Iron in PDB 7o7g: Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
Protein crystallography data
The structure of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M, PDB code: 7o7g
was solved by
M.J.Edwards,
J.H.Van Wonderen,
S.E.Newton-Payne,
J.N.Butt,
T.A.Clarke,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
50.06 /
1.60
|
|
Space group
|
P 21 21 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
52.875,
89.657,
153.9,
90,
90,
90
|
|
R / Rfree (%)
|
17 /
20.5
|
Other elements in 7o7g:
The structure of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
(pdb code 7o7g). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the
Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M, PDB code: 7o7g:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 1 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe801
b:14.8
occ:1.00
|
FE
|
A:HEC801
|
0.0
|
14.8
|
1.0
|
|
NE2
|
A:HIS190
|
2.0
|
14.4
|
1.0
|
|
NE2
|
A:HIS233
|
2.0
|
15.0
|
1.0
|
|
ND
|
A:HEC801
|
2.0
|
14.4
|
1.0
|
|
NC
|
A:HEC801
|
2.0
|
14.2
|
1.0
|
|
NA
|
A:HEC801
|
2.0
|
15.0
|
1.0
|
|
NB
|
A:HEC801
|
2.0
|
13.6
|
1.0
|
|
CE1
|
A:HIS190
|
2.9
|
14.9
|
1.0
|
|
CE1
|
A:HIS233
|
3.0
|
14.4
|
1.0
|
|
C1B
|
A:HEC801
|
3.0
|
13.5
|
1.0
|
|
C1A
|
A:HEC801
|
3.0
|
15.6
|
1.0
|
|
C1D
|
A:HEC801
|
3.0
|
15.9
|
1.0
|
|
C4D
|
A:HEC801
|
3.0
|
15.3
|
1.0
|
|
C1C
|
A:HEC801
|
3.0
|
13.8
|
1.0
|
|
C4A
|
A:HEC801
|
3.1
|
14.5
|
1.0
|
|
C4C
|
A:HEC801
|
3.1
|
14.6
|
1.0
|
|
C4B
|
A:HEC801
|
3.1
|
13.7
|
1.0
|
|
CD2
|
A:HIS233
|
3.1
|
13.8
|
1.0
|
|
CD2
|
A:HIS190
|
3.1
|
14.5
|
1.0
|
|
CHB
|
A:HEC801
|
3.4
|
13.2
|
1.0
|
|
CHA
|
A:HEC801
|
3.4
|
14.5
|
1.0
|
|
CHD
|
A:HEC801
|
3.4
|
14.4
|
1.0
|
|
CHC
|
A:HEC801
|
3.4
|
13.5
|
1.0
|
|
ND1
|
A:HIS190
|
4.1
|
14.4
|
1.0
|
|
ND1
|
A:HIS233
|
4.1
|
13.8
|
1.0
|
|
CG
|
A:HIS233
|
4.2
|
14.2
|
1.0
|
|
CG
|
A:HIS190
|
4.2
|
15.2
|
1.0
|
|
C3D
|
A:HEC801
|
4.3
|
16.4
|
1.0
|
|
C2A
|
A:HEC801
|
4.3
|
16.8
|
1.0
|
|
C2D
|
A:HEC801
|
4.3
|
15.7
|
1.0
|
|
C3B
|
A:HEC801
|
4.3
|
14.6
|
1.0
|
|
C3A
|
A:HEC801
|
4.3
|
