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Iron in PDB 7v3n: The Complex Structure of Sobcmb-D307A and Its Natural Precursor 2

Protein crystallography data

The structure of The Complex Structure of Sobcmb-D307A and Its Natural Precursor 2, PDB code: 7v3n was solved by L.Wu, J.H.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 80.94 / 1.85
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 114.46, 114.46, 55.57, 90, 90, 90
R / Rfree (%) 16.6 / 19.4

Iron Binding Sites:

The binding sites of Iron atom in the The Complex Structure of Sobcmb-D307A and Its Natural Precursor 2 (pdb code 7v3n). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Complex Structure of Sobcmb-D307A and Its Natural Precursor 2, PDB code: 7v3n:

Iron binding site 1 out of 1 in 7v3n

Go back to Iron Binding Sites List in 7v3n
Iron binding site 1 out of 1 in the The Complex Structure of Sobcmb-D307A and Its Natural Precursor 2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Complex Structure of Sobcmb-D307A and Its Natural Precursor 2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1401

b:19.2
occ:1.00
OD1 A:ASP200 2.1 17.3 1.0
O2 A:AKG1403 2.2 28.5 1.0
NE2 A:HIS256 2.2 19.1 1.0
NE2 A:HIS198 2.2 16.7 1.0
O5 A:AKG1403 2.3 24.4 1.0
O A:HOH1505 2.4 33.8 1.0
C1 A:AKG1403 2.9 25.6 1.0
C2 A:AKG1403 2.9 30.7 1.0
CG A:ASP200 3.0 21.9 1.0
CD2 A:HIS256 3.1 20.7 1.0
CE1 A:HIS198 3.2 18.9 1.0
CD2 A:HIS198 3.2 17.0 1.0
OD2 A:ASP200 3.2 20.6 1.0
CE1 A:HIS256 3.2 17.9 1.0
O1 A:AKG1403 4.1 26.9 1.0
ND1 A:HIS198 4.3 16.5 1.0
CG A:HIS256 4.3 16.8 1.0
ND1 A:HIS256 4.3 17.9 1.0
CG A:HIS198 4.3 15.1 1.0
C3 A:AKG1403 4.4 22.9 1.0
CB A:ASP200 4.4 17.2 1.0
C9 A:5UQ1402 4.5 20.4 1.0
OD1 A:ASN235 4.6 34.8 0.9
CE2 A:PHE271 4.6 21.6 1.0
N A:ASP200 4.7 15.0 1.0
CA A:ASP200 4.8 17.6 1.0
C4 A:AKG1403 4.9 23.0 1.0
CD2 A:LEU195 4.9 18.0 1.0
CZ A:PHE271 5.0 20.4 1.0

Reference:

L.Wu, J.H.Zhou. The Complex Structure of Sobcmb Mutant D307A and Its Substrate To Be Published.
Page generated: Thu Aug 7 07:25:30 2025

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