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Iron in PDB 7jor: Neutron Structure of Ferric Dehaloperoxidase B

Iron Binding Sites:

The binding sites of Iron atom in the Neutron Structure of Ferric Dehaloperoxidase B (pdb code 7jor). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Neutron Structure of Ferric Dehaloperoxidase B, PDB code: 7jor:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7jor

Go back to Iron Binding Sites List in 7jor
Iron binding site 1 out of 2 in the Neutron Structure of Ferric Dehaloperoxidase B


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Neutron Structure of Ferric Dehaloperoxidase B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:19.8
occ:1.00
FE A:HEM201 0.0 19.8 1.0
ND A:HEM201 1.9 20.7 1.0
NA A:HEM201 2.0 21.2 1.0
NC A:HEM201 2.1 18.4 1.0
NB A:HEM201 2.1 18.7 1.0
NE2 A:HIS89 2.4 24.5 1.0
H12 A:PG0202 2.5 21.8 0.7
C1D A:HEM201 2.8 19.1 1.0
C4D A:HEM201 2.8 23.3 1.0
C1A A:HEM201 2.9 21.1 1.0
C4A A:HEM201 3.0 21.8 1.0
C1B A:HEM201 3.0 19.5 1.0
C4C A:HEM201 3.0 19.9 1.0
OTT A:PG0202 3.0 19.0 0.7
C1 A:PG0202 3.1 18.2 0.7
C4B A:HEM201 3.1 19.4 1.0
DD2 A:HIS89 3.1 27.5 1.0
C1C A:HEM201 3.1 18.5 1.0
CD2 A:HIS89 3.1 22.9 1.0
CHD A:HEM201 3.3 20.2 1.0
CHA A:HEM201 3.3 23.7 1.0
H11 A:PG0202 3.3 21.8 0.7
CHB A:HEM201 3.4 20.8 1.0
DG21 A:VAL59 3.5 24.5 1.0
CHC A:HEM201 3.5 19.0 1.0
CE1 A:HIS89 3.5 24.5 1.0
DG11 A:VAL59 3.6 23.7 1.0
DTT A:PG0202 3.8 22.8 0.3
HTT A:PG0202 3.8 22.8 0.7
DE1 A:MET86 3.8 33.3 1.0
DE1 A:HIS89 3.9 29.4 1.0
C2D A:HEM201 4.1 22.7 1.0
C3D A:HEM201 4.1 23.1 1.0
C2A A:HEM201 4.1 23.5 1.0
C3A A:HEM201 4.2 22.7 1.0
HHD A:HEM201 4.2 24.2 1.0
HHA A:HEM201 4.2 28.5 1.0
C2B A:HEM201 4.2 20.7 1.0
C3C A:HEM201 4.3 19.2 1.0
C2C A:HEM201 4.3 16.7 1.0
HHB A:HEM201 4.3 24.9 1.0
C3B A:HEM201 4.3 18.6 1.0
CG A:HIS89 4.4 23.0 1.0
C2 A:PG0202 4.4 19.2 0.7
HHC A:HEM201 4.4 22.8 1.0
H22 A:PG0202 4.5 23.0 0.7
ND1 A:HIS89 4.5 22.3 1.0
DE1 A:HIS55 4.6 24.3 1.0
CG2 A:VAL59 4.6 20.4 1.0
CG1 A:VAL59 4.6 19.8 1.0
DD11 A:LEU92 4.6 28.0 1.0
DG13 A:VAL59 4.8 23.7 1.0
CE A:MET86 4.8 27.8 1.0
DG22 A:VAL59 4.9 24.5 1.0
O1 A:PG0202 4.9 18.8 0.7
DE2 A:PHE35 5.0 22.2 1.0

Iron binding site 2 out of 2 in 7jor

Go back to Iron Binding Sites List in 7jor
Iron binding site 2 out of 2 in the Neutron Structure of Ferric Dehaloperoxidase B


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Neutron Structure of Ferric Dehaloperoxidase B within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:23.6
occ:0.66
FE B:HEM201 0.0 23.6 0.7
ND B:HEM201 1.9 23.9 0.7
NA B:HEM201 2.0 25.0 0.7
NC B:HEM201 2.1 24.8 0.7
NE2 B:HIS55 2.1 24.2 1.0
NB B:HEM201 2.1 24.2 0.7
C4D B:HEM201 2.9 24.8 0.7
C1D B:HEM201 2.9 24.8 0.7
NE2 B:HIS89 2.9 26.0 1.0
CD2 B:HIS55 2.9 24.9 1.0
C1A B:HEM201 2.9 28.2 0.7
C4C B:HEM201 3.0 26.1 0.7
DD2 B:HIS55 3.0 29.9 1.0
C4A B:HEM201 3.0 23.7 0.7
C1B B:HEM201 3.1 23.9 0.7
C4B B:HEM201 3.1 22.3 0.7
C1C B:HEM201 3.1 23.4 0.7
CE1 B:HIS55 3.1 22.6 1.0
CHA B:HEM201 3.3 26.5 0.7
DD2 B:HIS89 3.3 33.6 1.0
CHD B:HEM201 3.4 25.5 0.7
DE1 B:HIS55 3.4 27.1 1.0
CHB B:HEM201 3.5 21.7 0.7
CD2 B:HIS89 3.5 28.0 1.0
CHC B:HEM201 3.5 23.8 0.7
DG22 B:VAL59 4.0 22.4 1.0
CE1 B:HIS89 4.1 27.6 1.0
CG B:HIS55 4.1 24.7 1.0
C3D B:HEM201 4.1 27.6 0.7
C2D B:HEM201 4.1 27.0 0.7
C2A B:HEM201 4.1 28.9 0.7
ND1 B:HIS55 4.2 21.3 1.0
C3A B:HEM201 4.2 25.9 0.7
HHA B:HEM201 4.2 31.8 0.7
C3C B:HEM201 4.2 27.5 0.7
HHD B:HEM201 4.3 30.6 0.7
C2C B:HEM201 4.3 25.6 0.7
C2B B:HEM201 4.3 22.2 0.7
C3B B:HEM201 4.3 22.0 0.7
HHB B:HEM201 4.4 26.0 0.7
HHC B:HEM201 4.4 28.6 0.7
DE1 B:HIS89 4.4 33.1 1.0
DD11 B:LEU92 4.5 35.3 1.0
DB3 B:GLN88 4.5 39.5 1.0
DE1 B:PHE35 4.6 28.6 1.0
DE2 B:MET86 4.6 33.7 1.0
DG23 B:VAL59 4.7 22.4 1.0
CG2 B:VAL59 4.7 18.7 1.0
DG21 B:VAL59 4.7 22.4 1.0
CG B:HIS89 4.8 30.4 1.0
DD1 B:HIS55 5.0 25.5 0.7
HD1 B:HIS55 5.0 25.5 0.3

Reference:

L.M.Carey, R.A.Ghiladi, F.Meilleur, D.A.A.Myles. Neutron Structure of Ferric Dehaloperoxidase B To Be Published.
Page generated: Thu Aug 8 05:47:46 2024

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