15.5
|
1.0
|
|
C3C
|
A:HEC801
|
4.3
|
14.9
|
1.0
|
|
C2B
|
A:HEC801
|
4.3
|
13.8
|
1.0
|
|
C2C
|
A:HEC801
|
4.4
|
13.8
|
1.0
|
|
Iron binding site 2 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 2 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe802
b:14.2
occ:1.00
|
FE
|
A:HEC802
|
0.0
|
14.2
|
1.0
|
|
NA
|
A:HEC802
|
2.0
|
13.8
|
1.0
|
|
NC
|
A:HEC802
|
2.0
|
14.7
|
1.0
|
|
NE2
|
A:HIS210
|
2.0
|
13.6
|
1.0
|
|
NE2
|
A:HIS198
|
2.0
|
14.1
|
1.0
|
|
NB
|
A:HEC802
|
2.0
|
13.2
|
1.0
|
|
ND
|
A:HEC802
|
2.1
|
14.2
|
1.0
|
|
CE1
|
A:HIS198
|
3.0
|
16.0
|
1.0
|
|
CE1
|
A:HIS210
|
3.0
|
14.6
|
1.0
|
|
C4C
|
A:HEC802
|
3.0
|
14.4
|
1.0
|
|
C4A
|
A:HEC802
|
3.0
|
14.3
|
1.0
|
|
C1C
|
A:HEC802
|
3.0
|
13.8
|
1.0
|
|
C1A
|
A:HEC802
|
3.0
|
14.4
|
1.0
|
|
C1D
|
A:HEC802
|
3.1
|
14.1
|
1.0
|
|
C1B
|
A:HEC802
|
3.1
|
13.7
|
1.0
|
|
C4D
|
A:HEC802
|
3.1
|
15.6
|
1.0
|
|
C4B
|
A:HEC802
|
3.1
|
14.2
|
1.0
|
|
CD2
|
A:HIS210
|
3.1
|
14.2
|
1.0
|
|
CD2
|
A:HIS198
|
3.1
|
14.7
|
1.0
|
|
CHD
|
A:HEC802
|
3.4
|
14.1
|
1.0
|
|
CHB
|
A:HEC802
|
3.4
|
13.5
|
1.0
|
|
CHC
|
A:HEC802
|
3.4
|
13.3
|
1.0
|
|
CHA
|
A:HEC802
|
3.4
|
15.6
|
1.0
|
|
ND1
|
A:HIS198
|
4.1
|
16.0
|
1.0
|
|
ND1
|
A:HIS210
|
4.1
|
14.2
|
1.0
|
|
CG
|
A:HIS210
|
4.2
|
14.1
|
1.0
|
|
CG
|
A:HIS198
|
4.2
|
16.0
|
1.0
|
|
C3C
|
A:HEC802
|
4.3
|
14.2
|
1.0
|
|
C3A
|
A:HEC802
|
4.3
|
14.6
|
1.0
|
|
C2C
|
A:HEC802
|
4.3
|
13.6
|
1.0
|
|
C2A
|
A:HEC802
|
4.3
|
15.4
|
1.0
|
|
C3B
|
A:HEC802
|
4.3
|
13.6
|
1.0
|
|
C3D
|
A:HEC802
|
4.3
|
15.1
|
1.0
|
|
C2D
|
A:HEC802
|
4.4
|
14.4
|
1.0
|
|
C2B
|
A:HEC802
|
4.4
|
13.9
|
1.0
|
|
CG
|
A:GLN199
|
4.8
|
19.8
|
1.0
|
|
Iron binding site 3 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 3 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe803
b:13.4
occ:1.00
|
FE
|
A:HEC803
|
0.0
|
13.4
|
1.0
|
|
NE2
|
A:HIS261
|
2.0
|
15.3
|
1.0
|
|
NB
|
A:HEC803
|
2.0
|
12.3
|
1.0
|
|
NE2
|
A:HIS230
|
2.0
|
14.0
|
1.0
|
|
ND
|
A:HEC803
|
2.0
|
12.4
|
1.0
|
|
NC
|
A:HEC803
|
2.0
|
12.4
|
1.0
|
|
NA
|
A:HEC803
|
2.1
|
13.0
|
1.0
