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Iron in PDB 7nhp: Structure of Psii-I (Psii with PSB27, PSB28, and PSB34)

Enzymatic activity of Structure of Psii-I (Psii with PSB27, PSB28, and PSB34)

All present enzymatic activity of Structure of Psii-I (Psii with PSB27, PSB28, and PSB34):
1.10.3.9;

Other elements in 7nhp:

The structure of Structure of Psii-I (Psii with PSB27, PSB28, and PSB34) also contains other interesting chemical elements:

Magnesium (Mg) 35 atoms
Manganese (Mn) 1 atom
Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Psii-I (Psii with PSB27, PSB28, and PSB34) (pdb code 7nhp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Psii-I (Psii with PSB27, PSB28, and PSB34), PDB code: 7nhp:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7nhp

Go back to Iron Binding Sites List in 7nhp
Iron binding site 1 out of 2 in the Structure of Psii-I (Psii with PSB27, PSB28, and PSB34)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Psii-I (Psii with PSB27, PSB28, and PSB34) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe401

b:106.0
occ:1.00
NE2 A:HIS215 1.9 96.9 1.0
NE2 D:HIS214 1.9 93.5 1.0
OE2 D:GLU241 2.6 112.6 1.0
CD2 A:HIS215 2.6 96.9 1.0
NE2 D:HIS268 2.7 97.0 1.0
NE2 A:HIS272 2.7 102.2 1.0
CD2 D:HIS214 2.9 93.5 1.0
CE1 D:HIS214 3.0 93.5 1.0
CE1 A:HIS215 3.1 96.9 1.0
CD D:GLU241 3.4 112.6 1.0
CD2 D:HIS268 3.6 97.0 1.0
CD2 A:HIS272 3.6 102.2 1.0
CE1 A:HIS272 3.7 102.2 1.0
CE1 D:HIS268 3.7 97.0 1.0
OE1 D:GLU241 3.8 112.6 1.0
CG A:HIS215 3.8 96.9 1.0
ND1 A:HIS215 4.0 96.9 1.0
CG D:HIS214 4.0 93.5 1.0
ND1 D:HIS214 4.0 93.5 1.0
CG D:GLU241 4.5 112.6 1.0
ND1 A:HIS272 4.8 102.2 1.0
CG D:HIS268 4.8 97.0 1.0
CG A:HIS272 4.8 102.2 1.0
CG2 A:VAL219 4.8 99.6 1.0
ND1 D:HIS268 4.8 97.0 1.0
CD2 A:LEU275 5.0 98.0 1.0

Iron binding site 2 out of 2 in 7nhp

Go back to Iron Binding Sites List in 7nhp
Iron binding site 2 out of 2 in the Structure of Psii-I (Psii with PSB27, PSB28, and PSB34)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Psii-I (Psii with PSB27, PSB28, and PSB34) within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe101

b:160.1
occ:1.00
FE E:HEM101 0.0 160.1 1.0
NB E:HEM101 2.0 160.1 1.0
NA E:HEM101 2.0 160.1 1.0
NC E:HEM101 2.0 160.1 1.0
ND E:HEM101 2.0 160.1 1.0
NE2 E:HIS23 2.6 168.9 1.0
CE1 E:HIS23 2.6 168.9 1.0
NE2 F:HIS24 2.8 141.9 1.0
C1C E:HEM101 2.9 160.1 1.0
C4B E:HEM101 3.0 160.1 1.0
C1A E:HEM101 3.0 160.1 1.0
C4C E:HEM101 3.0 160.1 1.0
C4D E:HEM101 3.0 160.1 1.0
C4A E:HEM101 3.0 160.1 1.0
C1D E:HEM101 3.0 160.1 1.0
C1B E:HEM101 3.1 160.1 1.0
CHC E:HEM101 3.3 160.1 1.0
CHA E:HEM101 3.4 160.1 1.0
CD2 E:HIS23 3.4 168.9 1.0
CHD E:HEM101 3.4 160.1 1.0
CHB E:HEM101 3.4 160.1 1.0
ND1 E:HIS23 3.5 168.9 1.0
CE1 F:HIS24 3.5 141.9 1.0
CG E:HIS23 3.9 168.9 1.0
CD2 F:HIS24 3.9 141.9 1.0
C2C E:HEM101 4.1 160.1 1.0
C3C E:HEM101 4.2 160.1 1.0
C3B E:HEM101 4.2 160.1 1.0
C2A E:HEM101 4.2 160.1 1.0
C3A E:HEM101 4.2 160.1 1.0
C3D E:HEM101 4.2 160.1 1.0
C2B E:HEM101 4.3 160.1 1.0
C2D E:HEM101 4.3 160.1 1.0
NH1 E:ARG18 4.7 175.3 1.0
ND1 F:HIS24 4.7 141.9 1.0
NE1 F:TRP20 4.8 147.9 1.0
CG F:HIS24 5.0 141.9 1.0

Reference:

J.Zabret, S.Bohn, S.K.Schuller, O.Arnolds, M.Moller, J.Meier-Credo, P.Liauw, A.Chan, E.Tajkhorshid, J.D.Langer, R.Stoll, A.Krieger-Liszkay, B.D.Engel, T.Rudack, J.M.Schuller, M.M.Nowaczyk. Structural Insights Into Photosystem II Assembly. Nat.Plants V. 7 524 2021.
ISSN: ESSN 2055-0278
PubMed: 33846594
DOI: 10.1038/S41477-021-00895-0
Page generated: Thu Aug 8 09:35:25 2024

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