Iron in PDB 7tlj: Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Enzymatic activity of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
All present enzymatic activity of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex:
7.1.1.8;
Iron Binding Sites:
The binding sites of Iron atom in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
(pdb code 7tlj). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the
Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex, PDB code: 7tlj:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 1 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe1001
b:88.3
occ:1.00
|
FE
|
A:HEM1001
|
0.0
|
88.3
|
1.0
|
NE2
|
A:HIS97
|
2.0
|
48.6
|
1.0
|
NC
|
A:HEM1001
|
2.0
|
40.7
|
1.0
|
NE2
|
A:HIS198
|
2.0
|
49.4
|
1.0
|
ND
|
A:HEM1001
|
2.0
|
47.1
|
1.0
|
NA
|
A:HEM1001
|
2.0
|
49.3
|
1.0
|
NB
|
A:HEM1001
|
2.0
|
48.8
|
1.0
|
CE1
|
A:HIS198
|
2.9
|
44.9
|
1.0
|
CE1
|
A:HIS97
|
2.9
|
38.7
|
1.0
|
HE1
|
A:HIS198
|
3.0
|
44.9
|
1.0
|
C4C
|
A:HEM1001
|
3.0
|
41.8
|
1.0
|
HE1
|
A:HIS97
|
3.0
|
44.4
|
1.0
|
C1D
|
A:HEM1001
|
3.0
|
51.5
|
1.0
|
C4D
|
A:HEM1001
|
3.1
|
37.0
|
1.0
|
C1C
|
A:HEM1001
|
3.1
|
44.0
|
1.0
|
C1A
|
A:HEM1001
|
3.1
|
50.8
|
1.0
|
C4B
|
A:HEM1001
|
3.1
|
48.8
|
1.0
|
C4A
|
A:HEM1001
|
3.1
|
46.8
|
1.0
|
C1B
|
A:HEM1001
|
3.1
|
39.7
|
1.0
|
CD2
|
A:HIS97
|
3.1
|
47.1
|
1.0
|
CD2
|
A:HIS198
|
3.1
|
45.5
|
1.0
|
HD2
|
A:HIS97
|
3.4
|
44.4
|
1.0
|
HD2
|
A:HIS198
|
3.4
|
44.5
|
1.0
|
CHD
|
A:HEM1001
|
3.4
|
50.0
|
1.0
|
CHC
|
A:HEM1001
|
3.4
|
48.6
|
1.0
|
CHA
|
A:HEM1001
|
3.4
|
39.9
|
1.0
|
CHB
|
A:HEM1001
|
3.4
|
39.7
|
1.0
|
HA3
|
A:GLY146
|
4.0
|
45.3
|
1.0
|
ND1
|
A:HIS198
|
4.0
|
52.5
|
1.0
|
ND1
|
A:HIS97
|
4.1
|
35.9
|
1.0
|
CG
|
A:HIS198
|
4.2
|
51.5
|
1.0
|
CG
|
A:HIS97
|
4.2
|
46.7
|
1.0
|
C3C
|
A:HEM1001
|
4.2
|
49.7
|
1.0
|
C2D
|
A:HEM1001
|
4.3
|
50.0
|
1.0
|
C2C
|
A:HEM1001
|
4.3
|
51.9
|
1.0
|
C3D
|
A:HEM1001
|
4.3
|
47.9
|
1.0
|
C2A
|
A:HEM1001
|
4.3
|
48.9
|
1.0
|
C3A
|
A:HEM1001
|
4.3
|
49.5
|
1.0
|
C3B
|
A:HEM1001
|
4.3
|
41.5
|
1.0
|
C2B
|
A:HEM1001
|
4.3
|
44.6
|
1.0
|
HHD
|
A:HEM1001
|
4.4
|
49.8
|
1.0
|
HHC
|
A:HEM1001
|
4.4
|
48.2
|
1.0
|
HHA
|
A:HEM1001
|
4.4
|
48.4
|
1.0
|
HHB
|
A:HEM1001
|
4.4
|
47.4
|
1.0
|
HA2
|
A:GLY146
|
4.4
|
46.5
|
1.0
|
HA3
|
A:GLY62
|
4.5
|
46.1
|
1.0
|
HD12
|
A:LEU149
|
4.6
|
43.2
|
1.0
|
CA
|
A:GLY146
|
4.7
|
37.8
|
1.0
|
HA2
|
A:GLY62
|
4.7
|
47.1
|
1.0
|
HG22
|
A:THR142
|
5.0
|
45.7
|
1.0
|
|
Iron binding site 2 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 2 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe1002
