Iron in PDB 7pcq: Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex

The binding sites of Iron atom in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex (pdb code 7pcq). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex, PDB code: 7pcq:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:97.8 occ:1.00 FE A:HEM201 0.0 97.8 1.0 ND A:HEM201 2.0 97.8 1.0 NA A:HEM201 2.0 97.8 1.0 NC A:HEM201 2.1 97.8 1.0 NB A:HEM201 2.1 97.8 1.0 NE2 A:HIS87 2.4 101.8 1.0 C4D A:HEM201 3.0 97.8 1.0 C1D A:HEM201 3.0 97.8 1.0 C4C A:HEM201 3.0 97.8 1.0 C1A A:HEM201 3.0 97.8 1.0 C1C A:HEM201 3.1 97.8 1.0 C4B A:HEM201 3.1 97.8 1.0 C4A A:HEM201 3.1 97.8 1.0 C1B A:HEM201 3.1 97.8 1.0 CE1 A:HIS87 3.2 101.8 1.0 CHA A:HEM201 3.3 97.8 1.0 CHD A:HEM201 3.4 97.8 1.0 CHC A:HEM201 3.4 97.8 1.0 CD2 A:HIS87 3.4 101.8 1.0 CHB A:HEM201 3.5 97.8 1.0 NE2 A:HIS58 4.1 106.3 1.0 CE1 A:HIS58 4.1 106.3 1.0 C3D A:HEM201 4.2 97.8 1.0 C2D A:HEM201 4.2 97.8 1.0 C2A A:HEM201 4.3 97.8 1.0 C3C A:HEM201 4.3 97.8 1.0 C2C A:HEM201 4.3 97.8 1.0 C3A A:HEM201 4.3 97.8 1.0 C3B A:HEM201 4.3 97.8 1.0 C2B A:HEM201 4.3 97.8 1.0 ND1 A:HIS87 4.4 101.8 1.0 CG A:HIS87 4.5 101.8 1.0 CG2 A:VAL62 4.6 102.4 1.0

Iron binding site 2 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:97.8 occ:1.00 FE B:HEM201 0.0 97.8 1.0 ND B:HEM201 2.0 97.8 1.0 NA B:HEM201 2.0 97.8 1.0 NC B:HEM201 2.1 97.8 1.0 NB B:HEM201 2.1 97.8 1.0 NE2 B:HIS92 2.3 98.7 1.0 C1D B:HEM201 3.0 97.8 1.0 C4D B:HEM201 3.0 97.8 1.0 C4C B:HEM201 3.0 97.8 1.0 C1A B:HEM201 3.0 97.8 1.0 C1C B:HEM201 3.1 97.8 1.0 C4A B:HEM201 3.1 97.8 1.0 C4B B:HEM201 3.1 97.8 1.0 CE1 B:HIS92 3.1 98.7 1.0 C1B B:HEM201 3.1 97.8 1.0 CHD B:HEM201 3.4 97.8 1.0 CHA B:HEM201 3.4 97.8 1.0 CHC B:HEM201 3.4 97.8 1.0 CD2 B:HIS92 3.4 98.7 1.0 CHB B:HEM201 3.5 97.8 1.0 C3D B:HEM201 4.2 97.8 1.0 C2D B:HEM201 4.2 97.8 1.0 NE2 B:HIS63 4.3 106.0 1.0 ND1 B:HIS92 4.3 98.7 1.0 C2A B:HEM201 4.3 97.8 1.0 C3C B:HEM201 4.3 97.8 1.0 C2C B:HEM201 4.3 97.8 1.0 C3A B:HEM201 4.3 97.8 1.0 C3B B:HEM201 4.3 97.8 1.0 C2B B:HEM201 4.3 97.8 1.0 CG2 B:VAL67 4.5 98.5 1.0 CG B:HIS92 4.5 98.7 1.0 CE1 B:HIS63 4.9 106.0 1.0

