Iron in PDB 7q5y: Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Protein crystallography data
The structure of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus, PDB code: 7q5y
was solved by
E.Warkentin,
U.Ermler,
G.Peng,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.95 /
2.70
|
Space group
|
P 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
132.88,
240.24,
230.92,
90,
95.57,
90
|
R / Rfree (%)
|
16.9 /
20.9
|
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
144;
Binding sites:
The binding sites of Iron atom in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
(pdb code 7q5y). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 144 binding sites of Iron where determined in the
Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus, PDB code: 7q5y:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 1 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:49.4
occ:1.00
|
FE1
|
A:SF4701
|
0.0
|
49.4
|
1.0
|
S4
|
A:SF4701
|
2.2
|
53.1
|
1.0
|
S2
|
A:SF4701
|
2.3
|
45.1
|
1.0
|
S3
|
A:SF4701
|
2.3
|
51.7
|
1.0
|
SG
|
A:CYS106
|
2.3
|
52.4
|
1.0
|
FE3
|
A:SF4701
|
2.7
|
52.8
|
1.0
|
FE2
|
A:SF4701
|
2.7
|
53.2
|
1.0
|
FE4
|
A:SF4701
|
2.7
|
50.0
|
1.0
|
CB
|
A:CYS106
|
3.2
|
53.2
|
1.0
|
S1
|
A:SF4701
|
3.8
|
47.8
|
1.0
|
CD
|
A:ARG153
|
4.0
|
57.3
|
1.0
|
NE
|
A:ARG153
|
4.4
|
58.5
|
1.0
|
NE2
|
A:HIS99
|
4.5
|
55.4
|
1.0
|
CB
|
A:LYS108
|
4.5
|
42.6
|
1.0
|
N
|
A:GLY209
|
4.6
|
48.9
|
1.0
|
CA
|
A:CYS106
|
4.7
|
51.1
|
1.0
|
SG
|
A:CYS112
|
4.7
|
58.0
|
1.0
|
SG
|
A:CYS103
|
4.7
|
55.1
|
1.0
|
CA
|
A:GLY209
|
4.8
|
46.8
|
1.0
|
CA
|
A:CYS103
|
4.8
|
49.8
|
1.0
|
N
|
A:CYS103
|
4.8
|
49.6
|
1.0
|
N
|
A:ALA109
|
5.0
|
38.4
|
1.0
|
C
|
A:ASP102
|
5.0
|
62.3
|
1.0
|
|
Iron binding site 2 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 2 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:53.2
occ:1.00
|
FE2
|
A:SF4701
|
0.0
|
53.2
|
1.0
|
SG
|
A:CYS103
|
2.2
|
55.1
|
1.0
|
S1
|
A:SF4701
|
2.3
|
47.8
|
1.0
|
S3
|
A:SF4701
|
2.3
|
51.7
|
1.0
|
S4
|
A:SF4701
|
2.3
|
53.1
|
1.0
|
FE4
|
A:SF4701
|
2.7
|
50.0
|
1.0
|
FE3
|
A:SF4701
|
2.7
|
52.8
|
1.0
|
FE1
|
A:SF4701
|
2.7
|
49.4
|
1.0
|
CB
|
A:CYS103
|
3.5
|