b:73.1
occ:1.00
|
FE
|
A:HEM1002
|
0.0
|
73.1
|
1.0
|
NA
|
A:HEM1002
|
2.0
|
46.3
|
1.0
|
ND
|
A:HEM1002
|
2.0
|
52.1
|
1.0
|
NE2
|
A:HIS111
|
2.0
|
37.4
|
1.0
|
NE2
|
A:HIS212
|
2.0
|
41.4
|
1.0
|
NB
|
A:HEM1002
|
2.1
|
46.0
|
1.0
|
NC
|
A:HEM1002
|
2.1
|
39.2
|
1.0
|
CD2
|
A:HIS212
|
2.9
|
41.1
|
1.0
|
CD2
|
A:HIS111
|
2.9
|
42.8
|
1.0
|
HD2
|
A:HIS212
|
3.0
|
42.3
|
1.0
|
C1A
|
A:HEM1002
|
3.0
|
44.0
|
1.0
|
C4D
|
A:HEM1002
|
3.0
|
47.2
|
1.0
|
HD2
|
A:HIS111
|
3.0
|
44.1
|
1.0
|
C4A
|
A:HEM1002
|
3.0
|
39.9
|
1.0
|
C1D
|
A:HEM1002
|
3.0
|
40.2
|
1.0
|
CE1
|
A:HIS111
|
3.1
|
43.7
|
1.0
|
C1B
|
A:HEM1002
|
3.1
|
43.8
|
1.0
|
C4C
|
A:HEM1002
|
3.1
|
40.3
|
1.0
|
C4B
|
A:HEM1002
|
3.1
|
41.8
|
1.0
|
C1C
|
A:HEM1002
|
3.1
|
39.0
|
1.0
|
CE1
|
A:HIS212
|
3.1
|
39.5
|
1.0
|
CHA
|
A:HEM1002
|
3.3
|
40.6
|
1.0
|
HE1
|
A:HIS111
|
3.3
|
44.3
|
1.0
|
HE1
|
A:HIS212
|
3.4
|
42.9
|
1.0
|
CHB
|
A:HEM1002
|
3.4
|
42.0
|
1.0
|
CHD
|
A:HEM1002
|
3.4
|
34.6
|
1.0
|
CHC
|
A:HEM1002
|
3.5
|
45.8
|
1.0
|
CG
|
A:HIS111
|
4.0
|
46.6
|
1.0
|
CG
|
A:HIS212
|
4.1
|
47.8
|
1.0
|
ND1
|
A:HIS111
|
4.1
|
42.6
|
1.0
|
ND1
|
A:HIS212
|
4.1
|
44.5
|
1.0
|
C2A
|
A:HEM1002
|
4.2
|
47.9
|
1.0
|
C3D
|
A:HEM1002
|
4.2
|
41.8
|
1.0
|
C3A
|
A:HEM1002
|
4.2
|
44.4
|
1.0
|
C2D
|
A:HEM1002
|
4.2
|
43.0
|
1.0
|
C2B
|
A:HEM1002
|
4.3
|
44.7
|
1.0
|
HHA
|
A:HEM1002
|
4.3
|
45.6
|
1.0
|
C3B
|
A:HEM1002
|
4.3
|
37.4
|
1.0
|
C3C
|
A:HEM1002
|
4.3
|
42.3
|
1.0
|
C2C
|
A:HEM1002
|
4.3
|
42.5
|
1.0
|
HHB
|
A:HEM1002
|
4.4
|
46.2
|
1.0
|
HHD
|
A:HEM1002
|
4.4
|
45.3
|
1.0
|
HHC
|
A:HEM1002
|
4.5
|
46.9
|
1.0
|
HG22
|
A:THR128
|
4.8
|
45.5
|
1.0
|
HD13
|
A:LEU51
|
4.8
|
44.2
|
1.0
|
HD12
|
A:LEU51
|
4.9
|
43.7
|
1.0
|
HH22
|
A:ARG114
|
4.9
|
46.8
|
1.0
|
|
Iron binding site 3 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 3 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe1001
b:78.6
occ:1.00
|
FE
|
B:HEC1001
|
0.0
|
78.6
|
1.0
|
NA
|
B:HEC1001
|
2.0
|
56.4
|
1.0
|
NE2
|
B:HIS40
|
2.0
|
54.0
|
1.0
|
ND
|
B:HEC1001
|
2.0
|
52.7
|
1.0
|
NB
|
B:HEC1001
|
2.1
|
44.4
|
1.0
|
NC
|
B:HEC1001
|
2.1
|
53.2
|
1.0
|
SD
|
B:MET185
|
2.2
|
49.9
|
1.0
|
CE1
|
B:HIS40
|
2.9
|
52.5
|
1.0
|
C1A
|
B:HEC1001
|
3.0
|
51.0
|
1.0
|
C4D
|
B:HEC1001
|
3.0
|
44.3
|
1.0
|
C4A
|
B:HEC1001
|
3.0
|
50.8
|
1.0
|
C1D
|
B:HEC1001
|
3.1
|
52.3
|
1.0
|
C1B
|
B:HEC1001
|
3.1
|
50.0
|
1.0
|
CD2
|
B:HIS40
|
3.1
|
49.8
|
1.0
|
C4C
|
B:HEC1001
|
3.1
|
51.2
|
1.0
|
C4B
|
B:HEC1001
|
3.1
|
48.7
|
1.0
|
HE1
|
B:HIS40
|
3.1
|
53.0
|
1.0
|
C1C
|
B:HEC1001
|
3.1
|
45.2
|
1.0
