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Iron in PDB 7ead: Crystal Structure of Beta-Sheet Cytochrome C Prime From Thermus Thermophilus.

Protein crystallography data

The structure of Crystal Structure of Beta-Sheet Cytochrome C Prime From Thermus Thermophilus., PDB code: 7ead was solved by T.Yoshimi, S.Fujii, H.Oki, T.Igawa, R.H.Adams, K.Ueda, K.Kawahara, T.Ohkubo, A.M.Hough, Y.Sambongi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.42 / 1.74
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 38.83, 81.225, 82.305, 90, 90, 90
R / Rfree (%) 18.7 / 20.9

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Beta-Sheet Cytochrome C Prime From Thermus Thermophilus. (pdb code 7ead). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Beta-Sheet Cytochrome C Prime From Thermus Thermophilus., PDB code: 7ead:

Iron binding site 1 out of 1 in 7ead

Go back to Iron Binding Sites List in 7ead
Iron binding site 1 out of 1 in the Crystal Structure of Beta-Sheet Cytochrome C Prime From Thermus Thermophilus.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Beta-Sheet Cytochrome C Prime From Thermus Thermophilus. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:16.1
occ:1.00
FE A:HEC201 0.0 16.1 1.0
NB A:HEC201 2.0 15.4 1.0
NC A:HEC201 2.0 16.4 1.0
NA A:HEC201 2.1 15.1 1.0
ND A:HEC201 2.1 14.8 1.0
NE2 A:HIS120 2.2 15.4 1.0
C1C A:HEC201 3.0 15.4 1.0
C4B A:HEC201 3.0 17.0 1.0
C1A A:HEC201 3.1 14.8 1.0
C1B A:HEC201 3.1 16.9 1.0
C4C A:HEC201 3.1 16.0 1.0
C4A A:HEC201 3.1 14.6 1.0
C1D A:HEC201 3.1 15.8 1.0
C4D A:HEC201 3.1 16.6 1.0
CE1 A:HIS120 3.1 16.5 1.0
CD2 A:HIS120 3.2 15.4 1.0
CHC A:HEC201 3.4 19.0 1.0
CHD A:HEC201 3.4 16.0 1.0
CHB A:HEC201 3.4 17.6 1.0
CHA A:HEC201 3.4 15.0 1.0
ND1 A:HIS120 4.2 13.8 1.0
C2A A:HEC201 4.3 14.3 1.0
C3B A:HEC201 4.3 16.9 1.0
C2B A:HEC201 4.3 17.3 1.0
C2C A:HEC201 4.3 16.0 1.0
C3A A:HEC201 4.3 13.7 1.0
C3C A:HEC201 4.3 15.8 1.0
CG A:HIS120 4.3 16.0 1.0
C2D A:HEC201 4.3 15.6 1.0
C3D A:HEC201 4.3 14.6 1.0
CZ A:PHE29 4.6 26.8 1.0
CE2 A:PHE29 4.9 29.3 1.0

Reference:

T.Yoshimi, S.Fujii, H.Oki, T.Igawa, H.R.Adams, K.Ueda, K.Kawahara, T.Ohkubo, M.A.Hough, Y.Sambongi. Crystal Structure of Thermally Stable Homodimeric Cytochrome C'-Beta From Thermus Thermophilus. Acta Crystallogr.,Sect.F V. 78 217 2022.
ISSN: ESSN 2053-230X
PubMed: 35647678
DOI: 10.1107/S2053230X22005088
Page generated: Thu Aug 8 04:59:45 2024

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