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Iron in PDB 7vxu: Matrix Arm of Deactive State Ci From Q10 Dataset

Other elements in 7vxu:

The structure of Matrix Arm of Deactive State Ci From Q10 Dataset also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Zinc (Zn) 1 atom

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 28;

Binding sites:

The binding sites of Iron atom in the Matrix Arm of Deactive State Ci From Q10 Dataset (pdb code 7vxu). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 28 binding sites of Iron where determined in the Matrix Arm of Deactive State Ci From Q10 Dataset, PDB code: 7vxu:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 28 in 7vxu

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Iron binding site 1 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:66.9
occ:1.00
 FE1 A:SF4501 0.0 66.9 1.0
SG A:CYS382 2.3 59.6 1.0
S2 A:SF4501 2.3 67.0 1.0
S4 A:SF4501 2.3 53.7 1.0
S3 A:SF4501 2.3 58.1 1.0
FE3 A:SF4501 2.7 69.1 1.0
FE4 A:SF4501 2.7 76.0 1.0
FE2 A:SF4501 2.7 62.3 1.0
CB A:CYS382 3.6 41.2 1.0
CB A:CYS385 3.7 45.2 1.0
S1 A:SF4501 3.9 63.3 1.0
N A:CYS382 4.0 36.5 1.0
N A:ILE424 4.3 44.7 1.0
CA A:CYS382 4.3 42.6 1.0
O A:CYS382 4.3 52.8 1.0
CB A:ILE424 4.4 35.2 1.0
SG A:CYS385 4.5 59.0 1.0
CG A:GLN381 4.5 40.7 1.0
CB A:THR423 4.6 42.2 1.0
CG1 A:ILE424 4.6 43.9 1.0
SG A:CYS379 4.7 63.6 1.0
C A:CYS382 4.8 40.3 1.0
SG A:CYS425 4.8 58.9 1.0
N A:CYS425 4.8 46.7 1.0
CA A:ILE424 4.9 45.2 1.0
N A:GLN381 4.9 40.8 1.0
CD1 A:ILE424 4.9 40.2 1.0
CA A:CYS385 5.0 48.2 1.0

Iron binding site 2 out of 28 in 7vxu

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Iron binding site 2 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:62.3
occ:1.00
 FE2 A:SF4501 0.0 62.3 1.0
SG A:CYS425 2.3 58.9 1.0
S4 A:SF4501 2.3 53.7 1.0
S3 A:SF4501 2.3 58.1 1.0
S1 A:SF4501 2.3 63.3 1.0
FE4 A:SF4501 2.7 76.0 1.0
FE3 A:SF4501 2.7 69.1 1.0
FE1 A:SF4501 2.7 66.9 1.0
CB A:CYS425 3.6 48.6 1.0
S2 A:SF4501 3.9 67.0 1.0
N A:CYS425 4.0 46.7 1.0
CB A:LEU427 4.0 48.9 1.0
CA A:CYS425 4.3 46.5 1.0
CG A:PRO223 4.3 48.1 1.0
CD1 A:ILE205 4.3 56.6 1.0
C A:CYS425 4.6 48.8 1.0
CD A:PRO223 4.7 47.4 1.0
SG A:CYS379 4.7 63.6 1.0
N A:LEU427 4.7 49.3 1.0
SG A:CYS385 4.8 59.0 1.0
O A:CYS425 4.8 57.5 1.0
CB A:CYS385 4.9 45.2 1.0
SG A:CYS382 4.9 59.6 1.0
CA A:LEU427 4.9 49.4 1.0

Iron binding site 3 out of 28 in 7vxu

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Iron binding site 3 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:69.1
occ:1.00
 FE3 A:SF4501 0.0 69.1 1.0
SG A:CYS385 2.3 59.0 1.0
S4 A:SF4501 2.3 53.7 1.0
S2 A:SF4501 2.3 67.0 1.0
S1 A:SF4501 2.3 63.3 1.0
FE1 A:SF4501 2.7 66.9 1.0
CB A:CYS385 2.7 45.2 1.0
FE2 A:SF4501 2.7 62.3 1.0
FE4 A:SF4501 2.7 76.0 1.0
S3 A:SF4501 3.9 58.1 1.0
CB A:SER378 4.1 43.5 1.0
CA A:CYS385 4.2 48.2 1.0
CD2 A:LEU427 4.3 47.1 1.0
SG A:CYS382 4.4 59.6 1.0
CB A:LEU427 4.4 48.9 1.0
N A:GLY380 4.6 43.8 1.0
N A:CYS379 4.6 50.0 1.0
C A:CYS385 4.7 51.9 1.0
SG A:CYS425 4.7 58.9 1.0
CA A:SER378 4.7 41.5 1.0
N A:ARG386 4.8 41.3 1.0
CG A:LEU427 4.8 49.8 1.0
SG A:CYS379 4.8 63.6 1.0
N A:GLY428 4.9 49.8 1.0
OG A:SER378 4.9 57.4 1.0