|
HD2
|
B:HIS40
|
3.3
|
52.7
|
1.0
|
CHA
|
B:HEC1001
|
3.4
|
43.0
|
1.0
|
CHB
|
B:HEC1001
|
3.4
|
51.1
|
1.0
|
CHD
|
B:HEC1001
|
3.4
|
50.5
|
1.0
|
CHC
|
B:HEC1001
|
3.5
|
47.4
|
1.0
|
CE
|
B:MET185
|
3.5
|
51.2
|
1.0
|
HG3
|
B:MET185
|
3.6
|
53.1
|
1.0
|
HE1
|
B:MET185
|
3.7
|
52.6
|
1.0
|
CG
|
B:MET185
|
3.7
|
56.6
|
1.0
|
HE2
|
B:MET185
|
3.8
|
50.8
|
1.0
|
ND1
|
B:HIS40
|
4.1
|
48.4
|
1.0
|
HB2
|
B:MET185
|
4.1
|
52.3
|
1.0
|
CG
|
B:HIS40
|
4.2
|
48.3
|
1.0
|
C2A
|
B:HEC1001
|
4.2
|
50.3
|
1.0
|
C3A
|
B:HEC1001
|
4.2
|
48.3
|
1.0
|
C3D
|
B:HEC1001
|
4.2
|
51.1
|
1.0
|
C2D
|
B:HEC1001
|
4.3
|
55.6
|
1.0
|
C2B
|
B:HEC1001
|
4.3
|
46.2
|
1.0
|
C3B
|
B:HEC1001
|
4.3
|
45.6
|
1.0
|
C3C
|
B:HEC1001
|
4.3
|
49.1
|
1.0
|
HE3
|
B:MET185
|
4.3
|
52.8
|
1.0
|
HHA
|
B:HEC1001
|
4.3
|
52.0
|
1.0
|
HG2
|
B:MET185
|
4.3
|
52.5
|
1.0
|
C2C
|
B:HEC1001
|
4.3
|
50.8
|
1.0
|
HHB
|
B:HEC1001
|
4.4
|
51.8
|
1.0
|
HHD
|
B:HEC1001
|
4.4
|
53.2
|
1.0
|
HHC
|
B:HEC1001
|
4.5
|
52.2
|
1.0
|
CB
|
B:MET185
|
4.5
|
50.1
|
1.0
|
HB1
|
B:ALA97
|
4.6
|
56.7
|
1.0
|
HB2
|
B:CYS39
|
4.8
|
54.6
|
1.0
|
HB3
|
B:MET185
|
4.8
|
52.5
|
1.0
|
HD21
|
B:LEU100
|
4.8
|
51.1
|
1.0
|
HD2
|
B:PRO98
|
4.8
|
52.8
|
1.0
|
HD11
|
B:LEU100
|
4.9
|
50.2
|
1.0
|
|
Iron binding site 4 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 4 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe1001
b:83.9
occ:1.00
|
FE1
|
C:FES1001
|
0.0
|
83.9
|
1.0
|
S1
|
C:FES1001
|
2.2
|
63.5
|
1.0
|
S2
|
C:FES1001
|
2.2
|
57.6
|
1.0
|
SG
|
C:CYS149
|
2.2
|
57.8
|
1.0
|
SG
|
C:CYS129
|
2.3
|
62.2
|
1.0
|
HB3
|
C:CYS129
|
2.6
|
48.5
|
1.0
|
FE2
|
C:FES1001
|
2.7
|
70.6
|
1.0
|
CB
|
C:CYS129
|
2.8
|
38.5
|
1.0
|
HB2
|
C:CYS134
|
2.8
|
50.2
|
1.0
|
HB2
|
C:CYS129
|
2.9
|
48.6
|
1.0
|
HB3
|
C:HIS131
|
3.1
|
45.4
|
1.0
|
HB2
|
C:CYS151
|
3.5
|
55.6
|
1.0
|
H
|
C:CYS134
|
3.5
|
49.1
|
1.0
|
CB
|
C:CYS149
|
3.6
|
51.4
|
1.0
|
HB3
|
C:CYS149
|
3.6
|
52.8
|
1.0
|
H
|
C:LEU132
|
3.7
|
46.3
|
1.0
|
HB2
|
C:CYS149
|
3.7
|
54.2
|
1.0
|
CB
|
C:CYS134
|
3.8
|
52.9
|
1.0
|
CB
|
C:HIS131
|
4.1
|
40.1
|
1.0
|
H
|
C:HIS131
|
4.1
|
45.9
|
1.0
|
ND1
|
C:HIS152
|
4.1
|
59.1
|
1.0
|
HB3
|
C:CYS134
|
4.2
|
50.1
|
1.0
|
N
|
C:CYS134
|
4.2
|
44.0
|
1.0
|
CA
|
C:CYS129
|
4.3
|
42.8
|
1.0
|
H
|
C:HIS152
|
4.3
|
50.9
|
1.0
|
HB2
|
C:HIS131
|
4.3
|
44.2
|
1.0
|
H
|
C:GLY133
|
4.3
|
48.5
|
1.0
|
HB3
|
C:SER154
|
4.5
|
55.2
|
1.0
|
CB
|
C:CYS151
|
4.5
|
52.2
|
1.0
|
CA
|
C:CYS134
|
4.5
|
40.9
|
1.0
|
ND1
|
C:HIS131
|
4.5
|
44.6
|
1.0
|
N
|
C:LEU132
|
4.5
|
43.4
|
1.0
|
HB2
|
C:HIS152
|
4.6
|
50.8
|
1.0
|
SG