52.5
|
1.0
|
CA
|
A:CYS103
|
3.7
|
49.8
|
1.0
|
NE2
|
A:GLN115
|
3.8
|
59.6
|
1.0
|
S2
|
A:SF4701
|
3.8
|
45.1
|
1.0
|
N
|
A:CYS103
|
3.9
|
49.6
|
1.0
|
CB
|
A:GLN115
|
4.6
|
58.1
|
1.0
|
CD
|
A:GLN115
|
4.6
|
55.6
|
1.0
|
SG
|
A:CYS106
|
4.7
|
52.4
|
1.0
|
CD1
|
B:LEU498
|
4.7
|
57.7
|
1.0
|
C
|
A:ASP102
|
4.8
|
62.3
|
1.0
|
CG
|
A:GLN115
|
4.8
|
47.8
|
1.0
|
CB
|
A:CYS106
|
4.8
|
53.2
|
1.0
|
SG
|
A:CYS112
|
4.8
|
58.0
|
1.0
|
NE2
|
A:HIS99
|
4.8
|
55.4
|
1.0
|
|
Iron binding site 3 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 3 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:52.8
occ:1.00
|
FE3
|
A:SF4701
|
0.0
|
52.8
|
1.0
|
NE2
|
A:HIS99
|
2.2
|
55.4
|
1.0
|
S4
|
A:SF4701
|
2.2
|
53.1
|
1.0
|
S1
|
A:SF4701
|
2.3
|
47.8
|
1.0
|
S2
|
A:SF4701
|
2.3
|
45.1
|
1.0
|
FE2
|
A:SF4701
|
2.7
|
53.2
|
1.0
|
FE1
|
A:SF4701
|
2.7
|
49.4
|
1.0
|
FE4
|
A:SF4701
|
2.7
|
50.0
|
1.0
|
CD2
|
A:HIS99
|
2.7
|
55.9
|
1.0
|
CE1
|
A:HIS99
|
3.3
|
54.9
|
1.0
|
S3
|
A:SF4701
|
3.9
|
51.7
|
1.0
|
CG
|
A:HIS99
|
4.0
|
56.2
|
1.0
|
ND1
|
A:HIS99
|
4.2
|
57.9
|
1.0
|
CD
|
A:ARG153
|
4.4
|
57.3
|
1.0
|
SG
|
A:CYS103
|
4.5
|
55.1
|
1.0
|
CD2
|
A:LEU114
|
4.6
|
46.2
|
1.0
|
O
|
A:PRO100
|
4.6
|
57.8
|
1.0
|
SG
|
A:CYS112
|
4.8
|
58.0
|
1.0
|
CB
|
A:ARG153
|
4.8
|
45.2
|
1.0
|
SG
|
A:CYS106
|
4.9
|
52.4
|
1.0
|
CD1
|
B:LEU498
|
4.9
|
57.7
|
1.0
|
|
Iron binding site 4 out
of 144 in 7q5y
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Iron Binding Sites List in 7q5y
Iron binding site 4 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:50.0
occ:1.00
|
FE4
|
A:SF4701
|
0.0
|
50.0
|
1.0
|
S3
|
A:SF4701
|
2.2
|
51.7
|
1.0
|
S1
|
A:SF4701
|
2.3
|
47.8
|
1.0
|
S2
|
A:SF4701
|
2.3
|
45.1
|
1.0
|
SG
|
A:CYS112
|
2.3
|
58.0
|
1.0
|
FE2
|
A:SF4701
|
2.7
|
53.2
|
1.0
|
FE1
|
A:SF4701
|
2.7
|
49.4
|
1.0
|
FE3
|
A:SF4701
|
2.7
|
52.8
|
1.0
|
CB
|
A:CYS112
|
3.2
|
48.7
|
1.0
|
S4
|
A:SF4701
|
3.8
|
53.1
|
1.0
|
CB
|
A:GLN115
|
4.1
|
58.1
|
1.0
|
N
|
A:GLN115
|
4.3
|
55.9
|
1.0
|
NE2
|
A:HIS99
|
4.4
|
55.4
|
1.0
|
CA
|
A:CYS112
|
4.6
|
44.4
|
1.0
|
SG
|
A:CYS106
|
4.7
|
52.4
|
1.0
|
CB
|
A:LEU114
|
4.7
|
45.0
|
1.0
|
CB
|
A:LYS108
|
4.8
|
42.6
|
1.0
|
SG
|
