Iron in PDB 7ut8: Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Enzymatic activity of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
All present enzymatic activity of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction:
1.18.6.1;
Other elements in 7ut8:
The structure of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
36;
Binding sites:
The binding sites of Iron atom in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
(pdb code 7ut8). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 36 binding sites of Iron where determined in the
Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction, PDB code: 7ut8:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 36 in 7ut8
Go back to
Iron Binding Sites List in 7ut8
Iron binding site 1 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:33.4
occ:1.00
|
FE1
|
A:ICS502
|
0.0
|
33.4
|
1.0
|
S2A
|
A:ICS502
|
2.3
|
28.2
|
1.0
|
SG
|
A:CYS275
|
2.3
|
19.7
|
1.0
|
S4A
|
A:ICS502
|
2.3
|
11.6
|
1.0
|
S1A
|
A:ICS502
|
2.3
|
28.5
|
1.0
|
FE4
|
A:ICS502
|
2.7
|
29.2
|
1.0
|
FE3
|
A:ICS502
|
2.7
|
37.5
|
1.0
|
FE2
|
A:ICS502
|
2.7
|
24.3
|
1.0
|
CB
|
A:CYS275
|
3.4
|
20.2
|
1.0
|
CX
|
A:ICS502
|
3.5
|
35.3
|
1.0
|
OG
|
A:SER278
|
4.1
|
29.2
|
1.0
|
CB
|
A:LEU358
|
4.2
|
24.5
|
1.0
|
CB
|
A:SER278
|
4.4
|
20.9
|
1.0
|
CA
|
A:CYS275
|
4.6
|
18.4
|
1.0
|
CE2
|
A:TYR229
|
4.7
|
19.3
|
1.0
|
CD2
|
A:LEU358
|
4.7
|
25.7
|
1.0
|
S2B
|
A:ICS502
|
4.8
|
19.2
|
1.0
|
S5A
|
A:ICS502
|
4.8
|
15.7
|
1.0
|
S3A
|
A:ICS502
|
4.8
|
27.8
|
1.0
|
N
|
A:LEU358
|
4.9
|
30.0
|
1.0
|
FE6
|
A:ICS502
|
5.0
|
23.3
|
1.0
|
FE7
|
A:ICS502
|
5.0
|
24.4
|
1.0
|
|
Iron binding site 2 out
of 36 in 7ut8
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Iron Binding Sites List in 7ut8
Iron binding site 2 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:24.3
occ:1.00
|
FE2
|
A:ICS502
|
0.0
|
24.3
|
1.0
|
CX
|
A:ICS502
|
2.0
|
35.3
|
1.0
|
S2B
|
A:ICS502
|
2.2
|
19.2
|
1.0
|
S2A
|
A:ICS502
|
2.2
|
28.2
|
1.0
|
S1A
|
A:ICS502
|
2.3
|
28.5
|
1.0
|
FE6
|
A:ICS502
|
2.6
|
23.3
|
1.0
|
FE4
|
A:ICS502
|
2.7
|
29.2
|
1.0
|
FE1
|
A:ICS502
|
2.7
|
33.4
|
1.0
|
FE3
|
A:ICS502
|
2.7
|
37.5
|
1.0
|
FE5
|
A:ICS502
|
3.7
|
22.6
|
1.0
|
FE7
|
A:ICS502
|
3.7
|
24.4
|
1.0
|
S4A
|
A:ICS502
|
3.9
|
11.6
|
1.0
|
CE1
|
A:HIS195
|
4.0
|
14.5
|
1.0
|
NE2
|
A:HIS195
|
4.2
|
24.2
|
1.0
|
S3B
