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Iron in PDB 7q7f: Room Temperature Structure of the Rhodobacter Sphaeroides Photosynthetic Reaction Center F(M197)H Mutant at Atmospheric Pressure

Protein crystallography data

The structure of Room Temperature Structure of the Rhodobacter Sphaeroides Photosynthetic Reaction Center F(M197)H Mutant at Atmospheric Pressure, PDB code: 7q7f was solved by J.Lieske, S.Guenther, S.Saouane, G.K.Selikhanov, A.G.Gabdulkhakov, A.Meents, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.07 / 2.75
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 102.5, 102.5, 237.84, 90, 90, 90
R / Rfree (%) 17.9 / 22.4

Other elements in 7q7f:

The structure of Room Temperature Structure of the Rhodobacter Sphaeroides Photosynthetic Reaction Center F(M197)H Mutant at Atmospheric Pressure also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Room Temperature Structure of the Rhodobacter Sphaeroides Photosynthetic Reaction Center F(M197)H Mutant at Atmospheric Pressure (pdb code 7q7f). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Room Temperature Structure of the Rhodobacter Sphaeroides Photosynthetic Reaction Center F(M197)H Mutant at Atmospheric Pressure, PDB code: 7q7f:

Iron binding site 1 out of 1 in 7q7f

Go back to Iron Binding Sites List in 7q7f
Iron binding site 1 out of 1 in the Room Temperature Structure of the Rhodobacter Sphaeroides Photosynthetic Reaction Center F(M197)H Mutant at Atmospheric Pressure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Room Temperature Structure of the Rhodobacter Sphaeroides Photosynthetic Reaction Center F(M197)H Mutant at Atmospheric Pressure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Fe404

b:30.1
occ:1.00
OE2 M:GLU234 2.1 35.9 1.0
NE2 M:HIS219 2.2 30.9 1.0
NE2 L:HIS190 2.2 29.8 1.0
NE2 M:HIS266 2.3 30.1 1.0
NE2 L:HIS230 2.4 30.6 1.0
OE1 M:GLU234 2.5 33.5 1.0
CD M:GLU234 2.6 31.7 1.0
CE1 L:HIS190 3.0 29.4 1.0
HE1 L:HIS190 3.0 35.2 1.0
CE1 M:HIS266 3.1 29.8 1.0
CE1 M:HIS219 3.1 31.1 1.0
HE1 M:HIS266 3.1 35.7 1.0
HE1 M:HIS219 3.2 37.3 1.0
CE1 L:HIS230 3.2 31.2 1.0
CD2 M:HIS219 3.3 31.1 1.0
HE1 L:HIS230 3.3 37.4 1.0
CD2 M:HIS266 3.4 30.2 1.0
CD2 L:HIS190 3.4 30.1 1.0
CD2 L:HIS230 3.4 30.7 1.0
HD2 M:HIS219 3.5 37.2 1.0
HD2 M:HIS266 3.6 36.2 1.0
HD2 L:HIS230 3.7 36.8 1.0
HG13 M:ILE223 3.7 33.6 1.0
HD2 L:HIS190 3.7 36.0 1.0
HG21 L:VAL194 3.8 36.3 1.0
CG M:GLU234 4.1 28.0 1.0
ND1 L:HIS190 4.2 29.8 1.0
ND1 M:HIS266 4.3 30.0 1.0
ND1 M:HIS219 4.3 31.3 1.0
HD11 M:ILE223 4.4 33.8 1.0
CG M:HIS219 4.4 31.4 1.0
ND1 L:HIS230 4.4 31.1 1.0
CG L:HIS190 4.4 30.0 1.0
CG M:HIS266 4.4 30.2 1.0
HG2 M:GLU234 4.4 33.6 1.0
CG L:HIS230 4.5 31.3 1.0
CG1 M:ILE223 4.5 28.0 1.0
HG3 M:GLU234 4.6 33.6 1.0
CG2 L:VAL194 4.7 30.3 1.0
HG12 M:ILE223 4.7 33.6 1.0
O M:HOH509 4.8 25.6 1.0
HB2 M:GLU234 4.9 31.2 1.0
HG23 M:ILE265 4.9 31.4 1.0
HD1 L:HIS190 4.9 35.7 1.0
HG23 L:VAL194 4.9 36.3 1.0
CD1 M:ILE223 4.9 28.2 1.0
HB3 M:GLU234 5.0 31.2 1.0
HD1 M:HIS266 5.0 35.9 1.0
CB M:GLU234 5.0 26.1 1.0

Reference:

J.Lieske, S.Saouane, S.Guenther, J.Meyer, T.Pakendorf, B.Reime, A.Burkhardt, E.Crosas, J.Hakanpaeae, K.Stachnik, J.Sieg, M.Rarey, M.H.Abdellatif, A.G.Gabdulkhakov, G.K.Selikhanov, H.N.Chapman, A.Meents. Fixed-Target High-Pressure Macromolecular Crystallography To Be Published.
Page generated: Thu Aug 8 18:03:10 2024

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