|
|
CE1
|
A:HIS261
|
3.0
|
13.8
|
1.0
|
|
CD2
|
A:HIS230
|
3.0
|
13.5
|
1.0
|
|
C1C
|
A:HEC803
|
3.0
|
13.0
|
1.0
|
|
C1B
|
A:HEC803
|
3.0
|
13.0
|
1.0
|
|
CD2
|
A:HIS261
|
3.0
|
15.0
|
1.0
|
|
C4C
|
A:HEC803
|
3.0
|
12.3
|
1.0
|
|
C4B
|
A:HEC803
|
3.0
|
13.4
|
1.0
|
|
C1D
|
A:HEC803
|
3.0
|
13.3
|
1.0
|
|
CE1
|
A:HIS230
|
3.0
|
13.2
|
1.0
|
|
C4D
|
A:HEC803
|
3.0
|
13.3
|
1.0
|
|
C4A
|
A:HEC803
|
3.1
|
12.7
|
1.0
|
|
C1A
|
A:HEC803
|
3.1
|
12.5
|
1.0
|
|
CHC
|
A:HEC803
|
3.4
|
12.2
|
1.0
|
|
CHB
|
A:HEC803
|
3.4
|
12.6
|
1.0
|
|
CHA
|
A:HEC803
|
3.4
|
12.4
|
1.0
|
|
CHD
|
A:HEC803
|
3.4
|
12.1
|
1.0
|
|
ND1
|
A:HIS261
|
4.1
|
14.0
|
1.0
|
|
ND1
|
A:HIS230
|
4.2
|
13.3
|
1.0
|
|
CG
|
A:HIS230
|
4.2
|
13.5
|
1.0
|
|
CG
|
A:HIS261
|
4.2
|
13.9
|
1.0
|
|
C3C
|
A:HEC803
|
4.3
|
12.8
|
1.0
|
|
C2B
|
A:HEC803
|
4.3
|
12.7
|
1.0
|
|
C2C
|
A:HEC803
|
4.3
|
12.9
|
1.0
|
|
C3B
|
A:HEC803
|
4.3
|
13.3
|
1.0
|
|
C2D
|
A:HEC803
|
4.3
|
13.3
|
1.0
|
|
C3D
|
A:HEC803
|
4.4
|
13.4
|
1.0
|
|
C3A
|
A:HEC803
|
4.4
|
13.0
|
1.0
|
|
C2A
|
A:HEC803
|
4.4
|
12.6
|
1.0
|
|
CB
|
A:TRP273
|
4.8
|
15.8
|
1.0
|
|
CG2
|
A:ILE229
|
4.9
|
13.0
|
1.0
|
|
Iron binding site 4 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 4 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe804
b:15.9
occ:1.00
|
FE
|
A:HEC804
|
0.0
|
15.9
|
1.0
|
|
NE2
|
A:HIS286
|
2.0
|
16.0
|
1.0
|
|
NE2
|
A:HIS319
|
2.0
|
15.0
|
1.0
|
|
ND
|
A:HEC804
|
2.0
|
16.3
|
1.0
|
|
NB
|
A:HEC804
|
2.0
|
15.5
|
1.0
|
|
NA
|
A:HEC804
|
2.0
|
15.8
|
1.0
|
|
NC
|
A:HEC804
|
2.1
|
14.5
|
1.0
|
|
CE1
|
A:HIS286
|
2.9
|
17.2
|
1.0
|
|
CE1
|
A:HIS319
|
3.0
|
15.0
|
1.0
|
|
C4B
|
A:HEC804
|
3.0
|
14.2
|
1.0
|
|
C1D
|
A:HEC804
|
3.0
|
16.6
|
1.0
|
|
C4D
|
A:HEC804
|
3.0
|
17.4
|
1.0
|
|
C4A
|
A:HEC804
|
3.0
|
16.7
|
1.0
|
|
CD2
|
A:HIS319
|
3.0
|
15.3
|
1.0
|
|
C1B
|
A:HEC804
|
3.1
|
15.1
|
1.0
|
|
C1C
|
A:HEC804
|
3.1
|
13.8
|
1.0
|
|
CD2
|
A:HIS286
|
3.1
|
15.6
|
1.0
|
|
C1A
|
A:HEC804
|
3.1
|
16.5
|
1.0
|
|
C4C
|
A:HEC804
|
3.1
|
14.3
|
1.0
|
|
CHC
|
A:HEC804
|
3.4
|
13.8
|
1.0
|
|