|
A:ICS502
|
4.2
|
23.3
|
1.0
|
S1B
|
A:ICS502
|
4.2
|
32.7
|
1.0
|
CZ
|
A:PHE381
|
4.3
|
28.1
|
1.0
|
S3A
|
A:ICS502
|
4.5
|
27.8
|
1.0
|
CE1
|
A:PHE381
|
4.5
|
27.4
|
1.0
|
S5A
|
A:ICS502
|
4.5
|
15.7
|
1.0
|
CG1
|
A:VAL70
|
4.7
|
24.4
|
1.0
|
SG
|
A:CYS275
|
4.7
|
19.7
|
1.0
|
CG2
|
A:VAL70
|
4.8
|
24.2
|
1.0
|
N
|
A:GLY357
|
5.0
|
22.3
|
1.0
|
|
Iron binding site 3 out
of 36 in 7ut8
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Iron Binding Sites List in 7ut8
Iron binding site 3 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:37.5
occ:1.00
|
FE3
|
A:ICS502
|
0.0
|
37.5
|
1.0
|
CX
|
A:ICS502
|
2.0
|
35.3
|
1.0
|
S5A
|
A:ICS502
|
2.2
|
15.7
|
1.0
|
S4A
|
A:ICS502
|
2.2
|
11.6
|
1.0
|
S2A
|
A:ICS502
|
2.3
|
28.2
|
1.0
|
FE7
|
A:ICS502
|
2.6
|
24.4
|
1.0
|
FE4
|
A:ICS502
|
2.6
|
29.2
|
1.0
|
FE1
|
A:ICS502
|
2.7
|
33.4
|
1.0
|
FE2
|
A:ICS502
|
2.7
|
24.3
|
1.0
|
FE6
|
A:ICS502
|
3.7
|
23.3
|
1.0
|
FE5
|
A:ICS502
|
3.7
|
22.6
|
1.0
|
S1A
|
A:ICS502
|
3.9
|
28.5
|
1.0
|
NH2
|
A:ARG96
|
3.9
|
26.8
|
1.0
|
S3B
|
A:ICS502
|
4.2
|
23.3
|
1.0
|
S4B
|
A:ICS502
|
4.2
|
27.5
|
1.0
|
CD2
|
A:TYR229
|
4.4
|
21.7
|
1.0
|
S2B
|
A:ICS502
|
4.5
|
19.2
|
1.0
|
S3A
|
A:ICS502
|
4.5
|
27.8
|
1.0
|
CE2
|
A:TYR229
|
4.6
|
19.3
|
1.0
|
SG
|
A:CYS275
|
4.8
|
19.7
|
1.0
|
NE
|
A:ARG359
|
5.0
|
25.0
|
1.0
|
|
Iron binding site 4 out
of 36 in 7ut8
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Iron Binding Sites List in 7ut8
Iron binding site 4 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:29.2
occ:1.00
|
FE4
|
A:ICS502
|
0.0
|
29.2
|
1.0
|
CX
|
A:ICS502
|
2.0
|
35.3
|
1.0
|
S3A
|
A:ICS502
|
2.2
|
27.8
|
1.0
|
S1A
|
A:ICS502
|
2.3
|
28.5
|
1.0
|
S4A
|
A:ICS502
|
2.3
|
11.6
|
1.0
|
FE5
|
A:ICS502
|
2.6
|
22.6
|
1.0
|
FE3
|
A:ICS502
|
2.6
|
37.5
|
1.0
|
FE2
|
A:ICS502
|
2.7
|
24.3
|
1.0
|
FE1
|
A:ICS502
|
2.7
|
33.4
|
1.0
|
FE7
|
A:ICS502
|
3.7
|
24.4
|
1.0
|
FE6
|
A:ICS502
|
3.7
|
23.3
|
1.0
|
S2A
|
A:ICS502
|
3.8
|
28.2
|
1.0
|
N
|
A:LEU358
|
3.9
|
30.0
|
1.0
|
CB
|
A:LEU358
|
4.1
|
24.5
|
1.0
|
N
|
A:GLY357
|
4.1
|
22.3
|
1.0
|
S4B
|
A:ICS502
|
4.3
|
27.5
|
1.0
|
S1B
|
A:ICS502
|
4.3
|
32.7
|
1.0
|
S5A
|
A:ICS502
|
4.5
|
15.7
|
1.0
|
N
|
A:ARG359
|
4.5
|
27.5
|
1.0
|
S2B
|
A:ICS502
|
4.5
|
19.2
|
1.0
|
CA
|
A:LEU358
|
4.5
|
26.2
|
1.0
|
SG
|
A:CYS275
|
4.7
|
19.7
|
1.0
|
CA
|
A:GLY357
|
4.7
|
25.2
|
