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Iron in PDB 7u8g: Cryo-Em Structure of the Core Human Nadph Oxidase NOX2

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of the Core Human Nadph Oxidase NOX2 (pdb code 7u8g). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cryo-Em Structure of the Core Human Nadph Oxidase NOX2, PDB code: 7u8g:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7u8g

Go back to Iron Binding Sites List in 7u8g
Iron binding site 1 out of 2 in the Cryo-Em Structure of the Core Human Nadph Oxidase NOX2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of the Core Human Nadph Oxidase NOX2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe606

b:28.2
occ:1.00
FE A:HEM606 0.0 28.2 1.0
NC A:HEM606 2.0 28.2 1.0
NE2 A:HIS101 2.0 28.1 1.0
NA A:HEM606 2.0 28.2 1.0
ND A:HEM606 2.1 28.2 1.0
NB A:HEM606 2.1 28.2 1.0
NE2 A:HIS209 2.5 25.7 1.0
HE1 A:HIS209 2.8 25.7 1.0
CE1 A:HIS101 3.0 28.1 1.0
CD2 A:HIS101 3.0 28.1 1.0
CE1 A:HIS209 3.0 25.7 1.0
C1C A:HEM606 3.0 28.2 1.0
C4C A:HEM606 3.1 28.2 1.0
C1B A:HEM606 3.1 28.2 1.0
C4B A:HEM606 3.1 28.2 1.0
C1A A:HEM606 3.1 28.2 1.0
C4A A:HEM606 3.1 28.2 1.0
C1D A:HEM606 3.1 28.2 1.0
C4D A:HEM606 3.1 28.2 1.0
HD2 A:HIS101 3.2 28.1 1.0
HE1 A:HIS101 3.2 28.1 1.0
CHC A:HEM606 3.4 28.2 1.0
CHD A:HEM606 3.4 28.2 1.0
CHB A:HEM606 3.4 28.2 1.0
CHA A:HEM606 3.4 28.2 1.0
CD2 A:HIS209 3.8 25.7 1.0
ND1 A:HIS101 4.1 28.1 1.0
CG A:HIS101 4.1 28.1 1.0
HD2 A:HIS209 4.2 25.7 1.0
C2B A:HEM606 4.3 28.2 1.0
C2C A:HEM606 4.3 28.2 1.0
C3B A:HEM606 4.3 28.2 1.0
C3C A:HEM606 4.3 28.2 1.0
C3A A:HEM606 4.3 28.2 1.0
C2A A:HEM606 4.3 28.2 1.0
C2D A:HEM606 4.3 28.2 1.0
C3D A:HEM606 4.3 28.2 1.0
ND1 A:HIS209 4.3 25.7 1.0
HHC A:HEM606 4.4 28.2 1.0
HHA A:HEM606 4.4 28.2 1.0
HHB A:HEM606 4.4 28.2 1.0
HHD A:HEM606 4.4 28.2 1.0
HD11 A:ILE67 4.6 26.9 1.0
HB1 A:ALA105 4.7 26.4 1.0
CG A:HIS209 4.7 25.7 1.0
HZ A:PHE205 4.8 28.6 1.0
HG21 A:ILE189 4.8 25.2 1.0
HG12 A:VAL71 4.9 31.5 1.0
HD1 A:HIS101 4.9 28.1 1.0
HD1 A:HIS209 5.0 25.7 1.0

Iron binding site 2 out of 2 in 7u8g

Go back to Iron Binding Sites List in 7u8g
Iron binding site 2 out of 2 in the Cryo-Em Structure of the Core Human Nadph Oxidase NOX2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of the Core Human Nadph Oxidase NOX2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe607

b:22.3
occ:1.00
FE A:HEM607 0.0 22.3 1.0
ND A:HEM607 2.0 22.3 1.0
NB A:HEM607 2.0 22.3 1.0
NC A:HEM607 2.0 22.3 1.0
NA A:HEM607 2.1 22.3 1.0
NE2 A:HIS115 2.1 21.9 1.0
HD2 A:HIS115 2.5 21.9 1.0
NE2 A:HIS222 2.6 21.2 1.0
CD2 A:HIS115 2.6 21.9 1.0
HD2 A:HIS222 3.0 21.2 1.0
C1C A:HEM607 3.1 22.3 1.0
C4B A:HEM607 3.1 22.3 1.0
C4D A:HEM607 3.1 22.3 1.0
C1D A:HEM607 3.1 22.3 1.0
C1B A:HEM607 3.1 22.3 1.0
C1A A:HEM607 3.1 22.3 1.0
C4A A:HEM607 3.1 22.3 1.0
C4C A:HEM607 3.1 22.3 1.0
CD2 A:HIS222 3.2 21.2 1.0
CE1 A:HIS115 3.3 21.9 1.0
CHC A:HEM607 3.4 22.3 1.0
CHA A:HEM607 3.4 22.3 1.0
CHD A:HEM607 3.4 22.3 1.0
CHB A:HEM607 3.4 22.3 1.0
CE1 A:HIS222 3.8 21.2 1.0
HE1 A:HIS115 3.8 21.9 1.0
CG A:HIS115 3.9 21.9 1.0
HD2 A:HIS119 3.9 22.3 1.0
HE1 A:HIS222 4.1 21.2 1.0
ND1 A:HIS115 4.2 21.9 1.0
C3B A:HEM607 4.3 22.3 1.0
C2C A:HEM607 4.3 22.3 1.0
C3D A:HEM607 4.3 22.3 1.0
C2D A:HEM607 4.3 22.3 1.0
C2B A:HEM607 4.3 22.3 1.0
C2A A:HEM607 4.3 22.3 1.0
C3A A:HEM607 4.3 22.3 1.0
C3C A:HEM607 4.3 22.3 1.0
HHD A:HEM607 4.4 22.3 1.0
HHC A:HEM607 4.4 22.3 1.0
HHA A:HEM607 4.4 22.3 1.0
HHB A:HEM607 4.4 22.3 1.0
CG A:HIS222 4.4 21.2 1.0
HD11 A:ILE182 4.6 22.0 1.0
CD2 A:HIS119 4.6 22.3 1.0
ND1 A:HIS222 4.7 21.2 1.0
HA3 A:GLY179 4.9 20.5 1.0
HA2 A:GLY179 4.9 20.5 1.0
NE2 A:HIS119 5.0 22.3 1.0
HD1 A:HIS115 5.0 21.9 1.0

Reference:

S.Noreng, N.Ota, Y.Sun, H.Ho, M.Johnson, C.P.Arthur, K.Schneider, I.Lehoux, C.W.Davies, K.Mortara, K.Wong, D.Seshasayee, M.Masureel, J.Payandeh, T.Yi, J.T.Koerber. Structure of the Core Human Nadph Oxidase NOX2. Nat Commun V. 13 6079 2022.
ISSN: ESSN 2041-1723
PubMed: 36241643
DOI: 10.1038/S41467-022-33711-0
Page generated: Fri Aug 9 02:44:00 2024

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