Iron in PDB 7ew6: Barley Photosystem I-Lhci-LHCA5 Supercomplex

All present enzymatic activity of Barley Photosystem I-Lhci-LHCA5 Supercomplex:
1.97.1.12;

The structure of Barley Photosystem I-Lhci-LHCA5 Supercomplex also contains other interesting chemical elements:

Magnesium

(Mg)

149 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Iron atom in the Barley Photosystem I-Lhci-LHCA5 Supercomplex (pdb code 7ew6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the Barley Photosystem I-Lhci-LHCA5 Supercomplex, PDB code: 7ew6:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe850 b:81.2 occ:1.00 FE1 A:SF4850 0.0 81.2 1.0 S4 A:SF4850 2.1 81.2 1.0 S2 A:SF4850 2.1 81.2 1.0 S3 A:SF4850 2.1 81.2 1.0 SG A:CYS573 2.3 69.5 1.0 FE3 A:SF4850 2.5 81.2 1.0 FE2 A:SF4850 2.6 81.2 1.0 FE4 A:SF4850 2.6 81.2 1.0 CB A:CYS573 2.9 69.5 1.0 S1 A:SF4850 3.6 81.2 1.0 N A:GLY575 4.2 67.8 1.0 CA A:GLY575 4.3 67.8 1.0 C A:GLY575 4.4 67.8 1.0 CA A:CYS573 4.4 69.5 1.0 SG A:CYS582 4.5 68.7 1.0 O A:GLY575 4.6 67.8 1.0 SG B:CYS568 4.6 71.0 1.0 SG B:CYS559 4.6 70.2 1.0 CA A:CYS582 4.9 68.7 1.0 N B:PRO562 4.9 71.6 1.0 N A:PRO576 4.9 66.4 1.0 C A:CYS573 5.0 69.5 1.0

Iron binding site 2 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe850 b:81.2 occ:1.00 FE2 A:SF4850 0.0 81.2 1.0 S3 A:SF4850 2.1 81.2 1.0 S1 A:SF4850 2.1 81.2 1.0 S4 A:SF4850 2.1 81.2 1.0 SG B:CYS568 2.2 71.0 1.0 FE4 A:SF4850 2.5 81.2 1.0 FE3 A:SF4850 2.6 81.2 1.0 FE1 A:SF4850 2.6 81.2 1.0 CB B:CYS568 3.4 71.0 1.0 S2 A:SF4850 3.6 81.2 1.0 CA B:CYS568 3.9 71.0 1.0 N B:CYS568 4.2 71.0 1.0 CZ3 B:TRP667 4.4 68.3 1.0 SG B:CYS559 4.5 70.2 1.0 SG A:CYS582 4.6 68.7 1.0 SG A:CYS573 4.6 69.5 1.0 CB B:CYS559 4.6 70.2 1.0 CE3 B:TRP667 5.0 68.3 1.0

Iron binding site 3 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe850 b:81.2 occ:1.00 FE3 A:SF4850 0.0 81.2 1.0 S4 A:SF4850 2.1 81.2 1.0 S1 A:SF4850 2.1 81.2 1.0 S2 A:SF4850 2.1 81.2 1.0 SG A:CYS582 2.2 68.7 1.0 FE1 A:SF4850 2.5 81.2 1.0 FE2 A:SF4850 2.6 81.2 1.0 FE4 A:SF4850 2.6 81.2 1.0 CB A:CYS582 3.3 68.7 1.0 S3 A:SF4850 3.6 81.2 1.0 CA A:CYS582 3.9 68.7 1.0 N A:CYS582 4.2 68.7 1.0 CB A:CYS573 4.4 69.5 1.0 CD1 B:ILE702 4.4 67.7 1.0 CE3 B:TRP667 4.5 68.3 1.0 SG A:CYS573 4.5 69.5 1.0 SG B:CYS568 4.6 71.0 1.0 CZ3 B:TRP667 4.6 68.3 1.0 SG B:CYS559 4.6 70.2 1.0

Iron binding site 4 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe850 b:81.2 occ:1.00 FE4 A:SF4850 0.0 81.2 1.0 S1 A:SF4850 2.1 81.2 1.0 S2 A:SF4850 2.1 81.2 1.0 S3 A:SF4850 2.2 81.2 1.0 SG B:CYS559 2.2 70.2 1.0 FE2 A:SF4850 2.5 81.2 1.0 FE3 A:SF4850 2.6 81.2 1.0 FE1 A:SF4850 2.6 81.2 1.0 CB B:CYS559 3.1 70.2 1.0 S4 A:SF4850 3.6 81.2 1.0 N B:GLY561 4.4 71.9 1.0 CB A:PRO576 4.5 66.4 1.0 SG B:CYS568 4.5 71.0 1.0 N A:PRO576 4.5 66.4 1.0 CD A:PRO576 4.5 66.4 1.0 CA B:CYS559 4.6 70.2 1.0 SG A:CYS582 4.6 68.7 1.0 SG A:CYS573 4.6 69.5 1.0 CA B:GLY561 4.7 71.9 1.0 C A:GLY575 4.8 67.8 1.0 CA A:PRO576 4.8 66.4 1.0 CG A:PRO576 4.9 66.4 1.0 C B:GLY561 4.9 71.9 1.0 CA B:CYS568 4.9 71.0 1.0 CD1 B:ILE702 5.0 67.7 1.0