CHA
|
A:HEC804
|
3.4
|
17.1
|
1.0
|
|
CHD
|
A:HEC804
|
3.4
|
15.8
|
1.0
|
|
CHB
|
A:HEC804
|
3.4
|
15.5
|
1.0
|
|
ND1
|
A:HIS286
|
4.1
|
15.6
|
1.0
|
|
ND1
|
A:HIS319
|
4.1
|
15.5
|
1.0
|
|
CG
|
A:HIS286
|
4.2
|
16.8
|
1.0
|
|
CG
|
A:HIS319
|
4.2
|
14.6
|
1.0
|
|
C3B
|
A:HEC804
|
4.3
|
14.1
|
1.0
|
|
C2D
|
A:HEC804
|
4.3
|
17.8
|
1.0
|
|
C2B
|
A:HEC804
|
4.3
|
14.7
|
1.0
|
|
C3D
|
A:HEC804
|
4.3
|
18.4
|
1.0
|
|
C3C
|
A:HEC804
|
4.4
|
15.0
|
1.0
|
|
C2C
|
A:HEC804
|
4.4
|
13.9
|
1.0
|
|
C3A
|
A:HEC804
|
4.4
|
17.5
|
1.0
|
|
C2A
|
A:HEC804
|
4.4
|
17.3
|
1.0
|
|
CD1
|
A:LEU318
|
4.7
|
19.7
|
1.0
|
|
CMA
|
A:HEC805
|
5.0
|
18.0
|
1.0
|
|
Iron binding site 5 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 5 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe805
b:18.5
occ:1.00
|
FE
|
A:HEC805
|
0.0
|
18.5
|
1.0
|
|
NE2
|
A:HIS310
|
2.0
|
18.7
|
1.0
|
|
ND
|
A:HEC805
|
2.0
|
18.9
|
1.0
|
|
NE2
|
A:HIS297
|
2.0
|
19.7
|
1.0
|
|
NB
|
A:HEC805
|
2.1
|
16.8
|
1.0
|
|
NC
|
A:HEC805
|
2.1
|
20.1
|
1.0
|
|
NA
|
A:HEC805
|
2.1
|
17.8
|
1.0
|
|
CE1
|
A:HIS310
|
3.0
|
17.5
|
1.0
|
|
CD2
|
A:HIS310
|
3.0
|
17.9
|
1.0
|
|
C1D
|
A:HEC805
|
3.0
|
20.4
|
1.0
|
|
CE1
|
A:HIS297
|
3.0
|
19.3
|
1.0
|
|
C4D
|
A:HEC805
|
3.0
|
19.5
|
1.0
|
|
C1B
|
A:HEC805
|
3.0
|
17.7
|
1.0
|
|
C4B
|
A:HEC805
|
3.1
|
16.7
|
1.0
|
|
CD2
|
A:HIS297
|
3.1
|
19.4
|
1.0
|
|
C4A
|
A:HEC805
|
3.1
|
17.8
|
1.0
|
|
C4C
|
A:HEC805
|
3.1
|
20.0
|
1.0
|
|
C1C
|
A:HEC805
|
3.1
|
19.2
|
1.0
|
|
C1A
|
A:HEC805
|
3.1
|
17.6
|
1.0
|
|
CHB
|
A:HEC805
|
3.4
|
17.9
|
1.0
|
|
CHA
|
A:HEC805
|
3.4
|
18.4
|
1.0
|
|
CHD
|
A:HEC805
|
3.4
|
20.4
|
1.0
|
|
CHC
|
A:HEC805
|
3.4
|
18.5
|
1.0
|
|
ND1
|
A:HIS310
|
4.1
|
15.8
|
1.0
|
|
CG
|
A:HIS310
|
4.1
|
17.9
|
1.0
|
|
ND1
|
A:HIS297
|
4.1
|
17.7
|
1.0
|
|
CG
|
A:HIS297
|
4.2
|
19.2
|
1.0
|
|
C2D
|
A:HEC805
|
4.3
|
22.6
|
1.0
|
|
C3B
|
A:HEC805
|
4.3
|
17.4
|
1.0
|
|
C3D
|
A:HEC805
|
4.3
|
22.1
|
1.0
|
|
C2B
|
A:HEC805
|
4.4
|
17.5
|
1.0
|
|
C3C
|
A:HEC805
|
4.4
|
20.3
|
1.0
|
|
C3A
|
A:HEC805
|
4.4
|
17.6
|
1.0
|
|
C2A
|