|
C:CYS134
|
4.7
|
61.0
|
1.0
|
HA
|
C:CYS129
|
4.7
|
48.3
|
1.0
|
H
|
C:CYS151
|
4.7
|
56.1
|
1.0
|
C
|
C:CYS129
|
4.8
|
49.4
|
1.0
|
HE1
|
C:HIS152
|
4.8
|
49.5
|
1.0
|
HB3
|
C:CYS151
|
4.8
|
55.1
|
1.0
|
CG
|
C:HIS131
|
4.8
|
42.4
|
1.0
|
N
|
C:HIS131
|
4.8
|
45.0
|
1.0
|
HB2
|
C:SER154
|
4.9
|
55.1
|
1.0
|
H
|
C:CYS129
|
4.9
|
50.1
|
1.0
|
C
|
C:CYS134
|
4.9
|
42.5
|
1.0
|
O
|
C:CYS134
|
4.9
|
52.4
|
1.0
|
CE1
|
C:HIS152
|
4.9
|
50.7
|
1.0
|
N
|
C:GLY133
|
4.9
|
49.6
|
1.0
|
CA
|
C:CYS149
|
4.9
|
44.6
|
1.0
|
N
|
C:HIS152
|
4.9
|
45.6
|
1.0
|
CA
|
C:HIS131
|
4.9
|
41.9
|
1.0
|
HB2
|
C:LEU132
|
5.0
|
47.0
|
1.0
|
|
Iron binding site 5 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 5 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe1001
b:70.6
occ:1.00
|
FE2
|
C:FES1001
|
0.0
|
70.6
|
1.0
|
ND1
|
C:HIS152
|
2.1
|
59.1
|
1.0
|
ND1
|
C:HIS131
|
2.1
|
44.6
|
1.0
|
S1
|
C:FES1001
|
2.2
|
63.5
|
1.0
|
S2
|
C:FES1001
|
2.2
|
57.6
|
1.0
|
HB3
|
C:HIS131
|
2.5
|
45.4
|
1.0
|
HB2
|
C:HIS152
|
2.6
|
50.8
|
1.0
|
FE1
|
C:FES1001
|
2.7
|
83.9
|
1.0
|
CG
|
C:HIS152
|
3.0
|
51.6
|
1.0
|
CG
|
C:HIS131
|
3.0
|
42.4
|
1.0
|
CB
|
C:HIS131
|
3.1
|
40.1
|
1.0
|
CE1
|
C:HIS152
|
3.1
|
50.7
|
1.0
|
CE1
|
C:HIS131
|
3.2
|
45.9
|
1.0
|
CB
|
C:HIS152
|
3.2
|
50.5
|
1.0
|
HE1
|
C:HIS152
|
3.4
|
49.5
|
1.0
|
HG2
|
C:PRO166
|
3.4
|
49.0
|
1.0
|
HB2
|
C:HIS131
|
3.5
|
44.2
|
1.0
|
HE1
|
C:HIS131
|
3.5
|
45.8
|
1.0
|
H
|
C:HIS152
|
3.8
|
50.9
|
1.0
|
H
|
C:LEU132
|
3.8
|
46.3
|
1.0
|
HB3
|
C:HIS152
|
3.9
|
49.8
|
1.0
|
HB2
|
C:CYS151
|
3.9
|
55.6
|
1.0
|
N
|
C:HIS152
|
4.1
|
45.6
|
1.0
|
SG
|
C:CYS129
|
4.1
|
62.2
|
1.0
|
CD2
|
C:HIS152
|
4.1
|
47.5
|
1.0
|
CD2
|
C:HIS131
|
4.2
|
41.8
|
1.0
|
NE2
|
C:HIS152
|
4.2
|
49.2
|
1.0
|
CA
|
C:HIS152
|
4.2
|
47.1
|
1.0
|
HB2
|
C:LEU132
|
4.2
|
47.0
|
1.0
|
HG3
|
C:PRO166
|
4.2
|
49.0
|
1.0
|
SG
|
C:CYS149
|
4.2
|
57.8
|
1.0
|
CG
|
C:PRO166
|
4.3
|
47.4
|
1.0
|
NE2
|
C:HIS131
|
4.3
|
41.2
|
1.0
|
N
|
C:LEU132
|
4.4
|
43.4
|
1.0
|
CA
|
C:HIS131
|
4.5
|
41.9
|
1.0
|
HB3
|
C:CYS151
|
4.5
|
55.1
|
1.0
|
HG
|
C:LEU132
|
4.5
|
46.4
|
1.0
|
HD12
|
C:LEU132
|
4.6
|
45.9
|
1.0
|
HB2
|
C:SER154
|
4.6
|
55.1
|
1.0
|
CB
|
C:CYS151
|
4.7
|
52.2
|
1.0
|
HD2
|
C:PRO166
|
4.7
|
49.7
|
1.0
|
H
|
C:HIS131
|
4.7
|
45.9
|
1.0
|
C
|
C:HIS131
|
4.8
|
44.4
|
1.0
|
HB2
|
C:CYS134
|
4.8
|
50.2
|
1.0
|
C
|
C:CYS151
|
4.8
|
49.7
|
1.0
|
C
|
C:HIS152
|
4.9
|
50.7
|
1.0
|
HB3
|
C:CYS129
|
4.9
|
48.5
|
1.0
|
HD2
|
C:HIS152
|
4.9
|
49.9
|
1.0
|
CB
|
C:LEU132
|
5.0
|
49.9
|
1.0
|
HE2
|
C:HIS152
|
5.0
|
50.2
|
1.0
|
HA
|