Iron binding site 5 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:83.1 occ:1.00 FE1 C:SF4101 0.0 83.1 1.0 S4 C:SF4101 2.1 83.1 1.0 S2 C:SF4101 2.2 83.1 1.0 S3 C:SF4101 2.2 83.1 1.0 SG C:CYS51 2.3 68.4 1.0 FE2 C:SF4101 2.5 83.1 1.0 FE3 C:SF4101 2.6 83.1 1.0 FE4 C:SF4101 2.6 83.1 1.0 O C:CYS51 3.0 68.4 1.0 N C:CYS51 3.6 68.4 1.0 S1 C:SF4101 3.6 83.1 1.0 CB C:CYS51 3.7 68.4 1.0 C C:CYS51 3.7 68.4 1.0 CD C:PRO22 3.9 68.9 1.0 CA C:CYS51 3.9 68.4 1.0 N C:GLY50 4.2 68.0 1.0 CB C:CYS54 4.3 71.1 1.0 C C:GLY50 4.4 68.0 1.0 CG C:PRO22 4.4 68.9 1.0 SG C:CYS21 4.5 67.5 1.0 SG C:CYS54 4.6 71.1 1.0 SG C:CYS48 4.6 70.6 1.0 N C:VAL49 4.6 66.2 1.0 CA C:GLY50 4.7 68.0 1.0 N C:CYS54 4.8 71.1 1.0 N C:LYS52 4.9 72.4 1.0

Iron binding site 6 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:83.1 occ:1.00 FE2 C:SF4101 0.0 83.1 1.0 S4 C:SF4101 2.1 83.1 1.0 S3 C:SF4101 2.1 83.1 1.0 S1 C:SF4101 2.1 83.1 1.0 SG C:CYS21 2.2 67.5 1.0 FE1 C:SF4101 2.5 83.1 1.0 FE3 C:SF4101 2.6 83.1 1.0 FE4 C:SF4101 2.6 83.1 1.0 CB C:CYS21 3.5 67.5 1.0 S2 C:SF4101 3.7 83.1 1.0 CA C:CYS21 3.8 67.5 1.0 CG2 C:VAL25 3.9 70.4 1.0 CB C:CYS54 3.9 71.1 1.0 CD C:PRO22 4.0 68.9 1.0 CB C:VAL25 4.2 70.4 1.0 SG C:CYS51 4.6 68.4 1.0 SG C:CYS48 4.6 70.6 1.0 SG C:CYS54 4.6 71.1 1.0 N C:PRO22 4.6 68.9 1.0 C C:CYS21 4.6 67.5 1.0 OG1 C:THR23 4.8 70.9 1.0 N C:VAL25 5.0 70.4 1.0

Iron binding site 7 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:83.1 occ:1.00 FE3 C:SF4101 0.0 83.1 1.0 S1 C:SF4101 2.1 83.1 1.0 S2 C:SF4101 2.1 83.1 1.0 S4 C:SF4101 2.1 83.1 1.0 SG C:CYS54 2.2 71.1 1.0 CB C:CYS54 2.4 71.1 1.0 FE4 C:SF4101 2.5 83.1 1.0 FE1 C:SF4101 2.6 83.1 1.0 FE2 C:SF4101 2.6 83.1 1.0 O C:CYS51 3.6 68.4 1.0 S3 C:SF4101 3.6 83.1 1.0 CA C:CYS54 3.7 71.1 1.0 N C:CYS54 3.9 71.1 1.0 CG2 C:VAL67 4.4 72.6 1.0 C C:CYS51 4.5 68.4 1.0 SG C:CYS48 4.5 70.6 1.0 SG C:CYS21 4.6 67.5 1.0 SG C:CYS51 4.6 68.4 1.0 C C:CYS54 4.7 71.1 1.0