A:HEC805
|
4.4
|
17.8
|
1.0
|
|
C2C
|
A:HEC805
|
4.4
|
19.4
|
1.0
|
|
O
|
A:HOH1507
|
4.8
|
32.2
|
1.0
|
|
Iron binding site 6 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 6 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe806
b:16.5
occ:1.00
|
FE
|
A:HEC806
|
0.0
|
16.5
|
1.0
|
|
NE2
|
A:HIS564
|
2.0
|
17.0
|
1.0
|
|
NE2
|
A:HIS500
|
2.0
|
16.6
|
1.0
|
|
NC
|
A:HEC806
|
2.0
|
16.6
|
1.0
|
|
NA
|
A:HEC806
|
2.0
|
16.9
|
1.0
|
|
NB
|
A:HEC806
|
2.0
|
15.7
|
1.0
|
|
ND
|
A:HEC806
|
2.1
|
15.9
|
1.0
|
|
CE1
|
A:HIS500
|
3.0
|
16.0
|
1.0
|
|
CE1
|
A:HIS564
|
3.0
|
17.4
|
1.0
|
|
CD2
|
A:HIS564
|
3.0
|
17.8
|
1.0
|
|
C4C
|
A:HEC806
|
3.0
|
16.2
|
1.0
|
|
C4B
|
A:HEC806
|
3.0
|
15.6
|
1.0
|
|
C1B
|
A:HEC806
|
3.0
|
15.6
|
1.0
|
|
C4A
|
A:HEC806
|
3.0
|
18.0
|
1.0
|
|
C1A
|
A:HEC806
|
3.0
|
17.4
|
1.0
|
|
C1C
|
A:HEC806
|
3.1
|
15.9
|
1.0
|
|
C4D
|
A:HEC806
|
3.1
|
17.3
|
1.0
|
|
CD2
|
A:HIS500
|
3.1
|
16.6
|
1.0
|
|
C1D
|
A:HEC806
|
3.1
|
15.8
|
1.0
|
|
CHB
|
A:HEC806
|
3.4
|
15.8
|
1.0
|
|
CHD
|
A:HEC806
|
3.4
|
14.9
|
1.0
|
|
CHA
|
A:HEC806
|
3.4
|
16.9
|
1.0
|
|
CHC
|
A:HEC806
|
3.4
|
15.2
|
1.0
|
|
ND1
|
A:HIS500
|
4.1
|
15.3
|
1.0
|
|
ND1
|
A:HIS564
|
4.1
|
15.4
|
1.0
|
|
CG
|
A:HIS564
|
4.1
|
17.0
|
1.0
|
|
CG
|
A:HIS500
|
4.2
|
15.4
|
1.0
|
|
C3C
|
A:HEC806
|
4.3
|
16.5
|
1.0
|
|
C3B
|
A:HEC806
|
4.3
|
15.1
|
1.0
|
|
C2A
|
A:HEC806
|
4.3
|
19.3
|
1.0
|
|
C2B
|
A:HEC806
|
4.3
|
16.3
|
1.0
|
|
C2C
|
A:HEC806
|
4.3
|
16.6
|
1.0
|
|
C2D
|
A:HEC806
|
4.4
|
16.6
|
1.0
|
|
C3A
|
A:HEC806
|
4.4
|
17.7
|
1.0
|
|
C3D
|
A:HEC806
|
4.4
|
17.0
|
1.0
|
|
Iron binding site 7 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 7 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe807
b:18.5
occ:1.00
|
FE
|
A:HEC807
|
0.0
|
18.5
|
1.0
|
|
NE2
|
A:HIS507
|
2.0
|
22.1
|
1.0
|
|
NB
|
A:HEC807
|
2.0
|
18.5
|
1.0
|
|
ND
|
A:HEC807
|
2.0
|
18.7
|
1.0
|
|
NE2
|
A:HIS542
|
2.0
|
16.8
|
1.0
|
|
NC
|
A:HEC807
|
2.1
|
19.3
|
1.0
|
|
NA
|
A:HEC807
|
2.1
|
18.6
|
1.0
|
|
CE1
|
A:HIS507
|
3.0
|
25.7
|
1.0
|
|
C1D
|
A:HEC807