1.0
|
C
|
A:GLY357
|
4.7
|
29.1
|
1.0
|
CG
|
A:ARG359
|
4.8
|
23.6
|
1.0
|
CD
|
A:ARG359
|
4.8
|
24.0
|
1.0
|
NE
|
A:ARG359
|
5.0
|
25.0
|
1.0
|
C
|
A:GLY356
|
5.0
|
29.0
|
1.0
|
|
Iron binding site 5 out
of 36 in 7ut8
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Iron Binding Sites List in 7ut8
Iron binding site 5 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:22.6
occ:1.00
|
FE5
|
A:ICS502
|
0.0
|
22.6
|
1.0
|
CX
|
A:ICS502
|
2.0
|
35.3
|
1.0
|
S4B
|
A:ICS502
|
2.2
|
27.5
|
1.0
|
S3A
|
A:ICS502
|
2.3
|
27.8
|
1.0
|
S1B
|
A:ICS502
|
2.3
|
32.7
|
1.0
|
FE4
|
A:ICS502
|
2.6
|
29.2
|
1.0
|
FE7
|
A:ICS502
|
2.6
|
24.4
|
1.0
|
FE6
|
A:ICS502
|
2.6
|
23.3
|
1.0
|
MO1
|
A:ICS502
|
2.7
|
20.0
|
1.0
|
FE2
|
A:ICS502
|
3.7
|
24.3
|
1.0
|
FE3
|
A:ICS502
|
3.7
|
37.5
|
1.0
|
S3B
|
A:ICS502
|
3.9
|
23.3
|
1.0
|
ND1
|
A:HIS442
|
4.0
|
19.7
|
1.0
|
S1A
|
A:ICS502
|
4.3
|
28.5
|
1.0
|
N
|
A:GLY356
|
4.3
|
30.6
|
1.0
|
CG2
|
A:ILE355
|
4.3
|
28.7
|
1.0
|
S4A
|
A:ICS502
|
4.3
|
11.6
|
1.0
|
CE1
|
A:HIS442
|
4.4
|
25.0
|
1.0
|
CA
|
A:GLY356
|
4.4
|
27.3
|
1.0
|
S2B
|
A:ICS502
|
4.5
|
19.2
|
1.0
|
S5A
|
A:ICS502
|
4.5
|
15.7
|
1.0
|
CD
|
A:ARG359
|
4.6
|
24.0
|
1.0
|
N
|
A:GLY357
|
4.7
|
22.3
|
1.0
|
CG
|
A:HIS442
|
4.9
|
16.5
|
1.0
|
NE
|
A:ARG359
|
4.9
|
25.0
|
1.0
|
NH1
|
A:ARG359
|
4.9
|
28.4
|
1.0
|
|
Iron binding site 6 out
of 36 in 7ut8
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Iron Binding Sites List in 7ut8
Iron binding site 6 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:23.3
occ:1.00
|
FE6
|
A:ICS502
|
0.0
|
23.3
|
1.0
|
CX
|
A:ICS502
|
2.0
|
35.3
|
1.0
|
S2B
|
A:ICS502
|
2.2
|
19.2
|
1.0
|
S3B
|
A:ICS502
|
2.2
|
23.3
|
1.0
|
S1B
|
A:ICS502
|
2.2
|
32.7
|
1.0
|
FE2
|
A:ICS502
|
2.6
|
24.3
|
1.0
|
FE7
|
A:ICS502
|
2.6
|
24.4
|
1.0
|
FE5
|
A:ICS502
|
2.6
|
22.6
|
1.0
|
MO1
|
A:ICS502
|
2.7
|
20.0
|
1.0
|
FE3
|
A:ICS502
|
3.7
|
37.5
|
1.0
|
FE4
|
A:ICS502
|
3.7
|
29.2
|
1.0
|
S4B
|
A:ICS502
|
3.8
|
27.5
|
1.0
|
O7
|
A:HCA501
|
4.1
|
28.9
|
1.0
|
CZ
|
A:PHE381
|
4.2
|
28.1
|
1.0
|
O1
|
A:HCA501
|
4.2
|
25.6
|
1.0
|
S2A
|
A:ICS502
|
4.2
|
28.2
|
1.0
|
S1A
|
A:ICS502
|
4.3
|
28.5
|
1.0
|
S5A
|
A:ICS502
|
4.5
|
15.7
|
1.0
|
CG2
|
A:VAL70
|
4.5
|
24.2
|
1.0
|
S3A
|
A:ICS502
|
4.5
|
27.8
|
1.0
|
O6
|
A:HCA501
|
4.9
|
22.4
|
1.0
|
ND1
|
A:HIS442
|
4.9
|
19.7
|
1.0
|
CE2
|
A:PHE381
|
4.9
|