Iron binding site 8 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:83.1 occ:1.00 FE4 C:SF4101 0.0 83.1 1.0 S1 C:SF4101 2.1 83.1 1.0 S2 C:SF4101 2.1 83.1 1.0 S3 C:SF4101 2.1 83.1 1.0 SG C:CYS48 2.2 70.6 1.0 FE3 C:SF4101 2.5 83.1 1.0 FE2 C:SF4101 2.6 83.1 1.0 FE1 C:SF4101 2.6 83.1 1.0 CB C:CYS48 3.5 70.6 1.0 S4 C:SF4101 3.7 83.1 1.0 CA C:CYS48 3.8 70.6 1.0 N C:GLY50 3.9 68.0 1.0 N C:VAL49 4.0 66.2 1.0 C C:CYS48 4.1 70.6 1.0 CG2 C:VAL25 4.4 70.4 1.0 CA C:GLY50 4.5 68.0 1.0 SG C:CYS54 4.5 71.1 1.0 SG C:CYS21 4.6 67.5 1.0 SG C:CYS51 4.6 68.4 1.0 CG2 C:VAL5 4.6 72.8 1.0 N C:CYS51 4.7 68.4 1.0 O C:CYS51 4.8 68.4 1.0 CB C:CYS54 4.9 71.1 1.0 C C:GLY50 4.9 68.0 1.0 O C:CYS48 4.9 70.6 1.0 CB C:VAL25 4.9 70.4 1.0 C C:VAL49 5.0 66.2 1.0

Iron binding site 9 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe102 b:83.1 occ:1.00 FE1 C:SF4102 0.0 83.1 1.0 S2 C:SF4102 2.1 83.1 1.0 S4 C:SF4102 2.1 83.1 1.0 S3 C:SF4102 2.2 83.1 1.0 SG C:CYS58 2.2 71.0 1.0 FE3 C:SF4102 2.5 83.1 1.0 FE4 C:SF4102 2.6 83.1 1.0 FE2 C:SF4102 2.6 83.1 1.0 CB C:CYS58 3.2 71.0 1.0 CA C:CYS58 3.6 71.0 1.0 S1 C:SF4102 3.7 83.1 1.0 CB C:SER64 4.1 71.8 1.0 CD C:PRO59 4.4 70.4 1.0 C C:CYS58 4.4 71.0 1.0 CG1 C:VAL65 4.4 71.5 1.0 SG C:CYS14 4.5 69.5 1.0 SG C:CYS11 4.6 74.4 1.0 SG C:CYS17 4.6 72.5 1.0 N C:PRO59 4.7 70.4 1.0 N C:VAL65 4.7 71.5 1.0 CB C:CYS11 4.8 74.4 1.0 O C:ALA57 4.8 70.7 1.0 N C:CYS58 4.8 71.0 1.0 C C:SER64 4.9 71.8 1.0 CB C:CYS17 4.9 72.5 1.0 CA C:SER64 4.9 71.8 1.0 OG C:SER64 4.9 71.8 1.0 N C:SER64 4.9 71.8 1.0 CA C:CYS11 5.0 74.4 1.0

Iron binding site 10 out of 12 in the Barley Photosystem I-Lhci-LHCA5 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Barley Photosystem I-Lhci-LHCA5 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe102 b:83.1 occ:1.00 FE2 C:SF4102 0.0 83.1 1.0 S3 C:SF4102 2.1 83.1 1.0 S1 C:SF4102 2.1 83.1 1.0 S4 C:SF4102 2.1 83.1 1.0 SG C:CYS17 2.3 72.5 1.0 FE4 C:SF4102 2.5 83.1 1.0 FE3 C:SF4102 2.6 83.1 1.0 FE1 C:SF4102 2.6 83.1 1.0 CB C:CYS17 3.1 72.5 1.0 S2 C:SF4102 3.6 83.1 1.0 N C:CYS17 3.7 72.5 1.0 CA C:CYS17 4.0 72.5 1.0 CB C:ALA40 4.2 73.1 1.0 SG C:CYS11 4.5 74.4 1.0 N C:GLN16 4.6 68.1 1.0 SG C:CYS14 4.6 69.5 1.0 SG C:CYS58 4.6 71.0 1.0 CE C:MET28 4.7 71.9 1.0 CG1 C:VAL65 4.7 71.5 1.0 C C:GLN16 4.8 68.1 1.0 N C:THR15 4.9 67.7 1.0 N C:VAL18 4.9 69.5 1.0 CB C:CYS58 5.0 71.0 1.0 C C:CYS17 5.0 72.5 1.0

L.Shen, K.Tang, W.Wang, C.Wang, H.Wu, Z.Mao, S.An, S.Chang, T.Kuang, J.R.Shen, G.Han, X.Zhang. Architecture of the Chloroplast Psi-Ndh Supercomplex in Hordeum Vulgare. Nature 2021.
ISSN: ESSN 1476-4687
PubMed: 34879391
DOI: 10.1038/S41586-021-04277-6