C:HIS152
|
5.0
|
49.8
|
1.0
|
HD2
|
C:HIS131
|
5.0
|
45.2
|
1.0
|
|
Iron binding site 6 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 6 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe1001
b:88.7
occ:1.00
|
FE
|
E:HEM1001
|
0.0
|
88.7
|
1.0
|
NC
|
E:HEM1001
|
2.0
|
44.3
|
1.0
|
NE2
|
E:HIS97
|
2.0
|
48.8
|
1.0
|
NE2
|
E:HIS198
|
2.0
|
47.3
|
1.0
|
ND
|
E:HEM1001
|
2.0
|
47.5
|
1.0
|
NA
|
E:HEM1001
|
2.0
|
52.4
|
1.0
|
NB
|
E:HEM1001
|
2.0
|
49.1
|
1.0
|
CE1
|
E:HIS97
|
2.9
|
37.3
|
1.0
|
CE1
|
E:HIS198
|
2.9
|
46.0
|
1.0
|
HE1
|
E:HIS97
|
3.0
|
44.5
|
1.0
|
C4C
|
E:HEM1001
|
3.0
|
45.0
|
1.0
|
HE1
|
E:HIS198
|
3.0
|
45.7
|
1.0
|
C1D
|
E:HEM1001
|
3.0
|
52.8
|
1.0
|
C1C
|
E:HEM1001
|
3.0
|
45.8
|
1.0
|
C4D
|
E:HEM1001
|
3.1
|
39.7
|
1.0
|
C1A
|
E:HEM1001
|
3.1
|
51.4
|
1.0
|
C4B
|
E:HEM1001
|
3.1
|
49.3
|
1.0
|
C4A
|
E:HEM1001
|
3.1
|
46.6
|
1.0
|
C1B
|
E:HEM1001
|
3.1
|
40.0
|
1.0
|
CD2
|
E:HIS198
|
3.1
|
46.5
|
1.0
|
CD2
|
E:HIS97
|
3.1
|
47.1
|
1.0
|
HD2
|
E:HIS198
|
3.3
|
45.5
|
1.0
|
HD2
|
E:HIS97
|
3.4
|
44.8
|
1.0
|
CHD
|
E:HEM1001
|
3.4
|
52.2
|
1.0
|
CHC
|
E:HEM1001
|
3.4
|
49.5
|
1.0
|
CHA
|
E:HEM1001
|
3.4
|
41.7
|
1.0
|
CHB
|
E:HEM1001
|
3.5
|
40.7
|
1.0
|
HA3
|
E:GLY146
|
3.9
|
45.7
|
1.0
|
ND1
|
E:HIS198
|
4.0
|
54.6
|
1.0
|
ND1
|
E:HIS97
|
4.0
|
38.4
|
1.0
|
CG
|
E:HIS198
|
4.2
|
51.2
|
1.0
|
CG
|
E:HIS97
|
4.2
|
48.0
|
1.0
|
C3C
|
E:HEM1001
|
4.2
|
50.6
|
1.0
|
C2D
|
E:HEM1001
|
4.3
|
50.5
|
1.0
|
C2C
|
E:HEM1001
|
4.3
|
51.4
|
1.0
|
C3D
|
E:HEM1001
|
4.3
|
49.3
|
1.0
|
HA2
|
E:GLY146
|
4.3
|
46.6
|
1.0
|
C2A
|
E:HEM1001
|
4.3
|
48.0
|
1.0
|
C3A
|
E:HEM1001
|
4.3
|
48.5
|
1.0
|
C3B
|
E:HEM1001
|
4.3
|
41.5
|
1.0
|
C2B
|
E:HEM1001
|
4.3
|
44.3
|
1.0
|
HHD
|
E:HEM1001
|
4.3
|
50.3
|
1.0
|
HHC
|
E:HEM1001
|
4.4
|
48.8
|
1.0
|
HHA
|
E:HEM1001
|
4.4
|
48.9
|
1.0
|
HHB
|
E:HEM1001
|
4.4
|
48.1
|
1.0
|
HA3
|
E:GLY62
|
4.5
|
47.0
|
1.0
|
CA
|
E:GLY146
|
4.6
|
34.4
|
1.0
|
HA2
|
E:GLY62
|
4.8
|
48.0
|
1.0
|
HD12
|
E:LEU149
|
4.8
|
43.7
|
1.0
|
HD1
|
E:HIS97
|
4.8
|
44.5
|
1.0
|
HG22
|
E:THR142
|
4.9
|
47.5
|
1.0
|
|
Iron binding site 7 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 7 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe1002
b:76.7
occ:1.00
|
FE
|
E:HEM1002
|
0.0
|
76.7
|
1.0
|
NA
|
E:HEM1002
|
2.0
|
45.7
|
1.0
|
ND
|
E:HEM1002
|
2.0
|
54.7
|
1.0
|
NE2
|
E:HIS111
|
2.0
|
38.8
|
1.0
|
NE2
|
E:HIS212
|
2.0
|
44.1
|
1.0
|
NC
|
E:HEM1002
|
2.0
|
43.4
|
1.0
|
NB
|
E:HEM1002
|
2.1
|
47.1
|
1.0
|
CD2
|
E:HIS111
|
2.9
|
44.3
|
1.0
|
CD2
|
E:HIS212
|
3.0
|
45.7
|
1.0
|
C1A
|
E:HEM1002