28.8
|
1.0
|
FE1
|
A:ICS502
|
5.0
|
33.4
|
1.0
|
|
Iron binding site 7 out
of 36 in 7ut8
Go back to
Iron Binding Sites List in 7ut8
Iron binding site 7 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe502
b:24.4
occ:1.00
|
FE7
|
A:ICS502
|
0.0
|
24.4
|
1.0
|
CX
|
A:ICS502
|
2.0
|
35.3
|
1.0
|
S5A
|
A:ICS502
|
2.2
|
15.7
|
1.0
|
S4B
|
A:ICS502
|
2.2
|
27.5
|
1.0
|
S3B
|
A:ICS502
|
2.2
|
23.3
|
1.0
|
FE3
|
A:ICS502
|
2.6
|
37.5
|
1.0
|
FE6
|
A:ICS502
|
2.6
|
23.3
|
1.0
|
FE5
|
A:ICS502
|
2.6
|
22.6
|
1.0
|
MO1
|
A:ICS502
|
2.7
|
20.0
|
1.0
|
FE2
|
A:ICS502
|
3.7
|
24.3
|
1.0
|
FE4
|
A:ICS502
|
3.7
|
29.2
|
1.0
|
S1B
|
A:ICS502
|
3.8
|
32.7
|
1.0
|
NH2
|
A:ARG96
|
4.1
|
26.8
|
1.0
|
NE
|
A:ARG96
|
4.2
|
20.1
|
1.0
|
O6
|
A:HCA501
|
4.2
|
22.4
|
1.0
|
S2A
|
A:ICS502
|
4.3
|
28.2
|
1.0
|
S4A
|
A:ICS502
|
4.3
|
11.6
|
1.0
|
S2B
|
A:ICS502
|
4.4
|
19.2
|
1.0
|
S3A
|
A:ICS502
|
4.5
|
27.8
|
1.0
|
NH1
|
A:ARG359
|
4.5
|
28.4
|
1.0
|
CZ
|
A:ARG359
|
4.5
|
24.3
|
1.0
|
CZ
|
A:ARG96
|
4.7
|
16.2
|
1.0
|
NH2
|
A:ARG359
|
4.7
|
28.4
|
1.0
|
O7
|
A:HCA501
|
4.9
|
28.9
|
1.0
|
NE
|
A:ARG359
|
4.9
|
25.0
|
1.0
|
ND1
|
A:HIS442
|
5.0
|
19.7
|
1.0
|
FE1
|
A:ICS502
|
5.0
|
33.4
|
1.0
|
|
Iron binding site 8 out
of 36 in 7ut8
Go back to
Iron Binding Sites List in 7ut8
Iron binding site 8 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe601
b:41.0
occ:1.00
|
FE1
|
B:CLF601
|
0.0
|
41.0
|
1.0
|
SG
|
A:CYS154
|
2.2
|
10.3
|
1.0
|
S3A
|
B:CLF601
|
2.3
|
44.9
|
1.0
|
S2A
|
B:CLF601
|
2.3
|
21.7
|
1.0
|
S1
|
B:CLF601
|
2.4
|
34.8
|
1.0
|
FE2
|
B:CLF601
|
2.5
|
49.8
|
1.0
|
FE4
|
B:CLF601
|
2.7
|
62.1
|
1.0
|
FE3
|
B:CLF601
|
2.8
|
59.7
|
1.0
|
CB
|
A:CYS154
|
3.8
|
21.6
|
1.0
|
S4A
|
B:CLF601
|
3.8
|
40.5
|
1.0
|
CA
|
A:GLY185
|
4.0
|
22.4
|
1.0
|
SG
|
B:CYS95
|
4.1
|
8.8
|
1.0
|
N
|
A:GLY185
|
4.1
|
26.8
|
1.0
|
N
|
A:CYS154
|
4.2
|
18.7
|
1.0
|
FE8
|
B:CLF601
|
4.3
|
30.5
|
1.0
|
OG
|
B:SER92
|
4.5
|
27.2
|
1.0
|
CB
|
B:SER92
|
4.6
|
25.5
|
1.0
|
CA
|
A:CYS154
|
4.6
|
17.1
|
1.0
|
FE5
|
B:CLF601
|
4.7
|
51.2
|
1.0
|
SG
|
A:CYS62
|
4.8
|
20.0
|
1.0
|
FE6
|
B:CLF601
|
4.8
|
54.8
|
1.0
|
SG
|
A:CYS88
|
4.8
|
20.5
|
1.0
|
C
|
A:GLY185
|
4.9
|
20.0
|
1.0
|
|
Iron binding site 9 out
of 36 in 7ut8
Go back to
Iron Binding Sites List in 7ut8
Iron binding site 9 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe601
b:49.8
