Iron in PDB 7lq5: Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
24;
Binding sites:
The binding sites of Iron atom in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
(pdb code 7lq5). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 24 binding sites of Iron where determined in the
Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens, PDB code: 7lq5:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 1 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe301
b:48.7
occ:1.00
|
FE
|
A:HEC301
|
0.0
|
48.7
|
1.0
|
|
ND
|
A:HEC301
|
2.0
|
48.7
|
1.0
|
|
NB
|
A:HEC301
|
2.0
|
48.7
|
1.0
|
|
NC
|
A:HEC301
|
2.0
|
48.7
|
1.0
|
|
NA
|
A:HEC301
|
2.0
|
48.7
|
1.0
|
|
NE2
|
A:HIS96
|
2.1
|
44.5
|
1.0
|
|
NE2
|
A:HIS30
|
2.3
|
51.7
|
1.0
|
|
CD2
|
A:HIS96
|
3.0
|
44.5
|
1.0
|
|
C4D
|
A:HEC301
|
3.0
|
48.7
|
1.0
|
|
C1A
|
A:HEC301
|
3.0
|
48.7
|
1.0
|
|
C1C
|
A:HEC301
|
3.0
|
48.7
|
1.0
|
|
C4B
|
A:HEC301
|
3.0
|
48.7
|
1.0
|
|
C1B
|
A:HEC301
|
3.1
|
48.7
|
1.0
|
|
C1D
|
A:HEC301
|
3.1
|
48.7
|
1.0
|
|
C4C
|
A:HEC301
|
3.1
|
48.7
|
1.0
|
|
C4A
|
A:HEC301
|
3.1
|
48.7
|
1.0
|
|
CE1
|
A:HIS96
|
3.2
|
44.5
|
1.0
|
|
CE1
|
A:HIS30
|
3.2
|
51.7
|
1.0
|
|
CD2
|
A:HIS30
|
3.3
|
51.7
|
1.0
|
|
CHA
|
A:HEC301
|
3.3
|
48.7
|
1.0
|
|
CHC
|
A:HEC301
|
3.4
|
48.7
|
1.0
|
|
CHB
|
A:HEC301
|
3.5
|
48.7
|
1.0
|
|
CHD
|
A:HEC301
|
3.5
|
48.7
|
1.0
|
|
CG
|
A:HIS96
|
4.2
|
44.5
|
1.0
|
|
C2A
|
A:HEC301
|
4.2
|
48.7
|
1.0
|
|
C3D
|
A:HEC301
|
4.2
|
48.7
|
1.0
|
|
ND1
|
A:HIS96
|
4.2
|
44.5
|
1.0
|
|
C3B
|
A:HEC301
|
4.2
|
48.7
|
1.0
|
|
C2B
|
A:HEC301
|
4.3
|
48.7
|
1.0
|
|
C2C
|
A:HEC301
|
4.3
|
48.7
|
1.0
|
|
C2D
|
A:HEC301
|
4.3
|
48.7
|
1.0
|
|
C3C
|
A:HEC301
|
4.3
|
48.7
|
1.0
|
|
C3A
|
A:HEC301
|
4.3
|
48.7
|
1.0
|
|
ND1
|
A:HIS30
|
4.4
|
51.7
|
1.0
|
|
CG
|
A:HIS30
|
4.4
|
51.7
|
1.0
|
|
CMD
|
A:HEC304
|
4.9
|
47.0
|
1.0
|
|
Iron binding site 2 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 2 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe302
b:47.8
occ:1.00
|
FE
|
A:HEC302
|
0.0
|
47.8
|
1.0
|
|
NB
|
A:HEC302
|
2.0
|
47.8
|
1.0
|
|
NC
|
A:HEC302
|
2.0
|
47.8
|
1.0
|
|
NA
|
A:HEC302
|
2.0
|
47.8
|
1.0
|
|
NE2
|
A:HIS41
|
2.0
|
49.0
|
1.0
|
|
ND
|
A:HEC302
|
2.0
|
47.8
|
1.0
|
|
NE2
|
A:HIS69
|
2.2
|
43.7
|
1.0
|
|
CD2
|
A:HIS41
|
2.9
|
49.0
|
1.0
|
|
C4C
|
A:HEC302
|
3.0
|
47.8
|
1.0
|
|
C1A
|
A:HEC302
|
3.0
|
47.8
|
1.0
|
|
C1B
|
A:HEC302
|
3.0
|
47.8
|
1.0
|
|
C4D
|
A:HEC302
|
3.0
|
47.8
|
1.0
|
|
C4B
|
A:HEC302
|
3.1
|
47.8
|
1.0
|
|
C1C
|
A:HEC302
|
3.1
|
47.8
|
1.0
|
|
CE1
|
A:HIS41
|
3.1
|
49.0
|
1.0
|
|
C1D
|
A:HEC302
|
3.1
|
47.8
|
1.0
|
|
C4A
|
A:HEC302
|
3.1
|
47.8
|
1.0
|
|
CE1
|
A:HIS69
|
3.2
|
43.7
|
1.0
|
|
CD2
|
A:HIS69
|
3.2
|
43.7
|
1.0
|
|
CHA
|
A:HEC302
|
3.4
|
47.8
|
1.0
|
|
CHD
|
A:HEC302
|
3.4
|
47.8
|
1.0
|
|
CHC
|
A:HEC302
|
3.4
|
47.8
|
1.0
|
|
CHB
|
A:HEC302
|
3.4
|
47.8
|
1.0
|
|
CG
|
A:HIS41
|
4.1
|
49.0
|
1.0
|
|
ND1
|
A:HIS41
|
4.1
|
49.0
|
1.0
|
|
C2B
|
A:HEC302
|
4.2
|
47.8
|
1.0
|
|
C3C
|
A:HEC302
|
4.2
|
47.8
|
1.0
|
|
C2A
|
A:HEC302
|
4.3
|
47.8
|
1.0
|
|
C3B
|
A:HEC302
|
4.3
|
47.8
|
1.0
|
|
C3D
|
A:HEC302
|
4.3
|
47.8
|
1.0
|
|
C2C
|
A:HEC302
|
4.3
|
47.8
|
1.0
|
|
C2D
|
A:HEC302
|
4.3
|
47.8
|
1.0
|
|
C3A
|
A:HEC302
|
4.3
|
47.8
|
1.0
|
|
ND1
|
A:HIS69
|
4.3
|
43.7
|
1.0
|
|
CG
|
A:HIS69
|
4.3
|
43.7
|
1.0
|
|
Iron binding site 3 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 3 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe303
b:47.0
occ:1.00
|
FE
|
A:HEC303
|
0.0
|
47.0
|
1.0
|
|
NA
|
A:HEC303
|
2.0
|
47.0
|
1.0
|
|
ND
|
A:HEC303
|
2.0
|
47.0
|
1.0
|
|
NB
|
A:HEC303
|
2.0
|
47.0
|
1.0
|
|
NC
|
A:HEC303
|
2.1
|
47.0
|
1.0
|
|
NE2
|
A:HIS91
|
2.2
|
48.3
|
1.0
|
|
NE2
|
A:HIS40
|
2.3
|
47.2
|
1.0
|
|
CE1
|
A:HIS91
|
2.9
|
48.3
|
1.0
|
|
C1A
|
A:HEC303
|
3.0
|
47.0
|
1.0
|
|
C4D
|
A:HEC303
|
3.0
|
47.0
|
1.0
|
|
C4B
|
A:HEC303
|
3.0
|
47.0
|
1.0
|
|
C1C
|
A:HEC303
|
3.1
|
47.0
|
1.0
