Iron in PDB 7lx0: Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light

All present enzymatic activity of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light:
1.97.1.12;

The structure of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light also contains other interesting chemical elements:

Magnesium	(Mg)	270 atoms
Calcium	(Ca)	3 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 36;

Binding sites:

The binding sites of Iron atom in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light (pdb code 7lx0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 36 binding sites of Iron where determined in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light, PDB code: 7lx0:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe3001 b:15.3 occ:1.00 FE1 G:SF43001 0.0 15.3 1.0 SG H:CYS575 2.2 14.3 1.0 S2 G:SF43001 2.3 15.3 1.0 S4 G:SF43001 2.3 15.3 1.0 S3 G:SF43001 2.3 15.3 1.0 FE2 G:SF43001 2.7 15.3 1.0 FE3 G:SF43001 2.7 15.3 1.0 FE4 G:SF43001 2.7 15.3 1.0 CB H:CYS575 3.3 14.3 1.0 CA H:CYS575 3.6 14.3 1.0 S1 G:SF43001 3.9 15.3 1.0 N H:CYS575 4.0 14.3 1.0 CD1 G:ILE757 4.1 9.3 1.0 CZ3 H:TRP674 4.2 9.0 1.0 CB H:CYS566 4.5 15.5 1.0 SG G:CYS620 4.6 10.7 1.0 SG H:CYS566 4.7 15.5 1.0 C H:THR574 4.8 15.0 1.0 CG2 G:ILE757 4.8 9.3 1.0 SG G:CYS611 4.9 12.1 1.0 CE3 H:TRP674 4.9 9.0 1.0 CG1 G:ILE757 4.9 9.3 1.0

Iron binding site 2 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe3001 b:15.3 occ:1.00 FE2 G:SF43001 0.0 15.3 1.0 SG G:CYS620 2.2 10.7 1.0 S1 G:SF43001 2.3 15.3 1.0 S3 G:SF43001 2.3 15.3 1.0 S4 G:SF43001 2.3 15.3 1.0 FE1 G:SF43001 2.7 15.3 1.0 FE4 G:SF43001 2.7 15.3 1.0 FE3 G:SF43001 2.7 15.3 1.0 CB G:CYS620 3.4 10.7 1.0 S2 G:SF43001 3.9 15.3 1.0 CA G:CYS620 3.9 10.7 1.0 CD1 H:ILE708 4.2 11.2 1.0 N G:CYS620 4.3 10.7 1.0 CB G:CYS611 4.4 12.1 1.0 CE3 H:TRP674 4.5 9.0 1.0 SG G:CYS611 4.6 12.1 1.0 CZ3 H:TRP674 4.6 9.0 1.0 SG H:CYS566 4.6 15.5 1.0 SG H:CYS575 4.7 14.3 1.0

Iron binding site 3 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe3001 b:15.3 occ:1.00 FE3 G:SF43001 0.0 15.3 1.0 SG G:CYS611 2.2 12.1 1.0 S4 G:SF43001 2.3 15.3 1.0 S2 G:SF43001 2.3 15.3 1.0 S1 G:SF43001 2.3 15.3 1.0 FE2 G:SF43001 2.7 15.3 1.0 FE1 G:SF43001 2.7 15.3 1.0 FE4 G:SF43001 2.7 15.3 1.0 CB G:CYS611 3.0 12.1 1.0 S3 G:SF43001 3.9 15.3 1.0 CA G:CYS611 4.4 12.1 1.0 CD1 G:ILE757 4.5 9.3 1.0 N H:PRO569 4.5 15.6 1.0 CB H:PRO569 4.6 15.6 1.0 SG H:CYS575 4.6 14.3 1.0 SG G:CYS620 4.7 10.7 1.0 C H:GLY568 4.7 15.6 1.0 N G:CYS611 4.7 12.1 1.0 N G:GLY613 4.7 12.2 1.0 CD H:PRO569 4.8 15.6 1.0 CA H:PRO569 4.8 15.6 1.0 SG H:CYS566 4.8 15.5 1.0 CA G:GLY613 4.9 12.2 1.0 O H:GLY568 4.9 15.6 1.0 O G:GLY613 4.9 12.2 1.0 C G:GLY613 4.9 12.2 1.0

