Iron in PDB 7mk8: Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol

Enzymatic activity of Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol

All present enzymatic activity of Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol:
1.14.14.1;

Protein crystallography data

The structure of Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol, PDB code: 7mk8 was solved by I.F.Sevrioukova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.67 / 2.15
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 72.29, 205.12, 156.55, 90, 90, 90
R / Rfree (%) 20.3 / 25.3

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol (pdb code 7mk8). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol, PDB code: 7mk8:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7mk8

Go back to Iron Binding Sites List in 7mk8
Iron binding site 1 out of 2 in the Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:38.6
occ:1.00
FE A:HEM601 0.0 38.6 1.0
NB A:HEM601 2.0 34.1 1.0
ND A:HEM601 2.0 37.6 1.0
NA A:HEM601 2.1 41.7 1.0
NC A:HEM601 2.1 41.5 1.0
SG A:CYS442 2.3 39.5 1.0
O A:HOH751 2.5 46.3 1.0
C4B A:HEM601 3.0 35.8 1.0
C4D A:HEM601 3.0 40.7 1.0
C1C A:HEM601 3.1 34.4 1.0
C1B A:HEM601 3.1 41.0 1.0
C1A A:HEM601 3.1 39.0 1.0
C1D A:HEM601 3.1 41.0 1.0
C4A A:HEM601 3.1 37.1 1.0
C4C A:HEM601 3.1 41.7 1.0
CB A:CYS442 3.3 40.6 1.0
CHC A:HEM601 3.4 37.3 1.0
CHA A:HEM601 3.4 34.7 1.0
CHB A:HEM601 3.5 44.0 1.0
CHD A:HEM601 3.5 41.9 1.0
CA A:CYS442 4.0 36.0 1.0
C3B A:HEM601 4.3 35.3 1.0
C3D A:HEM601 4.3 45.4 1.0
C2B A:HEM601 4.3 29.5 1.0
S1 A:DTV603 4.3 88.8 1.0
C2D A:HEM601 4.3 32.6 1.0
C2C A:HEM601 4.3 46.7 1.0
C2A A:HEM601 4.3 50.5 1.0
C3A A:HEM601 4.3 38.5 1.0
C3C A:HEM601 4.3 44.3 1.0
O A:ALA305 4.5 41.0 1.0
CB A:ALA305 4.6 27.6 1.0
C A:CYS442 4.8 36.6 1.0
N A:GLY444 4.9 40.9 1.0

Iron binding site 2 out of 2 in 7mk8

Go back to Iron Binding Sites List in 7mk8
Iron binding site 2 out of 2 in the Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of A Surface Mutant of Human Fetal-Specific CYP3A7 Bound to Dithiothreitol within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe601

b:41.3
occ:1.00
FE B:HEM601 0.0 41.3 1.0
ND B:HEM601 2.0 43.4 1.0
NA B:HEM601 2.0 43.4 1.0
NB B:HEM601 2.0 43.3 1.0
NC B:HEM601 2.1 48.9 1.0
SG B:CYS442 2.3 42.6 1.0
O B:HOH731 2.5 51.0 1.0
C4D B:HEM601 3.0 39.5 1.0
C1D B:HEM601 3.0 38.9 1.0
C1A B:HEM601 3.0 39.2 1.0
C4B B:HEM601 3.0 42.0 1.0
C4A B:HEM601 3.1 42.2 1.0
C1B B:HEM601 3.1 42.2 1.0
C1C B:HEM601 3.1 39.2 1.0
C4C B:HEM601 3.1 47.5 1.0
CB B:CYS442 3.2 40.9 1.0
CHA B:HEM601 3.4 41.8 1.0
CHC B:HEM601 3.4 38.9 1.0
CHD B:HEM601 3.4 44.8 1.0
CHB B:HEM601 3.5 41.4 1.0
CA B:CYS442 4.0 47.3 1.0
C2D B:HEM601 4.2 41.1 1.0
C3D B:HEM601 4.2 40.9 1.0
C2A B:HEM601 4.3 43.5 1.0
C3A B:HEM601 4.3 41.1 1.0
C3B B:HEM601 4.3 40.0 1.0
C2B B:HEM601 4.3 40.3 1.0
C2C B:HEM601 4.3 40.0 1.0
C3C B:HEM601 4.3 43.4 1.0
O B:ALA305 4.5 50.0 1.0
CB B:ALA305 4.7 32.9 1.0
C B:CYS442 4.7 48.6 1.0
N B:GLY444 4.9 53.8 1.0
S1 B:DTV603 4.9 98.9 1.0

Reference:

I.F.Sevrioukova, I.F.Sevrioukova. N/A N/A.
ISSN: ESSN 1422-0067
Page generated: Sat Jul 10 15:31:40 2021

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