|
|
C4A
|
A:HEC303
|
3.1
|
47.0
|
1.0
|
|
C1D
|
A:HEC303
|
3.1
|
47.0
|
1.0
|
|
CD2
|
A:HIS40
|
3.1
|
47.2
|
1.0
|
|
C1B
|
A:HEC303
|
3.1
|
47.0
|
1.0
|
|
C4C
|
A:HEC303
|
3.1
|
47.0
|
1.0
|
|
CHA
|
A:HEC303
|
3.3
|
47.0
|
1.0
|
|
CD2
|
A:HIS91
|
3.3
|
48.3
|
1.0
|
|
CE1
|
A:HIS40
|
3.4
|
47.2
|
1.0
|
|
CHC
|
A:HEC303
|
3.4
|
47.0
|
1.0
|
|
CHB
|
A:HEC303
|
3.5
|
47.0
|
1.0
|
|
CHD
|
A:HEC303
|
3.5
|
47.0
|
1.0
|
|
ND1
|
A:HIS91
|
4.1
|
48.3
|
1.0
|
|
C2A
|
A:HEC303
|
4.2
|
47.0
|
1.0
|
|
C3B
|
A:HEC303
|
4.2
|
47.0
|
1.0
|
|
C3D
|
A:HEC303
|
4.2
|
47.0
|
1.0
|
|
C3A
|
A:HEC303
|
4.2
|
47.0
|
1.0
|
|
C2B
|
A:HEC303
|
4.3
|
47.0
|
1.0
|
|
C2D
|
A:HEC303
|
4.3
|
47.0
|
1.0
|
|
C2C
|
A:HEC303
|
4.3
|
47.0
|
1.0
|
|
CG
|
A:HIS40
|
4.3
|
47.2
|
1.0
|
|
C3C
|
A:HEC303
|
4.3
|
47.0
|
1.0
|
|
CG
|
A:HIS91
|
4.3
|
48.3
|
1.0
|
|
ND1
|
A:HIS40
|
4.4
|
47.2
|
1.0
|
|
CMD
|
A:HEC302
|
4.6
|
47.8
|
1.0
|
|
Iron binding site 4 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 4 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe304
b:47.0
occ:1.00
|
FE
|
A:HEC304
|
0.0
|
47.0
|
1.0
|
|
NE2
|
A:HIS111
|
1.9
|
45.4
|
1.0
|
|
NC
|
A:HEC304
|
2.0
|
47.0
|
1.0
|
|
NE2
|
A:HIS97
|
2.0
|
47.1
|
1.0
|
|
ND
|
A:HEC304
|
2.0
|
47.0
|
1.0
|
|
NA
|
A:HEC304
|
2.0
|
47.0
|
1.0
|
|
NB
|
A:HEC304
|
2.1
|
47.0
|
1.0
|
|
CD2
|
A:HIS97
|
2.7
|
47.1
|
1.0
|
|
CD2
|
A:HIS111
|
2.8
|
45.4
|
1.0
|
|
CE1
|
A:HIS111
|
3.0
|
45.4
|
1.0
|
|
C4C
|
A:HEC304
|
3.0
|
47.0
|
1.0
|
|
C1C
|
A:HEC304
|
3.0
|
47.0
|
1.0
|
|
C1D
|
A:HEC304
|
3.0
|
47.0
|
1.0
|
|
C4D
|
A:HEC304
|
3.0
|
47.0
|
1.0
|
|
C1A
|
A:HEC304
|
3.1
|
47.0
|
1.0
|
|
C4A
|
A:HEC304
|
3.1
|
47.0
|
1.0
|
|
C4B
|
A:HEC304
|
3.1
|
47.0
|
1.0
|
|
C1B
|
A:HEC304
|
3.1
|
47.0
|
1.0
|
|
CE1
|
A:HIS97
|
3.2
|
47.1
|
1.0
|
|
CHD
|
A:HEC304
|
3.4
|
47.0
|
1.0
|
|
CHC
|
A:HEC304
|
3.4
|
47.0
|
1.0
|
|
CHA
|
A:HEC304
|
3.4
|
47.0
|
1.0
|
|
CHB
|
A:HEC304
|
3.5
|
47.0
|
1.0
|
|
CG
|
A:HIS111
|
3.9
|
45.4
|