A:CYS103
|
4.8
|
55.1
|
1.0
|
CA
|
A:GLN115
|
4.8
|
54.8
|
1.0
|
N
|
A:GLY209
|
4.8
|
48.9
|
1.0
|
NE2
|
A:GLN115
|
4.8
|
59.6
|
1.0
|
CB
|
A:VAL208
|
4.8
|
43.8
|
1.0
|
|
Iron binding site 5 out
of 144 in 7q5y
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Iron Binding Sites List in 7q5y
Iron binding site 5 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe702
b:41.2
occ:1.00
|
FE1
|
A:SF4702
|
0.0
|
41.2
|
1.0
|
S4
|
A:SF4702
|
2.2
|
41.9
|
1.0
|
S2
|
A:SF4702
|
2.2
|
49.7
|
1.0
|
SG
|
A:CYS206
|
2.3
|
57.6
|
1.0
|
S3
|
A:SF4702
|
2.3
|
39.2
|
1.0
|
FE3
|
A:SF4702
|
2.7
|
41.2
|
1.0
|
FE2
|
A:SF4702
|
2.7
|
44.1
|
1.0
|
FE4
|
A:SF4702
|
2.8
|
46.7
|
1.0
|
CB
|
A:CYS206
|
3.3
|
44.7
|
1.0
|
CA
|
A:CYS206
|
3.8
|
49.7
|
1.0
|
CB
|
A:ALA210
|
3.8
|
58.8
|
1.0
|
S1
|
A:SF4702
|
3.9
|
42.5
|
1.0
|
CD
|
A:PRO207
|
4.1
|
50.2
|
1.0
|
CG1
|
A:ILE211
|
4.4
|
35.4
|
1.0
|
CD1
|
A:ILE211
|
4.4
|
36.0
|
1.0
|
C
|
A:CYS206
|
4.6
|
52.6
|
1.0
|
CG2
|
A:VAL208
|
4.7
|
35.2
|
1.0
|
SG
|
A:CYS157
|
4.7
|
45.0
|
1.0
|
N
|
A:PRO207
|
4.7
|
47.0
|
1.0
|
SG
|
A:CYS160
|
4.7
|
47.6
|
1.0
|
N
|
A:ILE211
|
4.8
|
42.8
|
1.0
|
SG
|
A:CYS154
|
4.8
|
49.3
|
1.0
|
CA
|
A:ALA210
|
4.9
|
52.4
|
1.0
|
N
|
A:CYS206
|
4.9
|
46.1
|
1.0
|
|
Iron binding site 6 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 6 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe702
b:44.1
occ:1.00
|
FE2
|
A:SF4702
|
0.0
|
44.1
|
1.0
|
S1
|
A:SF4702
|
2.3
|
42.5
|
1.0
|
S3
|
A:SF4702
|
2.3
|
39.2
|
1.0
|
SG
|
A:CYS154
|
2.3
|
49.3
|
1.0
|
S4
|
A:SF4702
|
2.3
|
41.9
|
1.0
|
FE3
|
A:SF4702
|
2.7
|
41.2
|
1.0
|
FE4
|
A:SF4702
|
2.7
|
46.7
|
1.0
|
FE1
|
A:SF4702
|
2.7
|
41.2
|
1.0
|
CB
|
A:CYS154
|
3.5
|
36.8
|
1.0
|
S2
|
A:SF4702
|
3.8
|
49.7
|
1.0
|
CA
|
A:CYS154
|
3.9
|
43.9
|
1.0
|
N
|
A:VAL155
|
4.2
|
43.1
|
1.0
|
CB
|
A:ALA210
|
4.2
|
58.8
|
1.0
|
CA
|
A:VAL156
|
4.2
|
56.3
|
1.0
|
N
|
A:VAL156
|
4.3
|
63.3
|
1.0
|
CG1
|
A:ILE184
|
4.4
|
46.9
|
1.0
|
C
|
A:CYS154
|
4.5
|
49.6
|
1.0
|
CE1
|
A:TYR149
|
4.5
|
44.7
|
1.0
|
N
|
A:CYS157
|
4.6
|
43.2
|
1.0
|
OH
|
A:TYR149
|
4.7
|
52.4
|
1.0
|
SG
|
A:CYS206
|
4.8
|
57.6
|
1.0
|
SG
|
A:CYS160
|
4.9
|
47.6
|
1.0
|
C
|
A:VAL155
|
4.9