|
3.0
|
45.9
|
1.0
|
C4D
|
E:HEM1002
|
3.0
|
49.1
|
1.0
|
HD2
|
E:HIS111
|
3.0
|
46.6
|
1.0
|
C4A
|
E:HEM1002
|
3.0
|
41.6
|
1.0
|
C1D
|
E:HEM1002
|
3.0
|
43.1
|
1.0
|
CE1
|
E:HIS212
|
3.0
|
40.5
|
1.0
|
C4C
|
E:HEM1002
|
3.1
|
40.1
|
1.0
|
C1C
|
E:HEM1002
|
3.1
|
42.0
|
1.0
|
CE1
|
E:HIS111
|
3.1
|
47.1
|
1.0
|
C1B
|
E:HEM1002
|
3.1
|
47.4
|
1.0
|
C4B
|
E:HEM1002
|
3.1
|
42.4
|
1.0
|
HD2
|
E:HIS212
|
3.1
|
44.8
|
1.0
|
HE1
|
E:HIS212
|
3.3
|
44.6
|
1.0
|
HE1
|
E:HIS111
|
3.3
|
46.8
|
1.0
|
CHA
|
E:HEM1002
|
3.4
|
44.5
|
1.0
|
CHD
|
E:HEM1002
|
3.4
|
36.0
|
1.0
|
CHB
|
E:HEM1002
|
3.4
|
45.4
|
1.0
|
CHC
|
E:HEM1002
|
3.4
|
46.6
|
1.0
|
CG
|
E:HIS111
|
4.1
|
48.8
|
1.0
|
ND1
|
E:HIS111
|
4.1
|
48.9
|
1.0
|
ND1
|
E:HIS212
|
4.1
|
46.5
|
1.0
|
CG
|
E:HIS212
|
4.1
|
50.7
|
1.0
|
C2A
|
E:HEM1002
|
4.2
|
48.9
|
1.0
|
C3D
|
E:HEM1002
|
4.2
|
43.4
|
1.0
|
C3A
|
E:HEM1002
|
4.2
|
46.5
|
1.0
|
C2D
|
E:HEM1002
|
4.2
|
44.0
|
1.0
|
C3C
|
E:HEM1002
|
4.3
|
42.9
|
1.0
|
C2C
|
E:HEM1002
|
4.3
|
42.8
|
1.0
|
C2B
|
E:HEM1002
|
4.3
|
45.8
|
1.0
|
C3B
|
E:HEM1002
|
4.3
|
38.9
|
1.0
|
HHA
|
E:HEM1002
|
4.3
|
47.4
|
1.0
|
HHD
|
E:HEM1002
|
4.4
|
47.1
|
1.0
|
HHB
|
E:HEM1002
|
4.4
|
47.9
|
1.0
|
HHC
|
E:HEM1002
|
4.4
|
48.5
|
1.0
|
HD12
|
E:LEU51
|
4.7
|
45.6
|
1.0
|
HH22
|
E:ARG114
|
4.8
|
48.4
|
1.0
|
HG22
|
E:THR128
|
4.9
|
47.8
|
1.0
|
|
Iron binding site 8 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 8 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe1001
b:74.0
occ:1.00
|
FE
|
F:HEC1001
|
0.0
|
74.0
|
1.0
|
NE2
|
F:HIS40
|
2.0
|
54.6
|
1.0
|
NA
|
F:HEC1001
|
2.0
|
54.2
|
1.0
|
NB
|
F:HEC1001
|
2.0
|
47.8
|
1.0
|
NC
|
F:HEC1001
|
2.1
|
53.2
|
1.0
|
ND
|
F:HEC1001
|
2.1
|
51.0
|
1.0
|
SD
|
F:MET185
|
2.2
|
53.4
|
1.0
|
CE1
|
F:HIS40
|
3.0
|
55.3
|
1.0
|
CD2
|
F:HIS40
|
3.0
|
47.4
|
1.0
|
C1A
|
F:HEC1001
|
3.0
|
50.8
|
1.0
|
C4A
|
F:HEC1001
|
3.0
|
48.2
|
1.0
|
C4B
|
F:HEC1001
|
3.0
|
49.1
|
1.0
|
C1B
|
F:HEC1001
|
3.0
|
53.3
|
1.0
|
C1C
|
F:HEC1001
|
3.1
|
47.6
|
1.0
|
C4D
|
F:HEC1001
|
3.1
|
45.8
|
1.0
|
C4C
|
F:HEC1001
|
3.1
|
50.0
|
1.0
|
C1D
|
F:HEC1001
|
3.1
|
53.1
|
1.0
|
HE1
|
F:HIS40
|
3.2
|
52.7
|
1.0
|
HD2
|
F:HIS40
|
3.2
|
52.5
|
1.0
|
CHB
|
F:HEC1001
|
3.4
|
48.3
|
1.0
|
CHC
|
F:HEC1001
|
3.4
|
46.9
|
1.0
|
CHA
|
F:HEC1001
|
3.4
|
47.4
|
1.0
|
CHD
|
F:HEC1001
|
3.5
|
50.9
|
1.0
|
CE
|
F:MET185
|
3.5
|
52.0
|
1.0
|
HG3
|
F:MET185
|
3.6
|
53.6
|
1.0
|
CG
|
F:MET185
|
3.6
|
55.5
|
1.0
|
HE1
|
F:MET185
|
3.7
|
52.5
|
1.0
|
HE2
|
F:MET185
|
3.7
|
53.5
|
1.0
|
HB2
|
F:MET185
|
3.9
|
53.3
|
1.0
|
ND1
|
F:HIS40