1.0
|
|
CG
|
A:HIS97
|
3.9
|
47.1
|
1.0
|
|
ND1
|
A:HIS111
|
4.0
|
45.4
|
1.0
|
|
ND1
|
A:HIS97
|
4.1
|
47.1
|
1.0
|
|
C2C
|
A:HEC304
|
4.2
|
47.0
|
1.0
|
|
C3C
|
A:HEC304
|
4.2
|
47.0
|
1.0
|
|
C2D
|
A:HEC304
|
4.3
|
47.0
|
1.0
|
|
C3D
|
A:HEC304
|
4.3
|
47.0
|
1.0
|
|
C2A
|
A:HEC304
|
4.3
|
47.0
|
1.0
|
|
C3A
|
A:HEC304
|
4.3
|
47.0
|
1.0
|
|
C2B
|
A:HEC304
|
4.3
|
47.0
|
1.0
|
|
C3B
|
A:HEC304
|
4.4
|
47.0
|
1.0
|
|
Iron binding site 5 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 5 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe305
b:50.9
occ:1.00
|
FE
|
A:HEC305
|
0.0
|
50.9
|
1.0
|
|
NE2
|
A:HIS241
|
1.9
|
50.5
|
1.0
|
|
NE2
|
A:HIS158
|
2.0
|
54.8
|
1.0
|
|
NB
|
A:HEC305
|
2.0
|
50.9
|
1.0
|
|
NA
|
A:HEC305
|
2.0
|
50.9
|
1.0
|
|
NC
|
A:HEC305
|
2.1
|
50.9
|
1.0
|
|
ND
|
A:HEC305
|
2.1
|
50.9
|
1.0
|
|
CE1
|
A:HIS241
|
2.7
|
50.5
|
1.0
|
|
CD2
|
A:HIS158
|
2.9
|
54.8
|
1.0
|
|
C1B
|
A:HEC305
|
3.0
|
50.9
|
1.0
|
|
C4A
|
A:HEC305
|
3.0
|
50.9
|
1.0
|
|
C4B
|
A:HEC305
|
3.0
|
50.9
|
1.0
|
|
C1D
|
A:HEC305
|
3.0
|
50.9
|
1.0
|
|
C4C
|
A:HEC305
|
3.1
|
50.9
|
1.0
|
|
CE1
|
A:HIS158
|
3.1
|
54.8
|
1.0
|
|
C1A
|
A:HEC305
|
3.1
|
50.9
|
1.0
|
|
CD2
|
A:HIS241
|
3.1
|
50.5
|
1.0
|
|
C4D
|
A:HEC305
|
3.1
|
50.9
|
1.0
|
|
C1C
|
A:HEC305
|
3.1
|
50.9
|
1.0
|
|
CHB
|
A:HEC305
|
3.4
|
50.9
|
1.0
|
|
CHD
|
A:HEC305
|
3.4
|
50.9
|
1.0
|
|
CHC
|
A:HEC305
|
3.4
|
50.9
|
1.0
|
|
CHA
|
A:HEC305
|
3.5
|
50.9
|
1.0
|
|
ND1
|
A:HIS241
|
3.8
|
50.5
|
1.0
|
|
CG
|
A:HIS241
|
4.1
|
50.5
|
1.0
|
|
CG
|
A:HIS158
|
4.1
|
54.8
|
1.0
|
|
ND1
|
A:HIS158
|
4.1
|
54.8
|
1.0
|
|
C2B
|
A:HEC305
|
4.2
|
50.9
|
1.0
|
|
C3B
|
A:HEC305
|
4.2
|
50.9
|
1.0
|
|
C3A
|
A:HEC305
|
4.3
|
50.9
|
1.0
|
|
C2A
|
A:HEC305
|
4.3
|
50.9
|
1.0
|
|
C2D
|
A:HEC305
|
4.3
|
50.9
|
1.0
|
|
C3C
|
A:HEC305
|
4.3
|
50.9
|
1.0
|
|
C2C
|
A:HEC305
|
4.3
|
50.9
|
1.0
|
|
C3D
|
A:HEC305
|
4.3
|
50.9
|
1.0
|
|
CBC
|
A:HEC308
|
5.0
|
46.1
|
1.0
|
|
