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Iron in PDB 7v3o: The Structure of Se-Sobcmb with Fe(II)and Akg

Protein crystallography data

The structure of The Structure of Se-Sobcmb with Fe(II)and Akg, PDB code: 7v3o was solved by L.Wu, J.H.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.00 / 1.83
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.62, 101.62, 130.57, 90, 90, 120
R / Rfree (%) 20 / 22.7

Other elements in 7v3o:

The structure of The Structure of Se-Sobcmb with Fe(II)and Akg also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the The Structure of Se-Sobcmb with Fe(II)and Akg (pdb code 7v3o). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Structure of Se-Sobcmb with Fe(II)and Akg, PDB code: 7v3o:

Iron binding site 1 out of 1 in 7v3o

Go back to Iron Binding Sites List in 7v3o
Iron binding site 1 out of 1 in the The Structure of Se-Sobcmb with Fe(II)and Akg


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Structure of Se-Sobcmb with Fe(II)and Akg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe403

b:32.8
occ:1.00
O5 A:AKG402 2.2 33.5 1.0
O1 A:AKG402 2.2 33.4 1.0
NE2 A:HIS256 2.2 34.1 1.0
NE2 A:HIS198 2.2 32.9 1.0
O A:HOH516 2.3 34.2 1.0
OD1 A:ASP200 2.3 33.8 1.0
C2 A:AKG402 2.8 36.6 1.0
C1 A:AKG402 2.9 37.2 1.0
CE1 A:HIS198 3.1 35.3 1.0
CE1 A:HIS256 3.2 38.2 1.0
CD2 A:HIS256 3.2 35.5 1.0
CG A:ASP200 3.2 36.0 1.0
CD2 A:HIS198 3.3 30.4 1.0
OD2 A:ASP200 3.3 35.6 1.0
O A:HOH562 3.9 46.2 1.0
O A:HOH591 3.9 40.3 1.0
O2 A:AKG402 4.1 38.1 1.0
ND1 A:HIS198 4.2 35.1 1.0
ND1 A:HIS256 4.2 34.8 1.0
CG A:HIS256 4.3 37.1 1.0
C3 A:AKG402 4.3 35.8 1.0
CG A:HIS198 4.4 36.6 1.0
CB A:ASP200 4.6 32.9 1.0
CE2 A:PHE271 4.7 35.1 1.0
C4 A:AKG402 4.8 34.3 1.0
CD2 A:LEU195 4.9 31.1 1.0
CA A:ASP200 4.9 31.0 1.0
N A:ASP200 4.9 32.7 1.0

Reference:

L.Wu, J.H.Zhou. The Apo Structure of Sobcmb with Fe(II) To Be Published.
Page generated: Fri Aug 9 04:53:58 2024

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