|
4.1
|
51.2
|
1.0
|
CG
|
F:HIS40
|
4.1
|
45.2
|
1.0
|
C2A
|
F:HEC1001
|
4.3
|
46.9
|
1.0
|
C3A
|
F:HEC1001
|
4.3
|
49.3
|
1.0
|
C2B
|
F:HEC1001
|
4.3
|
50.7
|
1.0
|
C3B
|
F:HEC1001
|
4.3
|
43.7
|
1.0
|
C2C
|
F:HEC1001
|
4.3
|
52.1
|
1.0
|
C3C
|
F:HEC1001
|
4.3
|
48.6
|
1.0
|
C3D
|
F:HEC1001
|
4.3
|
52.1
|
1.0
|
HE3
|
F:MET185
|
4.3
|
53.0
|
1.0
|
HG2
|
F:MET185
|
4.3
|
53.6
|
1.0
|
C2D
|
F:HEC1001
|
4.3
|
56.4
|
1.0
|
CB
|
F:MET185
|
4.3
|
54.2
|
1.0
|
HHB
|
F:HEC1001
|
4.4
|
51.8
|
1.0
|
HHC
|
F:HEC1001
|
4.4
|
52.3
|
1.0
|
HHA
|
F:HEC1001
|
4.4
|
52.8
|
1.0
|
HHD
|
F:HEC1001
|
4.4
|
53.2
|
1.0
|
HD21
|
F:LEU100
|
4.7
|
51.5
|
1.0
|
HD2
|
F:PRO98
|
4.8
|
52.6
|
1.0
|
HG3
|
F:PRO188
|
4.8
|
50.9
|
1.0
|
HB3
|
F:MET185
|
4.8
|
54.3
|
1.0
|
HB1
|
F:ALA97
|
4.8
|
57.1
|
1.0
|
HD11
|
F:LEU100
|
4.9
|
50.8
|
1.0
|
|
Iron binding site 9 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 9 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe1001
b:96.1
occ:1.00
|
FE1
|
G:FES1001
|
0.0
|
96.1
|
1.0
|
S1
|
G:FES1001
|
2.2
|
73.5
|
1.0
|
S2
|
G:FES1001
|
2.2
|
65.7
|
1.0
|
SG
|
G:CYS129
|
2.3
|
69.9
|
1.0
|
SG
|
G:CYS149
|
2.3
|
64.0
|
1.0
|
FE2
|
G:FES1001
|
2.7
|
84.3
|
1.0
|
HB3
|
G:CYS129
|
2.8
|
54.3
|
1.0
|
CB
|
G:CYS129
|
3.0
|
43.9
|
1.0
|
HB3
|
G:HIS131
|
3.1
|
53.6
|
1.0
|
HB2
|
G:CYS129
|
3.1
|
55.6
|
1.0
|
HB3
|
G:CYS149
|
3.3
|
58.8
|
1.0
|
CB
|
G:CYS149
|
3.4
|
54.0
|
1.0
|
HB2
|
G:CYS151
|
3.5
|
63.0
|
1.0
|
HB2
|
G:CYS134
|
3.5
|
58.1
|
1.0
|
HB2
|
G:CYS149
|
3.6
|
60.1
|
1.0
|
HG
|
G:SER154
|
3.7
|
64.9
|
1.0
|
HB2
|
G:SER154
|
3.8
|
64.4
|
1.0
|
H
|
G:LEU132
|
3.9
|
55.3
|
1.0
|
H
|
G:CYS134
|
3.9
|
56.9
|
1.0
|
CB
|
G:HIS131
|
4.0
|
48.0
|
1.0
|
HB2
|
G:HIS131
|
4.0
|
52.3
|
1.0
|
OG
|
G:SER154
|
4.1
|
71.5
|
1.0
|
H
|
G:HIS152
|
4.2
|
59.8
|
1.0
|
H
|
G:HIS131
|
4.2
|
54.1
|
1.0
|
HB2
|
G:HIS152
|
4.3
|
59.5
|
1.0
|
CB
|
G:CYS134
|
4.4
|
59.0
|
1.0
|
CA
|
G:CYS129
|
4.4
|
50.5
|
1.0
|
CB
|
G:CYS151
|
4.4
|
59.4
|
1.0
|
ND1
|
G:HIS131
|
4.4
|
54.5
|
1.0
|
CB
|
G:SER154
|
4.5
|
65.5
|
1.0
|
H
|
G:CYS151
|
4.5
|
63.6
|
1.0
|
ND1
|
G:HIS152
|
4.5
|
68.3
|
1.0
|
H
|
G:GLY133
|
4.6
|
58.6
|
1.0
|
H
|
G:SER154
|
4.7
|
64.1
|
1.0
|
N
|
G:CYS134
|
4.7
|
45.0
|
1.0
|
CG
|
G:HIS131
|
4.7
|
49.0
|
1.0
|
N
|
G:LEU132
|
4.7
|
53.3
|
1.0
|
HB3
|
G:CYS151
|
4.7
|
62.3
|
1.0
|
HB2
|
G:ALA167
|
4.8
|
58.5
|
1.0
|
CA
|
G:CYS149
|
4.8
|
53.6
|
1.0
|
SG
|
G:CYS134
|
4.8
|
72.1
|
1.0
|
N
|
G:HIS152
|
4.8
|
52.8
|
1.0
|
HA
|
G:CYS129
|
4.8
|
55.8
|
1.0
|
C
|
G:CYS129
|
4.9
|
54.8
|
1.0
|
N
|
G:HIS131
|
4.9
|
53.5
|
1.0
