Iron in PDB 7tc8: Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene)

All present enzymatic activity of Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene):
1.14.13.25;

The binding sites of Iron atom in the Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene) (pdb code 7tc8). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene), PDB code: 7tc8:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene) within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe601 b:29.3 occ:1.00 OE2 D:GLU209 1.7 19.5 1.0 ND1 D:HIS246 2.0 16.0 1.0 OE1 D:GLU243 2.1 17.4 1.0 CE1 D:HIS246 2.9 16.0 1.0 CD D:GLU243 2.9 17.4 1.0 CD D:GLU209 2.9 19.5 1.0 OE2 D:GLU243 3.0 17.4 1.0 CG D:HIS246 3.0 16.0 1.0 FE D:FE602 3.3 21.9 1.0 OE2 D:GLU144 3.4 11.1 1.0 CB D:HIS246 3.5 16.0 1.0 OE1 D:GLU209 3.8 19.5 1.0 HE22 D:GLN140 3.8 13.3 1.0 CG D:GLU209 3.9 19.5 1.0 NE2 D:GLN140 4.0 13.3 1.0 HE21 D:GLN140 4.0 13.3 1.0 NE2 D:HIS246 4.0 16.0 1.0 CD2 D:HIS246 4.1 16.0 1.0 CD D:GLU144 4.2 11.1 1.0 OE1 D:GLU144 4.3 11.1 1.0 CE1 D:HIS147 4.3 10.6 1.0 CG D:GLU243 4.4 17.4 1.0 ND1 D:HIS147 4.4 10.6 1.0 CA D:GLU243 4.8 17.4 1.0 HE2 D:HIS246 4.8 16.0 1.0 CD D:GLN140 4.8 13.3 1.0 CB D:GLU243 4.8 17.4 1.0 CB D:GLU209 4.9 19.5 1.0 CA D:HIS246 5.0 16.0 1.0

Iron binding site 2 out of 4 in the Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene) within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe602 b:21.9 occ:1.00 OE1 D:GLU114 2.1 10.8 1.0 ND1 D:HIS147 2.2 10.6 1.0 OE1 D:GLU144 2.7 11.1 1.0 CD D:GLU114 3.1 10.8 1.0 CE1 D:HIS147 3.1 10.6 1.0 FE D:FE601 3.3 29.3 1.0 CG D:HIS147 3.3 10.6 1.0 OE2 D:GLU114 3.4 10.8 1.0 OE2 D:GLU243 3.4 17.4 1.0 CD D:GLU144 3.6 11.1 1.0 CB D:HIS147 3.6 10.6 1.0 OE2 D:GLU144 3.7 11.1 1.0 OE2 D:GLU209 4.2 19.5 1.0 NE2 D:HIS147 4.2 10.6 1.0 CD2 D:HIS147 4.3 10.6 1.0 CD D:GLU243 4.3 17.4 1.0 CG D:GLU114 4.4 10.8 1.0 CE1 D:HIS246 4.4 16.0 1.0 ND1 D:HIS246 4.5 16.0 1.0 OE1 D:GLU243 4.5 17.4 1.0 CG2 D:ILE239 4.7 13.2 1.0 CB D:GLU114 4.7 10.8 1.0 HE2 D:HIS147 5.0 10.6 1.0 CG D:GLU144 5.0 11.1 1.0

Iron binding site 3 out of 4 in the Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene) within 5.0Å range: probe atom residue distance (Å) B Occ E:Fe601 b:30.1 occ:1.00 OE2 E:GLU209 1.7 20.1 1.0 ND1 E:HIS246 1.9 16.3 1.0 OE1 E:GLU243 2.5 17.8 1.0 CE1 E:HIS246 2.8 16.3 1.0 OE2 E:GLU144 2.9 11.1 1.0 CD E:GLU209 2.9 20.1 1.0 CG E:HIS246 3.0 16.3 1.0 FE E:FE602 3.4 19.0 1.0 CB E:HIS246 3.4 16.3 1.0 CD E:GLU243 3.4 17.8 1.0 HE22 E:GLN140 3.6 13.6 1.0 OE2 E:GLU243 3.6 17.8 1.0 OE1 E:GLU209 3.6 20.1 1.0 CD E:GLU144 3.7 11.1 1.0 NE2 E:GLN140 3.7 13.6 1.0 OE1 E:GLU144 3.8 11.1 1.0 HE21 E:GLN140 3.8 13.6 1.0 CG E:GLU209 3.9 20.1 1.0 NE2 E:HIS246 4.0 16.3 1.0 CD2 E:HIS246 4.0 16.3 1.0 CD E:GLN140 4.4 13.6 1.0 CE1 E:HIS147 4.4 10.7 1.0 ND1 E:HIS147 4.4 10.7 1.0 HE2 E:HIS246 4.7 16.3 1.0 CG E:GLN140 4.8 13.6 1.0 CG E:GLU243 4.8 17.8 1.0 CA E:HIS246 4.9 16.3 1.0

Iron binding site 4 out of 4 in the Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryo-Em Structure of Methane Monooxygenase Hydroxylase (By Graphene) within 5.0Å range: probe atom residue distance (Å) B Occ E:Fe602 b:19.0 occ:1.00 OE1 E:GLU114 1.9 11.1 1.0 OE1 E:GLU144 2.3 11.1 1.0 ND1 E:HIS147 2.3 10.7 1.0 CD E:GLU114 2.9 11.1 1.0 CE1 E:HIS147 3.3 10.7 1.0 CG E:HIS147 3.3 10.7 1.0 CD E:GLU144 3.3 11.1 1.0 FE E:FE601 3.4 30.1 1.0 OE2 E:GLU114 3.5 11.1 1.0 CB E:HIS147 3.5 10.7 1.0 OE2 E:GLU144 3.6 11.1 1.0 CG E:GLU114 4.1 11.1 1.0 CB E:GLU114 4.2 11.1 1.0 OE2 E:GLU209 4.4 20.1 1.0 OE2 E:GLU243 4.4 17.8 1.0 NE2 E:HIS147 4.4 10.7 1.0 CD2 E:HIS147 4.4 10.7 1.0 OE1 E:GLU243 4.5 17.8 1.0 CA E:GLU114 4.5 11.1 1.0 CE1 E:HIS246 4.6 16.3 1.0 ND1 E:HIS246 4.6 16.3 1.0 CA E:GLU144 4.6 11.1 1.0 CG E:GLU144 4.7 11.1 1.0 CD E:GLU243 4.8 17.8 1.0 O E:ASP143 4.8 12.2 1.0 CB E:GLU144 5.0 11.1 1.0 CG2 E:ILE239 5.0 13.5 1.0

E.J.Ahn, B.C.Kim, U.S.Cho. Batch Production of High-Quality Graphene Grids For Cryo-Em: Cryo-Em Structure of Methylococcus Capsulatus Soluble Methane Monooxygenase Hydroxylase To Be Published.