|
60.9
|
1.0
|
SG
|
A:CYS157
|
5.0
|
45.0
|
1.0
|
|
Iron binding site 7 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 7 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe702
b:41.2
occ:1.00
|
FE3
|
A:SF4702
|
0.0
|
41.2
|
1.0
|
S2
|
A:SF4702
|
2.2
|
49.7
|
1.0
|
S4
|
A:SF4702
|
2.3
|
41.9
|
1.0
|
S1
|
A:SF4702
|
2.3
|
42.5
|
1.0
|
SG
|
A:CYS160
|
2.3
|
47.6
|
1.0
|
FE1
|
A:SF4702
|
2.7
|
41.2
|
1.0
|
FE2
|
A:SF4702
|
2.7
|
44.1
|
1.0
|
FE4
|
A:SF4702
|
2.7
|
46.7
|
1.0
|
CB
|
A:CYS160
|
3.5
|
45.6
|
1.0
|
S3
|
A:SF4702
|
3.8
|
39.2
|
1.0
|
N
|
A:CYS160
|
4.0
|
47.4
|
1.0
|
CG1
|
A:ILE184
|
4.1
|
46.9
|
1.0
|
CD1
|
A:ILE211
|
4.2
|
36.0
|
1.0
|
CA
|
A:CYS160
|
4.4
|
47.1
|
1.0
|
CD1
|
A:ILE184
|
4.7
|
31.8
|
1.0
|
SG
|
A:CYS157
|
4.7
|
45.0
|
1.0
|
SG
|
A:CYS154
|
4.7
|
49.3
|
1.0
|
N
|
A:ARG159
|
4.7
|
44.7
|
1.0
|
SG
|
A:CYS206
|
4.8
|
57.6
|
1.0
|
N
|
A:TYR158
|
4.8
|
42.0
|
1.0
|
CG1
|
A:ILE211
|
4.8
|
35.4
|
1.0
|
|
Iron binding site 8 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 8 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe702
b:46.7
occ:1.00
|
FE4
|
A:SF4702
|
0.0
|
46.7
|
1.0
|
S1
|
A:SF4702
|
2.3
|
42.5
|
1.0
|
S3
|
A:SF4702
|
2.3
|
39.2
|
1.0
|
S2
|
A:SF4702
|
2.3
|
49.7
|
1.0
|
SG
|
A:CYS157
|
2.3
|
45.0
|
1.0
|
FE2
|
A:SF4702
|
2.7
|
44.1
|
1.0
|
FE3
|
A:SF4702
|
2.7
|
41.2
|
1.0
|
FE1
|
A:SF4702
|
2.8
|
41.2
|
1.0
|
CB
|
A:CYS157
|
3.4
|
35.8
|
1.0
|
N
|
A:CYS157
|
3.5
|
43.2
|
1.0
|
N
|
A:TYR158
|
3.8
|
42.0
|
1.0
|
S4
|
A:SF4702
|
3.9
|
41.9
|
1.0
|
CA
|
A:CYS157
|
3.9
|
37.4
|
1.0
|
CD
|
A:PRO207
|
4.0
|
50.2
|
1.0
|
C
|
A:CYS157
|
4.1
|
48.8
|
1.0
|
N
|
A:ARG159
|
4.2
|
44.7
|
1.0
|
C
|
A:VAL156
|
4.6
|
54.5
|
1.0
|
CA
|
A:VAL156
|
4.6
|
56.3
|
1.0
|
SG
|
A:CYS160
|
4.6
|
47.6
|
1.0
|
SG
|
A:CYS206
|
4.7
|
57.6
|
1.0
|
CG
|
A:PRO207
|
4.7
|
43.3
|
1.0
|
SG
|
A:CYS154
|
4.7
|
49.3
|
1.0
|
CB
|
A:ARG159
|
4.8
|
35.9
|
1.0
|
CA
|
A:TYR158
|
4.8
|
39.7
|
1.0
|
CG2
|
A:VAL155
|
4.8
|
37.6
|
1.0
|
N
|
A:VAL156
|
4.9
|
63.3
|
1.0
|
N
|
A:CYS160
|
4.9
|
47.4
|
1.0
|
C
|
A:TYR158
|
4.9
|
43.8
|
1.0
|
|
Iron binding site 9 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 9 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe703