Iron binding site 6 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 6 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe306
b:64.7
occ:1.00
|
FE
|
A:HEC306
|
0.0
|
64.7
|
1.0
|
|
NE2
|
A:HIS183
|
1.8
|
56.6
|
1.0
|
|
NE2
|
A:HIS194
|
1.9
|
66.2
|
1.0
|
|
NA
|
A:HEC306
|
2.0
|
64.7
|
1.0
|
|
NC
|
A:HEC306
|
2.0
|
64.7
|
1.0
|
|
NB
|
A:HEC306
|
2.1
|
64.7
|
1.0
|
|
ND
|
A:HEC306
|
2.1
|
64.7
|
1.0
|
|
CE1
|
A:HIS183
|
2.5
|
56.6
|
1.0
|
|
CD2
|
A:HIS194
|
2.7
|
66.2
|
1.0
|
|
CE1
|
A:HIS194
|
3.0
|
66.2
|
1.0
|
|
C1A
|
A:HEC306
|
3.0
|
64.7
|
1.0
|
|
C4A
|
A:HEC306
|
3.0
|
64.7
|
1.0
|
|
C1C
|
A:HEC306
|
3.0
|
64.7
|
1.0
|
|
C4D
|
A:HEC306
|
3.0
|
64.7
|
1.0
|
|
C4B
|
A:HEC306
|
3.0
|
64.7
|
1.0
|
|
CD2
|
A:HIS183
|
3.1
|
56.6
|
1.0
|
|
C4C
|
A:HEC306
|
3.1
|
64.7
|
1.0
|
|
C1B
|
A:HEC306
|
3.1
|
64.7
|
1.0
|
|
C1D
|
A:HEC306
|
3.1
|
64.7
|
1.0
|
|
CHA
|
A:HEC306
|
3.4
|
64.7
|
1.0
|
|
CHC
|
A:HEC306
|
3.4
|
64.7
|
1.0
|
|
CHB
|
A:HEC306
|
3.4
|
64.7
|
1.0
|
|
CHD
|
A:HEC306
|
3.5
|
64.7
|
1.0
|
|
ND1
|
A:HIS183
|
3.7
|
56.6
|
1.0
|
|
CG
|
A:HIS194
|
3.9
|
66.2
|
1.0
|
|
ND1
|
A:HIS194
|
4.0
|
66.2
|
1.0
|
|
CG
|
A:HIS183
|
4.0
|
56.6
|
1.0
|
|
C2A
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
C3B
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
C3A
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
C2C
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
C3C
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
C2B
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
C3D
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
C2D
|
A:HEC306
|
4.3
|
64.7
|
1.0
|
|
Iron binding site 7 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 7 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe307
b:45.8
occ:1.00
|
FE
|
A:HEC307
|
0.0
|
45.8
|
1.0
|
|
ND
|
A:HEC307
|
2.0
|
45.8
|
1.0
|
|
NA
|
A:HEC307
|
2.0
|
45.8
|
1.0
|
|
NC
|
A:HEC307
|
2.0
|
45.8
|
1.0
|
|
NB
|
A:HEC307
|
2.0
|
45.8
|
1.0
|
|
NE2
|
A:HIS209
|
2.1
|
47.0