|
3.0
|
17.9
|
1.0
|
|
CE1
|
A:HIS542
|
3.0
|
17.3
|
1.0
|
|
C4D
|
A:HEC807
|
3.0
|
19.4
|
1.0
|
|
C1B
|
A:HEC807
|
3.0
|
18.5
|
1.0
|
|
C4B
|
A:HEC807
|
3.0
|
18.9
|
1.0
|
|
CD2
|
A:HIS507
|
3.1
|
21.1
|
1.0
|
|
C4C
|
A:HEC807
|
3.1
|
19.7
|
1.0
|
|
C1C
|
A:HEC807
|
3.1
|
18.2
|
1.0
|
|
CD2
|
A:HIS542
|
3.1
|
16.5
|
1.0
|
|
C1A
|
A:HEC807
|
3.1
|
20.2
|
1.0
|
|
C4A
|
A:HEC807
|
3.1
|
18.2
|
1.0
|
|
CHD
|
A:HEC807
|
3.4
|
19.0
|
1.0
|
|
CHA
|
A:HEC807
|
3.4
|
20.4
|
1.0
|
|
CHB
|
A:HEC807
|
3.4
|
17.4
|
1.0
|
|
CHC
|
A:HEC807
|
3.4
|
18.8
|
1.0
|
|
ND1
|
A:HIS507
|
4.1
|
25.3
|
1.0
|
|
ND1
|
A:HIS542
|
4.2
|
16.6
|
1.0
|
|
CG
|
A:HIS507
|
4.2
|
22.6
|
1.0
|
|
CG
|
A:HIS542
|
4.2
|
17.0
|
1.0
|
|
C3B
|
A:HEC807
|
4.3
|
18.0
|
1.0
|
|
C2B
|
A:HEC807
|
4.3
|
18.3
|
1.0
|
|
C2D
|
A:HEC807
|
4.3
|
19.2
|
1.0
|
|
C3D
|
A:HEC807
|
4.4
|
19.9
|
1.0
|
|
C3C
|
A:HEC807
|
4.4
|
19.3
|
1.0
|
|
C2C
|
A:HEC807
|
4.4
|
18.7
|
1.0
|
|
C2A
|
A:HEC807
|
4.4
|
20.2
|
1.0
|
|
C3A
|
A:HEC807
|
4.4
|
17.9
|
1.0
|
|
Iron binding site 8 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 8 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe808
b:14.7
occ:1.00
|
FE
|
A:HEC808
|
0.0
|
14.7
|
1.0
|
|
ND
|
A:HEC808
|
2.0
|
14.0
|
1.0
|
|
NE2
|
A:HIS580
|
2.0
|
16.6
|
1.0
|
|
NB
|
A:HEC808
|
2.0
|
14.8
|
1.0
|
|
NA
|
A:HEC808
|
2.0
|
14.5
|
1.0
|
|
NC
|
A:HEC808
|
2.1
|
16.2
|
1.0
|
|
SD
|
A:MET561
|
2.3
|
15.7
|
1.0
|
|
C4D
|
A:HEC808
|
3.0
|
15.8
|
1.0
|
|
CE1
|
A:HIS580
|
3.0
|
16.4
|
1.0
|
|
C1C
|
A:HEC808
|
3.0
|
15.8
|
1.0
|
|
CD2
|
A:HIS580
|
3.0
|
15.8
|
1.0
|
|
C1D
|
A:HEC808
|
3.0
|
14.8
|
1.0
|
|
C4B
|
A:HEC808
|
3.0
|
16.1
|
1.0
|
|
C1A
|
A:HEC808
|
3.0
|
15.4
|
1.0
|
|
C4A
|
A:HEC808
|
3.0
|
14.6
|
1.0
|
|
C4C
|
A:HEC808
|
3.1
|
15.3
|
1.0
|
|
C1B
|
A:HEC808
|
3.1
|
15.0
|
1.0
|
|
CE
|
A:MET561
|
3.4
|
18.7
|
1.0
|
|
CHA
|
A:HEC808
|
3.4
|
14.4
|
1.0
|
|
CG
|
A:MET561
|
3.4
|
15.4
|
1.0
|
|
CHC
|
A:HEC808
|
3.4
|
14.5
|
1.0
|
|
CHB
|
A:HEC808
|
3.4
|
14.6
|
1.0
|
|
CHD
|
A:HEC808
|
3.4
|
14.7
|
1.0
|
|
ND1
|
A:HIS580
|
4.1
|
16.8
|
1.0
|
|
CG
|
A:HIS580
|
4.2
|
14.8
|
1.0
|
|
C3D
|
A:HEC808
|
4.3
|
15.4
|
1.0
|
|
C3C
|
A:HEC808
|
4.3
|
15.3
|
1.0
|
|
C2D
|
A:HEC808
|
4.3
|
14.5
|
1.0
|
|
C2C
|
A:HEC808
|
4.3
|
15.7
|
1.0
|
|
C3A
|
A:HEC808
|
4.3
|
13.8
|
1.0
|
|
C3B
|
A:HEC808
|
4.4
|
16.1
|
1.0
|
|
C2A
|
A:HEC808
|
4.4
|
15.1
|
1.0
|
|
C2B
|
A:HEC808
|
4.4
|
15.4
|
1.0
|
|
CB
|
A:MET561
|
4.8
|
14.6
|
1.0
|
|
O
|
A:HOH1142
|
5.0
|
15.4
|
1.0
|
|
Iron binding site 9 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 9 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe809
b:15.6
occ:1.00
|
FE
|
A:HEC809
|
0.0
|
15.6
|
1.0
|
|
NE2
|
A:HIS618
|
2.0
|
14.5
|
1.0
|
|
NC
|
A:HEC809
|
2.0
|
15.4
|
1.0
|
|
NA
|
A:HEC809
|
2.0
|
14.8
|
1.0
|
|
NE2
|
A:HIS666
|
2.0
|
14.4
|
1.0
|
|
NB
|
A:HEC809
|
2.0
|
16.1
|
1.0
|
|
ND
|
A:HEC809
|
2.1
|
16.2
|
1.0
|
|
CE1
|
A:HIS618
|
2.9
|
14.3
|
1.0
|
|
C4A
|
A:HEC809
|
3.0
|
15.4
|
1.0
|
|
CD2
|
A:HIS618
|
3.0
|
15.5
|
1.0
|
|
C1B
|
A:HEC809
|
3.0
|
16.0
|
1.0
|
|
C4C
|
A:HEC809
|
3.0
|
16.7
|
1.0
|
|
CD2
|
A:HIS666
|
3.0
|
14.5
|
1.0
|
|
C1D
|
A:HEC809
|
3.0
|
16.9
|
1.0
|
|
C1C
|
A:HEC809
|
3.0
|
16.1
|
1.0
|
|
C4B
|
A:HEC809
|
3.0
|
16.1
|
1.0
|
|
C1A
|
A:HEC809
|
3.1
|
16.2
|
1.0
|
|
C4D
|
A:HEC809
|
3.1
|
17.1
|
1.0
|
|
CE1
|
A:HIS666
|
3.1
|
14.6
|
1.0
|
|
CHB
|
A:HEC809
|
3.4
|
15.0
|
1.0
|
|
CHD
|
A:HEC809
|
3.4
|
15.3
|
1.0
|
|
CHA
|
A:HEC809
|
3.4
|
16.9
|
1.0
|
|
CHC
|
A:HEC809
|
3.4
|
14.7
|
1.0
|
|
ND1
|
A:HIS618
|
4.1
|
15.2
|
1.0
|
|
CG
|
A:HIS618
|
4.1
|
15.1
|
1.0
|
|
ND1
|
A:HIS666
|
4.2
|
14.8
|
1.0
|
|
CG
|
A:HIS666
|
4.2
|
14.8
|
1.0
|
|
C2C
|
A:HEC809
|
4.3
|
17.4
|
1.0
|
|
C3A
|
A:HEC809
|
4.3
|
14.7
|
1.0
|
|
C3C
|
A:HEC809
|
4.3
|
18.3
|
1.0
|
|
C2D
|
A:HEC809
|
4.3
|
18.6
|
1.0
|
|
C3B
|
A:HEC809
|
4.3
|
15.9
|
1.0
|
|
C2B
|
A:HEC809
|
4.4
|
16.4
|
1.0
|
|
C3D
|
A:HEC809
|
4.4
|
19.6
|
1.0
|
|
C2A
|
A:HEC809
|
4.4
|
16.0
|
1.0
|
|
CBB
|
A:HEC808
|
4.9
|
15.9
|
1.0
|
|
CMA
|
A:HEC810
|
5.0
|
15.9
|
1.0
|
|
Iron binding site 10 out
of 10 in 7o7g
Go back to
Iron Binding Sites List in 7o7g