b:46.0
occ:1.00
|
FE1
|
A:SF4703
|
0.0
|
46.0
|
1.0
|
S2
|
A:SF4703
|
2.2
|
42.8
|
1.0
|
S3
|
A:SF4703
|
2.3
|
42.4
|
1.0
|
SG
|
A:CYS235
|
2.3
|
46.0
|
1.0
|
S4
|
A:SF4703
|
2.3
|
47.3
|
1.0
|
FE4
|
A:SF4703
|
2.6
|
45.2
|
1.0
|
FE3
|
A:SF4703
|
2.7
|
38.2
|
1.0
|
FE2
|
A:SF4703
|
2.8
|
37.1
|
1.0
|
CB
|
A:CYS235
|
3.3
|
43.2
|
1.0
|
S1
|
A:SF4703
|
3.9
|
41.1
|
1.0
|
O
|
A:HOH821
|
3.9
|
44.0
|
1.0
|
N
|
A:CYS235
|
3.9
|
30.8
|
1.0
|
CA
|
A:CYS235
|
4.0
|
34.4
|
1.0
|
CB
|
A:VAL237
|
4.0
|
48.1
|
1.0
|
C
|
A:CYS235
|
4.2
|
38.9
|
1.0
|
CG2
|
A:VAL237
|
4.2
|
47.2
|
1.0
|
O
|
A:CYS235
|
4.3
|
40.9
|
1.0
|
N
|
A:VAL237
|
4.4
|
43.7
|
1.0
|
C
|
A:LEU234
|
4.6
|
40.2
|
1.0
|
SG
|
A:CYS268
|
4.6
|
43.3
|
1.0
|
SG
|
A:CYS232
|
4.7
|
47.2
|
1.0
|
SG
|
A:CYS239
|
4.8
|
47.0
|
1.0
|
CA
|
A:VAL237
|
4.8
|
47.0
|
1.0
|
N
|
A:PRO236
|
5.0
|
41.9
|
1.0
|
|
Iron binding site 10 out
of 144 in 7q5y
Go back to
Iron Binding Sites List in 7q5y
Iron binding site 10 out
of 144 in the Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe703
b:37.1
occ:1.00
|
FE2
|
A:SF4703
|
0.0
|
37.1
|
1.0
|
S1
|
A:SF4703
|
2.2
|
41.1
|
1.0
|
SG
|
A:CYS268
|
2.3
|
43.3
|
1.0
|
S4
|
A:SF4703
|
2.3
|
47.3
|
1.0
|
S3
|
A:SF4703
|
2.3
|
42.4
|
1.0
|
FE3
|
A:SF4703
|
2.7
|
38.2
|
1.0
|
FE4
|
A:SF4703
|
2.7
|
45.2
|
1.0
|
FE1
|
A:SF4703
|
2.8
|
46.0
|
1.0
|
CB
|
A:CYS268
|
3.2
|
30.7
|
1.0
|
N
|
A:CYS268
|
3.7
|
44.7
|
1.0
|
S2
|
A:SF4703
|
3.9
|
42.8
|
1.0
|
CA
|
A:CYS268
|
4.0
|
36.6
|
1.0
|
N
|
A:GLY271
|
4.3
|
43.9
|
1.0
|
O
|
A:HOH821
|
4.4
|
44.0
|
1.0
|
CG2
|
A:VAL385
|
4.6
|
36.0
|
1.0
|
C
|
A:CYS268
|
4.6
|
42.0
|
1.0
|
C
|
A:ILE267
|
4.6
|
49.5
|
1.0
|
SG
|
A:CYS235
|
4.6
|
46.0
|
1.0
|
CB
|
A:LYS270
|
4.7
|
29.9
|
1.0
|
O
|
A:CYS268
|
4.7
|
46.4
|
1.0
|
CA
|
A:GLY271
|
4.7
|
38.9
|
1.0
|
SG
|
A:CYS239
|
4.8
|
47.0
|
1.0
|
SG
|
A:CYS232
|
4.8
|
47.2
|
1.0
|
CA
|
A:ILE267
|
4.9
|
41.7
|
1.0
|
NZ
|
A:LYS270
|
5.0
|
55.2
|
1.0
|
|
Reference:
E.Warkentin,
U.Ermler,
G.Peng.
Structure of Nadh:Ubichinon Oxidoreductase (Complex I) of the Hyperthermophilic Eubacterium Aquifex Aeolicus To Be Published.
Page generated: Thu Aug 8 17:59:24 2024
|