|
1.0
|
|
NE2
|
A:HIS182
|
2.3
|
49.3
|
1.0
|
|
CD2
|
A:HIS209
|
2.7
|
47.0
|
1.0
|
|
C1A
|
A:HEC307
|
3.0
|
45.8
|
1.0
|
|
C4D
|
A:HEC307
|
3.0
|
45.8
|
1.0
|
|
C1C
|
A:HEC307
|
3.0
|
45.8
|
1.0
|
|
C1D
|
A:HEC307
|
3.0
|
45.8
|
1.0
|
|
C4B
|
A:HEC307
|
3.0
|
45.8
|
1.0
|
|
C4C
|
A:HEC307
|
3.1
|
45.8
|
1.0
|
|
C1B
|
A:HEC307
|
3.1
|
45.8
|
1.0
|
|
C4A
|
A:HEC307
|
3.1
|
45.8
|
1.0
|
|
CE1
|
A:HIS182
|
3.2
|
49.3
|
1.0
|
|
CD2
|
A:HIS182
|
3.2
|
49.3
|
1.0
|
|
CHA
|
A:HEC307
|
3.3
|
45.8
|
1.0
|
|
CE1
|
A:HIS209
|
3.4
|
47.0
|
1.0
|
|
CHC
|
A:HEC307
|
3.4
|
45.8
|
1.0
|
|
CHD
|
A:HEC307
|
3.4
|
45.8
|
1.0
|
|
CHB
|
A:HEC307
|
3.5
|
45.8
|
1.0
|
|
CG
|
A:HIS209
|
4.0
|
47.0
|
1.0
|
|
C2A
|
A:HEC307
|
4.2
|
45.8
|
1.0
|
|
C2C
|
A:HEC307
|
4.2
|
45.8
|
1.0
|
|
C2D
|
A:HEC307
|
4.3
|
45.8
|
1.0
|
|
ND1
|
A:HIS209
|
4.3
|
47.0
|
1.0
|
|
C3D
|
A:HEC307
|
4.3
|
45.8
|
1.0
|
|
C3A
|
A:HEC307
|
4.3
|
45.8
|
1.0
|
|
C3C
|
A:HEC307
|
4.3
|
45.8
|
1.0
|
|
C3B
|
A:HEC307
|
4.3
|
45.8
|
1.0
|
|
ND1
|
A:HIS182
|
4.3
|
49.3
|
1.0
|
|
C2B
|
A:HEC307
|
4.3
|
45.8
|
1.0
|
|
CG
|
A:HIS182
|
4.3
|
49.3
|
1.0
|
|
CMB
|
A:HEC305
|
5.0
|
50.9
|
1.0
|
|
Iron binding site 8 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 8 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe308
b:46.1
occ:1.00
|
FE
|
A:HEC308
|
0.0
|
46.1
|
1.0
|
|
NC
|
A:HEC308
|
2.0
|
46.1
|
1.0
|
|
NB
|
A:HEC308
|
2.0
|
46.1
|
1.0
|
|
NA
|
A:HEC308
|
2.1
|
46.1
|
1.0
|
|
NE2
|
A:HIS215
|
2.1
|
43.2
|
1.0
|
|
ND
|
A:HEC308
|
2.1
|
46.1
|
1.0
|
|
NE2
|
A:HIS252
|
2.1
|
48.0
|
1.0
|
|
CD2
|
A:HIS252
|
2.8
|
48.0
|
1.0
|
|
CE1
|
A:HIS215
|
3.0
|
43.2
|
1.0
|
|
C1C
|
A:HEC308
|
3.0
|
46.1
|
1.0
|
|
C4B
|
A:HEC308
|
3.0
|
46.1
|
1.0
|
|
C4C
|
A:HEC308
|
3.0
|
46.1
|
1.0
|
|
C1B
|
A:HEC308
|
3.1
|
46.1
|
1.0
|
|
C1D
|
A:HEC308
|
3.1
|
46.1
|
1.0
|
|
C1A
|
A:HEC308
|
3.1
|
46.1
|
1.0
|
|
C4A
|
A:HEC308
|
3.1
|
46.1
|
1.0
|
|
C4D
|
A:HEC308
|
3.1
|
46.1
|
1.0
|
|
CD2
|
A:HIS215