occ:1.00
|
FE2
|
B:CLF601
|
0.0
|
49.8
|
1.0
|
S4A
|
B:CLF601
|
2.3
|
40.5
|
1.0
|
SG
|
B:CYS95
|
2.3
|
8.8
|
1.0
|
S2A
|
B:CLF601
|
2.3
|
21.7
|
1.0
|
S1
|
B:CLF601
|
2.5
|
34.8
|
1.0
|
FE1
|
B:CLF601
|
2.5
|
41.0
|
1.0
|
FE4
|
B:CLF601
|
2.6
|
62.1
|
1.0
|
FE3
|
B:CLF601
|
2.7
|
59.7
|
1.0
|
FE8
|
B:CLF601
|
2.9
|
30.5
|
1.0
|
N
|
B:CYS95
|
3.3
|
14.3
|
1.0
|
CB
|
B:CYS95
|
3.5
|
17.2
|
1.0
|
CA
|
B:CYS95
|
3.6
|
11.1
|
1.0
|
S3A
|
B:CLF601
|
3.7
|
44.9
|
1.0
|
FE5
|
B:CLF601
|
3.9
|
51.2
|
1.0
|
S4B
|
B:CLF601
|
4.0
|
29.9
|
1.0
|
C
|
B:GLY94
|
4.0
|
11.9
|
1.0
|
CA
|
B:GLY94
|
4.5
|
18.7
|
1.0
|
SG
|
A:CYS154
|
4.6
|
10.3
|
1.0
|
FE6
|
B:CLF601
|
4.6
|
54.8
|
1.0
|
CB
|
B:SER92
|
4.6
|
25.5
|
1.0
|
O
|
B:GLY94
|
4.6
|
23.1
|
1.0
|
SG
|
A:CYS62
|
4.7
|
20.0
|
1.0
|
SG
|
A:CYS88
|
4.7
|
20.5
|
1.0
|
N
|
B:GLY94
|
5.0
|
17.3
|
1.0
|
|
Iron binding site 10 out
of 36 in 7ut8
Go back to
Iron Binding Sites List in 7ut8
Iron binding site 10 out
of 36 in the Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cryoem Structure of Azotobacter Vinelandii Nitrogenase Complex (1:1 Fep:Mofep, Atp-Bound) During Catalytic N2 Reduction within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe601
b:59.7
occ:1.00
|
FE3
|
B:CLF601
|
0.0
|
59.7
|
1.0
|
SG
|
A:CYS62
|
2.2
|
20.0
|
1.0
|
S4A
|
B:CLF601
|
2.3
|
40.5
|
1.0
|
S2A
|
B:CLF601
|
2.3
|
21.7
|
1.0
|
S3A
|
B:CLF601
|
2.3
|
44.9
|
1.0
|
FE2
|
B:CLF601
|
2.7
|
49.8
|
1.0
|
FE4
|
B:CLF601
|
2.7
|
62.1
|
1.0
|
FE1
|
B:CLF601
|
2.8
|
41.0
|
1.0
|
CB
|
A:CYS62
|
3.3
|
23.4
|
1.0
|
CB
|
A:TYR64
|
3.9
|
22.3
|
1.0
|
CA
|
A:GLY185
|
4.0
|
22.4
|
1.0
|
S1
|
B:CLF601
|
4.2
|
34.8
|
1.0
|
CA
|
B:GLY94
|
4.4
|
18.7
|
1.0
|
C
|
B:GLY94
|
4.6
|
11.9
|
1.0
|
N
|
A:GLY185
|
4.6
|
26.8
|
1.0
|
CG
|
A:TYR64
|
4.6
|
21.1
|
1.0
|
CD2
|
A:TYR64
|
4.7
|
24.1
|
1.0
|
N
|
B:CYS95
|
4.7
|
14.3
|
1.0
|
CA
|
A:CYS62
|
4.7
|
14.7
|
1.0
|
SG
|
A:CYS154
|
4.8
|
10.3
|
1.0
|
CE2
|
B:TYR98
|
4.8
|
19.2
|
1.0
|
N
|
A:TYR64
|
4.9
|
18.1
|
1.0
|
SG
|
B:CYS95
|
4.9
|
8.8
|
1.0
|
CA
|
A:TYR64
|
5.0
|
16.6
|
1.0
|
|
Reference:
H.L.Rutledge,
B.D.Cook,
H.P.M.Nguyen,
M.A.Herzik Jr.,
F.A.Tezcan.
Structures of the Nitrogenase Complex Prepared Under Catalytic Turnover Conditions. Science V. 377 865 2022.
ISSN: ESSN 1095-9203
PubMed: 35901182
DOI: 10.1126/SCIENCE.ABQ7641
Page generated: Fri Aug 9 03:04:21 2024
|