Iron binding site 4 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe3001 b:15.3 occ:1.00 FE4 G:SF43001 0.0 15.3 1.0 SG H:CYS566 2.2 15.5 1.0 S3 G:SF43001 2.3 15.3 1.0 S1 G:SF43001 2.3 15.3 1.0 S2 G:SF43001 2.3 15.3 1.0 FE2 G:SF43001 2.7 15.3 1.0 FE1 G:SF43001 2.7 15.3 1.0 FE3 G:SF43001 2.7 15.3 1.0 CB H:CYS566 2.9 15.5 1.0 S4 G:SF43001 3.9 15.3 1.0 CA H:CYS566 4.3 15.5 1.0 N H:GLY568 4.4 15.6 1.0 CA H:GLY568 4.5 15.6 1.0 O H:GLY568 4.5 15.6 1.0 C H:GLY568 4.6 15.6 1.0 SG G:CYS611 4.6 12.1 1.0 SG H:CYS575 4.7 14.3 1.0 SG G:CYS620 4.7 10.7 1.0 N G:PRO614 4.8 13.0 1.0 N H:CYS566 4.8 15.5 1.0 CB G:PRO614 4.8 13.0 1.0 CD G:PRO614 4.8 13.0 1.0 CD1 H:ILE708 4.8 11.2 1.0 CA H:CYS575 4.9 14.3 1.0 C G:GLY613 4.9 12.2 1.0

Iron binding site 5 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ N:Fe3002 b:23.1 occ:1.00 FE1 N:SF43002 0.0 23.1 1.0 SG N:CYS51 2.3 16.3 1.0 S2 N:SF43002 2.3 23.1 1.0 S4 N:SF43002 2.3 23.1 1.0 S3 N:SF43002 2.3 23.1 1.0 FE3 N:SF43002 2.7 23.1 1.0 FE4 N:SF43002 2.7 23.1 1.0 FE2 N:SF43002 2.7 23.1 1.0 N N:CYS51 3.6 16.3 1.0 CB N:CYS51 3.7 16.3 1.0 N N:LYS52 3.8 16.6 1.0 CD N:PRO22 3.8 23.4 1.0 S1 N:SF43002 3.9 23.1 1.0 CA N:CYS51 4.0 16.3 1.0 N N:ARG53 4.1 19.0 1.0 C N:CYS51 4.2 16.3 1.0 CG1 N:VAL49 4.4 21.8 1.0 N N:GLY50 4.4 17.5 1.0 CG N:PRO22 4.5 23.4 1.0 C N:GLY50 4.5 17.5 1.0 SG N:CYS21 4.5 23.4 1.0 CA N:LYS52 4.6 16.6 1.0 N N:CYS54 4.7 19.5 1.0 SG N:CYS48 4.7 25.6 1.0 CB N:ARG53 4.7 19.0 1.0 SG N:CYS54 4.7 19.5 1.0 C N:LYS52 4.8 16.6 1.0 CA N:GLY50 4.9 17.5 1.0 CA N:ARG53 4.9 19.0 1.0 CA N:CYS21 5.0 23.4 1.0

Iron binding site 6 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ N:Fe3002 b:23.1 occ:1.00 FE2 N:SF43002 0.0 23.1 1.0 SG N:CYS21 2.3 23.4 1.0 S3 N:SF43002 2.3 23.1 1.0 S1 N:SF43002 2.3 23.1 1.0 S4 N:SF43002 2.3 23.1 1.0 FE3 N:SF43002 2.7 23.1 1.0 FE4 N:SF43002 2.7 23.1 1.0 FE1 N:SF43002 2.7 23.1 1.0 CB N:CYS21 3.1 23.4 1.0 CA N:CYS21 3.7 23.4 1.0 S2 N:SF43002 3.9 23.1 1.0 CD N:PRO22 4.1 23.4 1.0 CB N:VAL25 4.3 27.0 1.0 CD1 N:LEU26 4.4 29.1 1.0 CB N:CYS54 4.5 19.5 1.0 CG2 N:VAL25 4.5 27.0 1.0 SG N:CYS54 4.5 19.5 1.0 C N:CYS21 4.5 23.4 1.0 CG N:LEU26 4.6 29.1 1.0 N N:PRO22 4.6 23.4 1.0 SG N:CYS51 4.7 16.3 1.0 N N:CYS21 4.8 23.4 1.0 SG N:CYS48 4.9 25.6 1.0 N N:VAL25 4.9 27.0 1.0

Iron binding site 7 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ N:Fe3002 b:23.1 occ:1.00 FE3 N:SF43002 0.0 23.1 1.0 SG N:CYS54 2.2 19.5 1.0 S4 N:SF43002 2.3 23.1 1.0 S2 N:SF43002 2.3 23.1 1.0 S1 N:SF43002 2.3 23.1 1.0 FE4 N:SF43002 2.7 23.1 1.0 FE1 N:SF43002 2.7 23.1 1.0 FE2 N:SF43002 2.7 23.1 1.0 CB N:CYS54 3.1 19.5 1.0 CG2 N:VAL67 3.7 21.2 1.0 N N:CYS54 3.7 19.5 1.0 S3 N:SF43002 3.9 23.1 1.0 CA N:CYS54 4.1 19.5 1.0 N N:LYS52 4.3 16.6 1.0 CA N:LYS52 4.3 16.6 1.0 N N:ARG53 4.4 19.0 1.0 C N:LYS52 4.6 16.6 1.0 SG N:CYS48 4.6 25.6 1.0 SG N:CYS51 4.6 16.3 1.0 CD1 N:LEU26 4.8 29.1 1.0 C N:ARG53 4.9 19.0 1.0 SG N:CYS21 4.9 23.4 1.0 CB N:VAL67 4.9 21.2 1.0

Iron binding site 8 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ N:Fe3002 b:23.1 occ:1.00 FE4 N:SF43002 0.0 23.1 1.0 SG N:CYS48 2.2 25.6 1.0 S3 N:SF43002 2.3 23.1 1.0 S2 N:SF43002 2.3 23.1 1.0 S1 N:SF43002 2.3 23.1 1.0 FE3 N:SF43002 2.7 23.1 1.0 FE1 N:SF43002 2.7 23.1 1.0 FE2 N:SF43002 2.7 23.1 1.0 CB N:CYS48 3.5 25.6 1.0 CA N:CYS48 3.8 25.6 1.0 S4 N:SF43002 3.9 23.1 1.0 N N:GLY50 4.1 17.5 1.0 N N:VAL49 4.1 21.8 1.0 CG2 N:VAL5 4.3 25.0 1.0 C N:CYS48 4.4 25.6 1.0 CG2 N:VAL25 4.5 27.0 1.0 SG N:CYS21 4.6 23.4 1.0 CA N:GLY50 4.6 17.5 1.0 CB N:VAL25 4.7 27.0 1.0 CG1 N:VAL67 4.7 21.2 1.0 CG2 N:VAL67 4.7 21.2 1.0 N N:CYS51 4.8 16.3 1.0 SG N:CYS54 4.8 19.5 1.0 SG N:CYS51 4.9 16.3 1.0 CG1 N:VAL25 4.9 27.0 1.0 CG1 N:VAL49 5.0 21.8 1.0

Iron binding site 9 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ N:Fe3003 b:33.4 occ:1.00 FE1 N:SF43003 0.0 33.4 1.0 SG N:CYS58 2.3 25.2 1.0 S4 N:SF43003 2.3 33.4 1.0 S3 N:SF43003 2.3 33.4 1.0 S2 N:SF43003 2.3 33.4 1.0 FE3 N:SF43003 2.7 33.4 1.0 FE2 N:SF43003 2.7 33.4 1.0 FE4 N:SF43003 2.7 33.4 1.0 CB N:CYS58 3.0 25.2 1.0 CA N:CYS58 3.5 25.2 1.0 S1 N:SF43003 3.9 33.4 1.0 CD N:PRO59 4.2 28.3 1.0 CG2 N:ILE65 4.2 21.7 1.0 SG N:CYS14 4.4 33.2 1.0 CB N:CYS17 4.4 28.1 1.0 CB N:SER64 4.4 25.9 1.0 C N:CYS58 4.5 25.2 1.0 SG N:CYS11 4.5 34.3 1.0 SG N:CYS17 4.6 28.1 1.0 N N:PRO59 4.6 28.3 1.0 N N:CYS58 4.6 25.2 1.0 OG N:SER64 4.8 25.9 1.0 N N:SER64 4.8 25.9 1.0 CB N:ILE65 4.9 21.7 1.0

Iron binding site 10 out of 36 in the Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light within 5.0Å range: probe atom residue distance (Å) B Occ N:Fe3003 b:33.4 occ:1.00 FE2 N:SF43003 0.0 33.4 1.0 SG N:CYS17 2.3 28.1 1.0 S4 N:SF43003 2.3 33.4 1.0 S3 N:SF43003 2.3 33.4 1.0 S1 N:SF43003 2.3 33.4 1.0 FE3 N:SF43003 2.7 33.4 1.0 FE4 N:SF43003 2.7 33.4 1.0 FE1 N:SF43003 2.7 33.4 1.0 CB N:CYS17 3.0 28.1 1.0 S2 N:SF43003 3.9 33.4 1.0 CB N:ALA40 3.9 31.3 1.0 N N:CYS17 4.0 28.1 1.0 CA N:CYS17 4.1 28.1 1.0 SG N:CYS11 4.4 34.3 1.0 CE N:MET28 4.5 39.2 1.0 SG N:CYS14 4.6 33.2 1.0 N N:GLN16 4.9 29.6 1.0 SG N:CYS58 4.9 25.2 1.0 CG2 N:ILE65 5.0 21.7 1.0 N N:THR15 5.0 31.5 1.0

C.J.Gisriel, H.L.Huang, K.M.Reiss, D.A.Flesher, V.S.Batista, D.A.Bryant, G.W.Brudvig, J.Wang. Quantitative Assessment of Chlorophyll Types in Cryo-Em Maps of Photosystem I Acclimated to Far-Red Light Bba Adv V. 1 00019 2021.
ISSN: ISSN 2667-1603
DOI: 10.1016/J.BBADVA.2021.100019