Atomistry » Iron » PDB 7p7l-7pr2 » 7pch
Atomistry »
  Iron »
    PDB 7p7l-7pr2 »
      7pch »

Iron in PDB 7pch: Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex

Iron Binding Sites:

The binding sites of Iron atom in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex (pdb code 7pch). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex, PDB code: 7pch:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 7pch

Go back to Iron Binding Sites List in 7pch
Iron binding site 1 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:97.8
occ:1.00
FE A:HEM201 0.0 97.8 1.0
ND A:HEM201 2.0 97.8 1.0
NA A:HEM201 2.0 97.8 1.0
NC A:HEM201 2.1 97.8 1.0
NB A:HEM201 2.1 97.8 1.0
NE2 A:HIS87 2.3 101.8 1.0
C4D A:HEM201 3.0 97.8 1.0
C1D A:HEM201 3.0 97.8 1.0
C4C A:HEM201 3.0 97.8 1.0
C1A A:HEM201 3.0 97.8 1.0
C1C A:HEM201 3.1 97.8 1.0
C4A A:HEM201 3.1 97.8 1.0
C4B A:HEM201 3.1 97.8 1.0
C1B A:HEM201 3.1 97.8 1.0
CE1 A:HIS87 3.2 101.8 1.0
CHA A:HEM201 3.4 97.8 1.0
CHD A:HEM201 3.4 97.8 1.0
CD2 A:HIS87 3.4 101.8 1.0
CHC A:HEM201 3.4 97.8 1.0
CHB A:HEM201 3.5 97.8 1.0
NE2 A:HIS58 3.8 106.3 1.0
CE1 A:HIS58 4.1 106.3 1.0
C3D A:HEM201 4.2 97.8 1.0
C2D A:HEM201 4.2 97.8 1.0
C2A A:HEM201 4.3 97.8 1.0
C3C A:HEM201 4.3 97.8 1.0
C2C A:HEM201 4.3 97.8 1.0
C3A A:HEM201 4.3 97.8 1.0
C3B A:HEM201 4.3 97.8 1.0
C2B A:HEM201 4.3 97.8 1.0
ND1 A:HIS87 4.4 101.8 1.0
CG A:HIS87 4.5 101.8 1.0
CG2 A:VAL62 4.6 102.4 1.0

Iron binding site 2 out of 4 in 7pch

Go back to Iron Binding Sites List in 7pch
Iron binding site 2 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:97.8
occ:1.00
FE B:HEM201 0.0 97.8 1.0
ND B:HEM201 2.0 97.8 1.0
NA B:HEM201 2.0 97.8 1.0
NC B:HEM201 2.1 97.8 1.0
NB B:HEM201 2.1 97.8 1.0
NE2 B:HIS92 2.4 98.7 1.0
C4D B:HEM201 3.0 97.8 1.0
C1D B:HEM201 3.0 97.8 1.0
C4C B:HEM201 3.0 97.8 1.0
C1A B:HEM201 3.0 97.8 1.0
C1C B:HEM201 3.1 97.8 1.0
C4B B:HEM201 3.1 97.8 1.0
C4A B:HEM201 3.1 97.8 1.0
C1B B:HEM201 3.1 97.8 1.0
CE1 B:HIS92 3.3 98.7 1.0
CHA B:HEM201 3.3 97.8 1.0
CHD B:HEM201 3.4 97.8 1.0
CHC B:HEM201 3.4 97.8 1.0
CHB B:HEM201 3.5 97.8 1.0
CD2 B:HIS92 3.5 98.7 1.0
C3D B:HEM201 4.2 97.8 1.0
C2D B:HEM201 4.2 97.8 1.0
C2A B:HEM201 4.3 97.8 1.0
C3C B:HEM201 4.3 97.8 1.0
C2C B:HEM201 4.3 97.8 1.0
C3B B:HEM201 4.3 97.8 1.0
C3A B:HEM201 4.3 97.8 1.0
C2B B:HEM201 4.3 97.8 1.0
ND1 B:HIS92 4.5 98.7 1.0
NE2 B:HIS63 4.5 106.0 1.0
CG B:HIS92 4.6 98.7 1.0
CG2 B:VAL67 4.6 98.5 1.0