|
3.1
|
43.2
|
1.0
|
|
CE1
|
A:HIS252
|
3.3
|
48.0
|
1.0
|
|
CHC
|
A:HEC308
|
3.4
|
46.1
|
1.0
|
|
CHD
|
A:HEC308
|
3.4
|
46.1
|
1.0
|
|
CHA
|
A:HEC308
|
3.5
|
46.1
|
1.0
|
|
CHB
|
A:HEC308
|
3.5
|
46.1
|
1.0
|
|
CG
|
A:HIS252
|
4.1
|
48.0
|
1.0
|
|
ND1
|
A:HIS215
|
4.1
|
43.2
|
1.0
|
|
CG
|
A:HIS215
|
4.2
|
43.2
|
1.0
|
|
C2C
|
A:HEC308
|
4.2
|
46.1
|
1.0
|
|
C3B
|
A:HEC308
|
4.2
|
46.1
|
1.0
|
|
C3C
|
A:HEC308
|
4.3
|
46.1
|
1.0
|
|
ND1
|
A:HIS252
|
4.3
|
48.0
|
1.0
|
|
C2B
|
A:HEC308
|
4.3
|
46.1
|
1.0
|
|
C2A
|
A:HEC308
|
4.3
|
46.1
|
1.0
|
|
C3A
|
A:HEC308
|
4.3
|
46.1
|
1.0
|
|
C2D
|
A:HEC308
|
4.3
|
46.1
|
1.0
|
|
C3D
|
A:HEC308
|
4.3
|
46.1
|
1.0
|
|
Iron binding site 9 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 9 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe301
b:48.7
occ:1.00
|
FE
|
B:HEC301
|
0.0
|
48.7
|
1.0
|
|
ND
|
B:HEC301
|
2.0
|
48.7
|
1.0
|
|
NB
|
B:HEC301
|
2.0
|
48.7
|
1.0
|
|
NC
|
B:HEC301
|
2.0
|
48.7
|
1.0
|
|
NA
|
B:HEC301
|
2.0
|
48.7
|
1.0
|
|
NE2
|
B:HIS96
|
2.1
|
44.5
|
1.0
|
|
NE2
|
B:HIS30
|
2.3
|
51.7
|
1.0
|
|
CD2
|
B:HIS96
|
3.0
|
44.5
|
1.0
|
|
C4D
|
B:HEC301
|
3.0
|
48.7
|
1.0
|
|
C1A
|
B:HEC301
|
3.0
|
48.7
|
1.0
|
|
C1C
|
B:HEC301
|
3.0
|
48.7
|
1.0
|
|
C4B
|
B:HEC301
|
3.0
|
48.7
|
1.0
|
|
C1B
|
B:HEC301
|
3.1
|
48.7
|
1.0
|
|
C1D
|
B:HEC301
|
3.1
|
48.7
|
1.0
|
|
C4C
|
B:HEC301
|
3.1
|
48.7
|
1.0
|
|
C4A
|
B:HEC301
|
3.1
|
48.7
|
1.0
|
|
CE1
|
B:HIS96
|
3.2
|
44.5
|
1.0
|
|
CE1
|
B:HIS30
|
3.2
|
51.7
|
1.0
|
|
CD2
|
B:HIS30
|
3.3
|
51.7
|
1.0
|
|
CHA
|
B:HEC301
|
3.3
|
48.7
|
1.0
|
|
CHC
|
B:HEC301
|
3.4
|
48.7
|
1.0
|
|
CHB
|
B:HEC301
|
3.5
|
48.7
|
1.0
|
|
CHD
|
B:HEC301
|
3.5
|
48.7
|
1.0
|
|
CG
|
B:HIS96
|
4.2
|
44.5
|
1.0
|
|
C2A
|
B:HEC301
|
4.2
|
48.7
|
1.0
|
|
C3D
|
B:HEC301
|
4.2
|
48.7
|
1.0
|
|
ND1
|
B:HIS96
|
4.2
|
44.5
|
1.0
|
|
C3B
|
B:HEC301
|
4.2
|
48.7
|
1.0
|
|
C2B
|
B:HEC301
|
4.3
|
48.7
|
1.0
|
|
C2C
|
B:HEC301
|
4.3
|
48.7
|
1.0
|
|
C2D
|