Iron binding site 3 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe201 b:97.8 occ:1.00 FE C:HEM201 0.0 97.8 1.0 ND C:HEM201 2.0 97.8 1.0 NA C:HEM201 2.0 97.8 1.0 NC C:HEM201 2.1 97.8 1.0 NB C:HEM201 2.1 97.8 1.0 NE2 C:HIS87 2.4 101.8 1.0 C4D C:HEM201 3.0 97.8 1.0 C1D C:HEM201 3.0 97.8 1.0 C4C C:HEM201 3.0 97.8 1.0 C1A C:HEM201 3.0 97.8 1.0 C1C C:HEM201 3.1 97.8 1.0 C4A C:HEM201 3.1 97.8 1.0 C4B C:HEM201 3.1 97.8 1.0 C1B C:HEM201 3.1 97.8 1.0 CE1 C:HIS87 3.2 101.8 1.0 CHA C:HEM201 3.3 97.8 1.0 CHD C:HEM201 3.4 97.8 1.0 CHC C:HEM201 3.4 97.8 1.0 CHB C:HEM201 3.5 97.8 1.0 CD2 C:HIS87 3.5 101.8 1.0 CE1 C:HIS58 3.8 106.3 1.0 NE2 C:HIS58 3.9 106.3 1.0 C3D C:HEM201 4.2 97.8 1.0 C2D C:HEM201 4.2 97.8 1.0 C2A C:HEM201 4.3 97.8 1.0 C3C C:HEM201 4.3 97.8 1.0 C2C C:HEM201 4.3 97.8 1.0 C3A C:HEM201 4.3 97.8 1.0 C3B C:HEM201 4.3 97.8 1.0 C2B C:HEM201 4.3 97.8 1.0 ND1 C:HIS87 4.4 101.8 1.0 CG C:HIS87 4.6 101.8 1.0 CG2 C:VAL62 4.8 102.4 1.0

Iron binding site 4 out of 4 in the Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Human Carboxyhemoglobin Bound to Staphylococcus Aureus Hemophore Isdb - 1:1 Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe201 b:97.8 occ:1.00 FE D:HEM201 0.0 97.8 1.0 ND D:HEM201 2.0 97.8 1.0 NA D:HEM201 2.0 97.8 1.0 NC D:HEM201 2.1 97.8 1.0 NB D:HEM201 2.1 97.8 1.0 NE2 D:HIS92 2.4 98.7 1.0 C1D D:HEM201 3.0 97.8 1.0 C4D D:HEM201 3.0 97.8 1.0 C4C D:HEM201 3.0 97.8 1.0 C1A D:HEM201 3.0 97.8 1.0 C1C D:HEM201 3.1 97.8 1.0 C4A D:HEM201 3.1 97.8 1.0 C4B D:HEM201 3.1 97.8 1.0 C1B D:HEM201 3.1 97.8 1.0 CE1 D:HIS92 3.3 98.7 1.0 CHD D:HEM201 3.3 97.8 1.0 CHA D:HEM201 3.4 97.8 1.0 CHC D:HEM201 3.4 97.8 1.0 CD2 D:HIS92 3.4 98.7 1.0 CHB D:HEM201 3.4 97.8 1.0 C2D D:HEM201 4.2 97.8 1.0 C3D D:HEM201 4.2 97.8 1.0 C2A D:HEM201 4.3 97.8 1.0 C3C D:HEM201 4.3 97.8 1.0 C2C D:HEM201 4.3 97.8 1.0 C3A D:HEM201 4.3 97.8 1.0 C3B D:HEM201 4.3 97.8 1.0 C2B D:HEM201 4.3 97.8 1.0 ND1 D:HIS92 4.5 98.7 1.0 CG2 D:VAL67 4.5 98.5 1.0 NE2 D:HIS63 4.5 106.0 1.0 CG D:HIS92 4.5 98.7 1.0

O.De Bei, M.Marchetti, L.Ronda, E.Gianquinto, L.Lazzarato, D.Y.Chirgadze, S.W.Hardwick, L.R.Cooper, F.Spyrakis, B.F.Luisi, B.Campanini, S.Bettati. Cryo-Em Structures of Staphylococcal Isdb Bound to Human Hemoglobin Reveal the Process of Heme Extraction. Proc.Natl.Acad.Sci.Usa V. 119 08119 2022.
ISSN: ESSN 1091-6490
PubMed: 35357971
DOI: 10.1073/PNAS.2116708119