Iron binding site 3 out of 4 in 7pch

Go back to Iron Binding Sites List in 7pch
Iron binding site 3 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe201

b:97.8
occ:1.00
FE C:HEM201 0.0 97.8 1.0
ND C:HEM201 2.0 97.8 1.0
NA C:HEM201 2.0 97.8 1.0
NC C:HEM201 2.1 97.8 1.0
NB C:HEM201 2.1 97.8 1.0
NE2 C:HIS87 2.3 101.8 1.0
C4D C:HEM201 3.0 97.8 1.0
C1D C:HEM201 3.0 97.8 1.0
C4C C:HEM201 3.0 97.8 1.0
C1A C:HEM201 3.0 97.8 1.0
C1C C:HEM201 3.1 97.8 1.0
C4A C:HEM201 3.1 97.8 1.0
C4B C:HEM201 3.1 97.8 1.0
C1B C:HEM201 3.1 97.8 1.0
CE1 C:HIS87 3.2 101.8 1.0
CHA C:HEM201 3.4 97.8 1.0
CHD C:HEM201 3.4 97.8 1.0
CD2 C:HIS87 3.4 101.8 1.0
CHC C:HEM201 3.4 97.8 1.0
CHB C:HEM201 3.5 97.8 1.0
NE2 C:HIS58 3.8 106.3 1.0
CE1 C:HIS58 4.1 106.3 1.0
C3D C:HEM201 4.2 97.8 1.0
C2D C:HEM201 4.2 97.8 1.0
C2A C:HEM201 4.3 97.8 1.0
C3C C:HEM201 4.3 97.8 1.0
C2C C:HEM201 4.3 97.8 1.0
C3A C:HEM201 4.3 97.8 1.0
C3B C:HEM201 4.3 97.8 1.0
C2B C:HEM201 4.3 97.8 1.0
ND1 C:HIS87 4.4 101.8 1.0
CG C:HIS87 4.5 101.8 1.0
CG2 C:VAL62 4.6 102.4 1.0

Iron binding site 4 out of 4 in 7pch

Go back to Iron Binding Sites List in 7pch
Iron binding site 4 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:97.8
occ:1.00
FE D:HEM201 0.0 97.8 1.0
ND D:HEM201 2.0 97.8 1.0
NA D:HEM201 2.0 97.8 1.0
NC D:HEM201 2.1 97.8 1.0
NB D:HEM201 2.1 97.8 1.0
NE2 D:HIS92 2.4 98.7 1.0
C4D D:HEM201 3.0 97.8 1.0
C1D D:HEM201 3.0 97.8 1.0
C4C D:HEM201 3.0 97.8 1.0
C1A D:HEM201 3.0 97.8 1.0
C1C D:HEM201 3.1 97.8 1.0
C4B D:HEM201 3.1 97.8 1.0
C4A D:HEM201 3.1 97.8 1.0
C1B D:HEM201 3.1 97.8 1.0
CE1 D:HIS92 3.3 98.7 1.0
CHA D:HEM201 3.3 97.8 1.0
CHD D:HEM201 3.4 97.8 1.0
CHC D:HEM201 3.4 97.8 1.0
CHB D:HEM201 3.5 97.8 1.0
CD2 D:HIS92 3.5 98.7 1.0
C3D D:HEM201 4.2 97.8 1.0
C2D D:HEM201 4.2 97.8 1.0
C2A D:HEM201 4.3 97.8 1.0
C3C D:HEM201 4.3 97.8 1.0
C2C D:HEM201 4.3 97.8 1.0
C3B D:HEM201 4.3 97.8 1.0
C3A D:HEM201 4.3 97.8 1.0
C2B D:HEM201 4.3 97.8 1.0
ND1 D:HIS92 4.5 98.7 1.0
NE2 D:HIS63 4.5 106.0 1.0
CG D:HIS92 4.6 98.7 1.0
CG2 D:VAL67 4.6 98.5 1.0

Reference:

O.De Bei, M.Marchetti, L.Ronda, E.Gianquinto, L.Lazzarato, D.Y.Chirgadze, S.W.Hardwick, L.R.Cooper, F.Spyrakis, B.F.Luisi, B.Campanini, S.Bettati. Cryo-Em Structures of Staphylococcal Isdb Bound to Human Hemoglobin Reveal the Process of Heme Extraction. Proc.Natl.Acad.Sci.Usa V. 119 08119 2022.
ISSN: ESSN 1091-6490
PubMed: 35357971
DOI: 10.1073/PNAS.2116708119
Page generated: Thu Aug 7 02:41:01 2025

Last articles

Mg in 5MMJ
Mg in 5MRA
Mg in 5MTV
Mg in 5MS0
Mg in 5MRU
Mg in 5MQJ
Mg in 5MQW
Mg in 5MQT
Mg in 5MQL
Mg in 5MQ1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy