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Iron in PDB 7mjy: Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Enzymatic activity of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
All present enzymatic activity of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna:
2.8.4.3;
2.8.4.3;
Protein crystallography data
The structure of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna, PDB code: 7mjy
was solved by
O.A.Esakova,
T.L.Grove,
N.H.Yennawar,
A.J.Arcinas,
B.Wang,
C.Krebs,
S.C.Almo,
S.J.Booker,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 48.37 / 1.86 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 53.834, 79.982, 110.137, 90, 90, 90 |
| R / Rfree (%) | 17.4 / 20.9 |
Other elements in 7mjy:
The structure of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna also contains other interesting chemical elements:
| Chlorine | (Cl) | 1 atom |
Iron Binding Sites:
The binding sites of Iron atom in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
(pdb code 7mjy). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 7 binding sites of Iron where determined in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna, PDB code: 7mjy:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7;
In total 7 binding sites of Iron where determined in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna, PDB code: 7mjy:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7;
Iron binding site 1 out of 7 in 7mjy
Go back to
Iron Binding Sites List in 7mjy
Iron binding site 1 out
of 7 in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna within 5.0Å range:
|
Iron binding site 2 out of 7 in 7mjy
Go back to
Iron Binding Sites List in 7mjy
Iron binding site 2 out
of 7 in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna within 5.0Å range:
|
Iron binding site 3 out of 7 in 7mjy
Go back to
Iron Binding Sites List in 7mjy
Iron binding site 3 out
of 7 in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna within 5.0Å range:
|
Iron binding site 4 out of 7 in 7mjy
Go back to
Iron Binding Sites List in 7mjy
Iron binding site 4 out
of 7 in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna within 5.0Å range:
|
Iron binding site 5 out of 7 in 7mjy
Go back to
Iron Binding Sites List in 7mjy
Iron binding site 5 out
of 7 in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna within 5.0Å range:
|
Iron binding site 6 out of 7 in 7mjy
Go back to
Iron Binding Sites List in 7mjy
Iron binding site 6 out
of 7 in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna within 5.0Å range:
|
Iron binding site 7 out of 7 in 7mjy
Go back to
Iron Binding Sites List in 7mjy
Iron binding site 7 out
of 7 in the Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Miab in the Complex with S-Adenosyl-L-Homocysteine and Rna within 5.0Å range:
|
Reference:
O.A.Esakova,
T.L.Grove,
N.H.Yennawar,
A.J.Arcinas,
B.Wang,
C.Krebs,
S.C.Almo,
S.J.Booker.
Structural Basis For Trna Methylthiolation By the Radical Sam Enzyme Miab Nature 2021.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-021-03904-6
Page generated: Thu Aug 8 09:18:07 2024
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-021-03904-6
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