Iron binding site 10 out
of 10 in the Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Crystal Structure of the Shewanella Oneidensis MR1 Mtrc Mutant H561M within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe810
b:17.0
occ:1.00
|
FE
|
A:HEC810
|
0.0
|
17.0
|
1.0
|
|
ND
|
A:HEC810
|
2.0
|
18.2
|
1.0
|
|
NE2
|
A:HIS659
|
2.0
|
15.5
|
1.0
|
|
NE2
|
A:HIS627
|
2.0
|
15.5
|
1.0
|
|
NB
|
A:HEC810
|
2.0
|
16.4
|
1.0
|
|
NC
|
A:HEC810
|
2.0
|
16.8
|
1.0
|
|
NA
|
A:HEC810
|
2.1
|
16.7
|
1.0
|
|
CE1
|
A:HIS659
|
3.0
|
15.4
|
1.0
|
|
CD2
|
A:HIS627
|
3.0
|
15.3
|
1.0
|
|
C1D
|
A:HEC810
|
3.0
|
19.4
|
1.0
|
|
C1C
|
A:HEC810
|
3.0
|
16.5
|
1.0
|
|
C4C
|
A:HEC810
|
3.0
|
17.4
|
1.0
|
|
C4D
|
A:HEC810
|
3.0
|
17.7
|
1.0
|
|
C4B
|
A:HEC810
|
3.0
|
15.7
|
1.0
|
|
C1A
|
A:HEC810
|
3.1
|
16.5
|
1.0
|
|
CE1
|
A:HIS627
|
3.1
|
16.6
|
1.0
|
|
C1B
|
A:HEC810
|
3.1
|
14.9
|
1.0
|
|
C4A
|
A:HEC810
|
3.1
|
15.6
|
1.0
|
|
CD2
|
A:HIS659
|
3.1
|
15.0
|
1.0
|
|
CHC
|
A:HEC810
|
3.4
|
15.7
|
1.0
|
|
CHA
|
A:HEC810
|
3.4
|
17.1
|
1.0
|
|
CHD
|
A:HEC810
|
3.4
|
17.3
|
1.0
|
|
CHB
|
A:HEC810
|
3.4
|
15.7
|
1.0
|
|
ND1
|
A:HIS659
|
4.1
|
15.0
|
1.0
|
|
CG
|
A:HIS627
|
4.1
|
15.9
|
1.0
|
|
ND1
|
A:HIS627
|
4.2
|
16.8
|
1.0
|
|
CG
|
A:HIS659
|
4.2
|
15.3
|
1.0
|
|
C2C
|
A:HEC810
|
4.3
|
16.1
|
1.0
|
|
C3D
|
A:HEC810
|
4.3
|
20.3
|
1.0
|
|
C3C
|
A:HEC810
|
4.3
|
16.9
|
1.0
|
|
C2D
|
A:HEC810
|
4.3
|
19.6
|
1.0
|
|
C2A
|
A:HEC810
|
4.3
|
16.0
|
1.0
|
|
C2B
|
A:HEC810
|
4.4
|
16.4
|
1.0
|
|
C3B
|
A:HEC810
|
4.4
|
15.7
|
1.0
|
|
C3A
|
A:HEC810
|
4.4
|
15.9
|
1.0
|
|
Reference:
J.H.Van Wonderen,
K.Adamczyk,
X.Wu,
X.Jiang,
S.E.H.Piper,
C.R.Hall,
M.J.Edwards,
T.A.Clarke,
H.Zhang,
L.J.C.Jeuken,
I.V.Sazanovich,
M.Towrie,
J.Blumberger,
S.R.Meech,
J.N.Butt.
Nanosecond Heme-to-Heme Electron Transfer Rates in A Multiheme Cytochrome Nanowire Reported By A Spectrally Unique His/Met-Ligated Heme. Proc.Natl.Acad.Sci.Usa V. 118 2021.
ISSN: ESSN 1091-6490
PubMed: 34556577
DOI: 10.1073/PNAS.2107939118
Page generated: Thu Aug 8 14:14:42 2024
|