|
H
|
G:GLY153
|
4.9
|
62.3
|
1.0
|
CA
|
G:HIS131
|
5.0
|
52.0
|
1.0
|
|
Iron binding site 10 out
of 10 in 7tlj
Go back to
Iron Binding Sites List in 7tlj
Iron binding site 10 out
of 10 in the Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Rhodobacter Sphaeroides Mitochondrial Respiratory Chain Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe1001
b:84.3
occ:1.00
|
FE2
|
G:FES1001
|
0.0
|
84.3
|
1.0
|
ND1
|
G:HIS131
|
2.1
|
54.5
|
1.0
|
ND1
|
G:HIS152
|
2.1
|
68.3
|
1.0
|
S2
|
G:FES1001
|
2.2
|
65.7
|
1.0
|
S1
|
G:FES1001
|
2.2
|
73.5
|
1.0
|
HB2
|
G:HIS152
|
2.5
|
59.5
|
1.0
|
HB3
|
G:HIS131
|
2.6
|
53.6
|
1.0
|
FE1
|
G:FES1001
|
2.7
|
96.1
|
1.0
|
CG
|
G:HIS131
|
3.0
|
49.0
|
1.0
|
CG
|
G:HIS152
|
3.0
|
58.5
|
1.0
|
CE1
|
G:HIS131
|
3.1
|
55.2
|
1.0
|
CE1
|
G:HIS152
|
3.2
|
59.5
|
1.0
|
CB
|
G:HIS131
|
3.2
|
48.0
|
1.0
|
CB
|
G:HIS152
|
3.2
|
57.4
|
1.0
|
HE1
|
G:HIS131
|
3.4
|
54.1
|
1.0
|
HE1
|
G:HIS152
|
3.4
|
58.2
|
1.0
|
HB2
|
G:HIS131
|
3.5
|
52.3
|
1.0
|
HB2
|
G:CYS151
|
3.7
|
63.0
|
1.0
|
H
|
G:LEU132
|
3.7
|
55.3
|
1.0
|
H
|
G:HIS152
|
3.8
|
59.8
|
1.0
|
HB3
|
G:HIS152
|
3.9
|
58.9
|
1.0
|
HB2
|
G:LEU132
|
3.9
|
55.5
|
1.0
|
N
|
G:HIS152
|
4.0
|
52.8
|
1.0
|
HB3
|
G:CYS151
|
4.0
|
62.3
|
1.0
|
HB2
|
G:PRO166
|
4.0
|
56.7
|
1.0
|
CD2
|
G:HIS131
|
4.1
|
47.9
|
1.0
|
NE2
|
G:HIS131
|
4.2
|
48.6
|
1.0
|
CD2
|
G:HIS152
|
4.2
|
58.6
|
1.0
|
N
|
G:LEU132
|
4.2
|
53.3
|
1.0
|
CA
|
G:HIS152
|
4.2
|
56.3
|
1.0
|
NE2
|
G:HIS152
|
4.3
|
61.0
|
1.0
|
SG
|
G:CYS129
|
4.3
|
69.9
|
1.0
|
HG
|
G:LEU132
|
4.3
|
55.0
|
1.0
|
HG2
|
G:PRO166
|
4.3
|
57.4
|
1.0
|
HG
|
G:SER154
|
4.3
|
64.9
|
1.0
|
CB
|
G:CYS151
|
4.3
|
59.4
|
1.0
|
HD11
|
G:LEU132
|
4.4
|
55.3
|
1.0
|
CA
|
G:HIS131
|
4.5
|
52.0
|
1.0
|
SG
|
G:CYS149
|
4.6
|
64.0
|
1.0
|
OG
|
G:SER154
|
4.6
|
71.5
|
1.0
|
CB
|
G:LEU132
|
4.6
|
59.9
|
1.0
|
C
|
G:CYS151
|
4.7
|
55.6
|
1.0
|
C
|
G:HIS131
|
4.8
|
53.4
|
1.0
|
HD12
|
G:LEU132
|
4.8
|
55.8
|
1.0
|
CG
|
G:LEU132
|
4.8
|
54.8
|
1.0
|
CB
|
G:PRO166
|
4.9
|
51.8
|
1.0
|
H
|
G:HIS131
|
4.9
|
54.1
|
1.0
|
HD2
|
G:PRO166
|
4.9
|
57.4
|
1.0
|
CD1
|
G:LEU132
|
4.9
|
58.8
|
1.0
|
HD2
|
G:HIS131
|
4.9
|
53.4
|
1.0
|
H
|
G:GLY153
|
4.9
|
62.3
|
1.0
|
HE2
|
G:HIS131
|
5.0
|
52.9
|
1.0
|
HA
|
G:HIS152
|
5.0
|
59.2
|
1.0
|
C
|
G:HIS152
|
5.0
|
58.9
|
1.0
|
HB3
|
G:CYS129
|
5.0
|
54.3
|
1.0
|
|
Reference:
D.Xia,
L.Esser,
F.Zhou.
Conformation Switch of Rieske Isp Subunit Is Revealed By the Crystal Structure of Bacterial Cytochrome BC1 in Complex with Azoxystrobin To Be Published.
Page generated: Fri Aug 9 01:58:43 2024
|