B:HEC301
|
4.3
|
48.7
|
1.0
|
|
C3C
|
B:HEC301
|
4.3
|
48.7
|
1.0
|
|
C3A
|
B:HEC301
|
4.3
|
48.7
|
1.0
|
|
ND1
|
B:HIS30
|
4.4
|
51.7
|
1.0
|
|
CG
|
B:HIS30
|
4.4
|
51.7
|
1.0
|
|
CMD
|
B:HEC304
|
4.9
|
47.0
|
1.0
|
|
Iron binding site 10 out
of 24 in 7lq5
Go back to
Iron Binding Sites List in 7lq5
Iron binding site 10 out
of 24 in the Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe302
b:47.8
occ:1.00
|
FE
|
B:HEC302
|
0.0
|
47.8
|
1.0
|
|
NB
|
B:HEC302
|
2.0
|
47.8
|
1.0
|
|
NC
|
B:HEC302
|
2.0
|
47.8
|
1.0
|
|
NA
|
B:HEC302
|
2.0
|
47.8
|
1.0
|
|
NE2
|
B:HIS41
|
2.0
|
49.0
|
1.0
|
|
ND
|
B:HEC302
|
2.0
|
47.8
|
1.0
|
|
NE2
|
B:HIS69
|
2.2
|
43.7
|
1.0
|
|
CD2
|
B:HIS41
|
2.9
|
49.0
|
1.0
|
|
C4C
|
B:HEC302
|
3.0
|
47.8
|
1.0
|
|
C1A
|
B:HEC302
|
3.0
|
47.8
|
1.0
|
|
C4D
|
B:HEC302
|
3.0
|
47.8
|
1.0
|
|
C1B
|
B:HEC302
|
3.0
|
47.8
|
1.0
|
|
C4B
|
B:HEC302
|
3.1
|
47.8
|
1.0
|
|
C1C
|
B:HEC302
|
3.1
|
47.8
|
1.0
|
|
CE1
|
B:HIS41
|
3.1
|
49.0
|
1.0
|
|
C1D
|
B:HEC302
|
3.1
|
47.8
|
1.0
|
|
C4A
|
B:HEC302
|
3.1
|
47.8
|
1.0
|
|
CE1
|
B:HIS69
|
3.2
|
43.7
|
1.0
|
|
CD2
|
B:HIS69
|
3.2
|
43.7
|
1.0
|
|
CHA
|
B:HEC302
|
3.4
|
47.8
|
1.0
|
|
CHD
|
B:HEC302
|
3.4
|
47.8
|
1.0
|
|
CHC
|
B:HEC302
|
3.4
|
47.8
|
1.0
|
|
CHB
|
B:HEC302
|
3.4
|
47.8
|
1.0
|
|
CG
|
B:HIS41
|
4.1
|
49.0
|
1.0
|
|
ND1
|
B:HIS41
|
4.1
|
49.0
|
1.0
|
|
C2B
|
B:HEC302
|
4.2
|
47.8
|
1.0
|
|
C3C
|
B:HEC302
|
4.2
|
47.8
|
1.0
|
|
C2A
|
B:HEC302
|
4.3
|
47.8
|
1.0
|
|
C3B
|
B:HEC302
|
4.3
|
47.8
|
1.0
|
|
C3D
|
B:HEC302
|
4.3
|
47.8
|
1.0
|
|
C2C
|
B:HEC302
|
4.3
|
47.8
|
1.0
|
|
C2D
|
B:HEC302
|
4.3
|
47.8
|
1.0
|
|
C3A
|
B:HEC302
|
4.3
|
47.8
|
1.0
|
|
ND1
|
B:HIS69
|
4.3
|
43.7
|
1.0
|
|
CG
|
B:HIS69
|
4.3
|
43.7
|
1.0
|
|
Reference:
Y.Gu,
V.Srikanth,
N.S.Malvankar,
F.A.Samatey.
Cryo-Em Structure of Omcz Nanowire From Geobacter Sulfurreducens To Be Published.
Page generated: Thu Aug 8 07:06:35 2024
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