O:HEC304
|
2.0
|
92.2
|
1.0
|
NA
|
O:HEC304
|
2.0
|
92.2
|
1.0
|
ND
|
O:HEC304
|
2.0
|
92.2
|
1.0
|
NB
|
O:HEC304
|
2.1
|
92.2
|
1.0
|
NE2
|
O:HIS77
|
2.4
|
93.0
|
1.0
|
SD
|
O:MET108
|
2.8
|
89.6
|
1.0
|
C4C
|
O:HEC304
|
3.0
|
92.2
|
1.0
|
C1D
|
O:HEC304
|
3.0
|
92.2
|
1.0
|
C1B
|
O:HEC304
|
3.1
|
92.2
|
1.0
|
C1A
|
O:HEC304
|
3.1
|
92.2
|
1.0
|
C4A
|
O:HEC304
|
3.1
|
92.2
|
1.0
|
C4D
|
O:HEC304
|
3.1
|
92.2
|
1.0
|
C1C
|
O:HEC304
|
3.1
|
92.2
|
1.0
|
C4B
|
O:HEC304
|
3.1
|
92.2
|
1.0
|
CE1
|
O:HIS77
|
3.3
|
93.0
|
1.0
|
CHD
|
O:HEC304
|
3.4
|
92.2
|
1.0
|
CHA
|
O:HEC304
|
3.4
|
92.2
|
1.0
|
CHB
|
O:HEC304
|
3.4
|
92.2
|
1.0
|
CHC
|
O:HEC304
|
3.5
|
92.2
|
1.0
|
CD2
|
O:HIS77
|
3.5
|
93.0
|
1.0
|
CE
|
O:MET108
|
3.6
|
89.6
|
1.0
|
C2B
|
O:HEC304
|
4.2
|
92.2
|
1.0
|
C3B
|
O:HEC304
|
4.3
|
92.2
|
1.0
|
C3C
|
O:HEC304
|
4.3
|
92.2
|
1.0
|
C2A
|
O:HEC304
|
4.3
|
92.2
|
1.0
|
C3A
|
O:HEC304
|
4.3
|
92.2
|
1.0
|
C2C
|
O:HEC304
|
4.3
|
92.2
|
1.0
|
C2D
|
O:HEC304
|
4.3
|
92.2
|
1.0
|
C3D
|
O:HEC304
|
4.3
|
92.2
|
1.0
|
CG
|
O:MET108
|
4.3
|
89.6
|
1.0
|
ND1
|
O:HIS77
|
4.4
|
93.0
|
1.0
|
CG
|
O:HIS77
|
4.6
|
93.0
|
1.0
|
|
Iron binding site 10 out
of 16 in 7e1x
Go back to
Iron Binding Sites List in 7e1x
Iron binding site 10 out
of 16 in the Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe305
b:78.2
occ:1.00
|
FE
|
O:HEC305
|
0.0
|
78.2
|
1.0
|
NA
|
O:HEC305
|
2.0
|
78.2
|
1.0
|
NC
|
O:HEC305
|
2.0
|
78.2
|
1.0
|
NB
|
O:HEC305
|
2.0
|
78.2
|
1.0
|
ND
|
O:HEC305
|
2.1
|
78.2
|
1.0
|
NE2
|
O:HIS178
|
2.6
|
75.1
|
1.0
|
SD
|
O:MET215
|
2.9
|
76.3
|
1.0
|
C1A
|
O:HEC305
|
3.0
|
78.2
|
1.0
|
C4C
|
O:HEC305
|
3.1
|
78.2
|
1.0
|
C1C
|
O:HEC305
|
3.1
|
78.2
|
1.0
|
C4D
|
O:HEC305
|
3.1
|
78.2
|
1.0
|
C1D
|
O:HEC305
|
3.1
|
78.2
|
1.0
|
C4B
|
O:HEC305
|
3.1
|
78.2
|
1.0
|
C4A
|
O:HEC305
|
3.1
|
78.2
|
1.0
|
C1B
|
O:HEC305
|
3.1
|
78.2
|
1.0
|
CHA
|
O:HEC305
|
3.4
|
78.2
|
1.0
|
CHD
|
O:HEC305
|
3.4
|
78.2
|
1.0
|
CHC
|
O:HEC305
|
3.4
|
78.2
|
1.0
|
CHB
|
O:HEC305
|
3.4
|
78.2
|
1.0
|
CE
|
O:MET215
|
3.5
|
76.3
|
1.0
|
CE1
|
O:HIS178
|
3.5
|
75.1
|
1.0
|
CD2
|
O:HIS178
|
3.6
|
75.1
|
1.0
|
CG
|
O:MET215
|
3.6
|
76.3
|
1.0
|
C2C
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
C2A
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
C3C
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
C3A
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
C3B
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
C3D
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
C2D
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
C2B
|
O:HEC305
|
4.3
|
78.2
|
1.0
|
CB
|
O:MET215
|
4.4
|
76.3
|
1.0
|
ND1
|
O:HIS178
|
4.6
|
75.1
|
1.0
|
CG
|
O:HIS178
|
4.7
|
75.1
|
1.0
|
|
Reference:
S.Zhou,
W.Wang,
Y.Gao,
H.Gong,
Z.Rao.
Cryo-Em Structure of Hybrid Respiratory Supercomplex Consisting of Mycobacterium Tuberculosis Complexiii and Mycobacterium Smegmatis Complexiv in Presence of TB47 To Be Published.
Page generated: Thu Aug 8 04:45:27 2024
|