Iron binding site 4 out of 28 in 7vxu

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Iron binding site 4 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:76.0
occ:1.00
 FE4 A:SF4501 0.0 76.0 1.0
SG A:CYS379 2.3 63.6 1.0
S2 A:SF4501 2.3 67.0 1.0
S3 A:SF4501 2.3 58.1 1.0
S1 A:SF4501 2.3 63.3 1.0
FE2 A:SF4501 2.7 62.3 1.0
FE1 A:SF4501 2.7 66.9 1.0
FE3 A:SF4501 2.7 69.1 1.0
N A:GLY380 3.5 43.8 1.0
CB A:CYS379 3.5 47.8 1.0
N A:CYS379 3.8 50.0 1.0
S4 A:SF4501 3.9 53.7 1.0
N A:GLN381 4.0 40.8 1.0
CA A:CYS379 4.0 50.6 1.0
CG A:GLN381 4.1 40.7 1.0
C A:CYS379 4.2 55.8 1.0
CD A:PRO223 4.4 47.4 1.0
CA A:GLY380 4.5 41.6 1.0
C A:GLY380 4.7 45.4 1.0
SG A:CYS382 4.8 59.6 1.0
N A:CYS382 4.8 36.5 1.0
SG A:CYS425 4.8 58.9 1.0
C A:SER378 4.8 50.7 1.0
CB A:GLN381 4.8 42.9 1.0
CG A:PRO223 4.9 48.1 1.0
SG A:CYS385 4.9 59.0 1.0
CA A:GLN381 4.9 49.6 1.0
CD1 A:ILE205 4.9 56.6 1.0
NE2 A:GLN381 5.0 54.1 1.0

Iron binding site 5 out of 28 in 7vxu

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Iron binding site 5 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe301

b:62.9
occ:1.00
 FE1 B:SF4301 0.0 62.9 1.0
SG B:CYS113 2.3 53.4 1.0
S2 B:SF4301 2.3 51.9 1.0
S4 B:SF4301 2.3 51.0 1.0
S3 B:SF4301 2.3 47.7 1.0
FE3 B:SF4301 2.7 70.0 1.0
FE2 B:SF4301 2.7 70.1 1.0
FE4 B:SF4301 2.7 65.6 1.0
CB B:CYS113 3.4 39.9 1.0
CA B:CYS113 3.6 41.3 1.0
N B:ILE114 3.8 46.2 1.0
S1 B:SF4301 3.9 54.9 1.0
N B:ALA115 3.9 36.7 1.0
C B:CYS113 4.2 50.9 1.0
CB B:ALA166 4.3 35.9 1.0
CA B:ALA115 4.5 28.7 1.0
CE2 B:TYR145 4.5 41.5 1.0
N B:CYS116 4.6 41.0 1.0
C B:ILE114 4.8 48.6 1.0
SG B:CYS119 4.8 46.3 1.0
SG B:CYS162 4.9 49.8 1.0
CA B:ILE114 4.9 38.3 1.0
SG B:CYS116 4.9 52.1 1.0
N B:CYS113 4.9 44.0 1.0

Iron binding site 6 out of 28 in 7vxu

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Iron binding site 6 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe301

b:70.1
occ:1.00
 FE2 B:SF4301 0.0 70.1 1.0
SG B:CYS116 2.3 52.1 1.0
S1 B:SF4301 2.3 54.9 1.0
S3 B:SF4301 2.3 47.7 1.0
S4 B:SF4301 2.3 51.0 1.0
FE4 B:SF4301 2.7 65.6 1.0
FE3 B:SF4301 2.7 70.0 1.0
FE1 B:SF4301 2.7 62.9 1.0
CB B:CYS116 3.5 39.9 1.0
N B:CYS116 3.5 41.0 1.0
N B:LYS117 3.7 37.4 1.0
CA B:CYS116 3.9 39.8 1.0
S2 B:SF4301 3.9 51.9 1.0
C B:CYS116 4.1 45.8 1.0
N B:LEU118 4.2 42.5 1.0
CD B:PRO163 4.4 43.1 1.0
C B:ALA115 4.6 40.6 1.0
N B:ALA115 4.6 36.7 1.0
SG B:CYS162 4.6 49.8 1.0
CA B:LYS117 4.7 39.9 1.0
SG B:CYS119 4.7 46.3 1.0
CB B:LEU118 4.8 33.5 1.0
CA B:ALA115 4.8 28.7 1.0
CG1 B:ILE114 4.8 43.9 1.0
SG B:CYS113 4.8 53.4 1.0
N B:CYS119 4.8 34.3 1.0
C B:LYS117 4.9 46.6 1.0

Iron binding site 7 out of 28 in 7vxu

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Iron binding site 7 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe301

b:70.0
occ:1.00
 FE3 B:SF4301 0.0 70.0 1.0
SG B:CYS119 2.3 46.3 1.0
S1 B:SF4301 2.3 54.9 1.0
S2 B:SF4301 2.3 51.9 1.0
S4 B:SF4301 2.3 51.0 1.0
FE2 B:SF4301 2.7 70.1 1.0
FE1 B:SF4301 2.7 62.9 1.0
FE4 B:SF4301 2.7 65.6 1.0
CB B:CYS119 3.3 31.2 1.0
S3 B:SF4301 3.9 47.7 1.0
OH B:TYR145 3.9 47.0 1.0
N B:CYS119 4.0 34.3 1.0
CE2 B:TYR145 4.0 41.5 1.0
CA B:CYS119 4.3 36.7 1.0
CD1 B:ILE130 4.3 40.7 1.0
CG2 B:ILE167 4.4 37.0 1.0
CZ B:TYR145 4.5 44.5 1.0
SG B:CYS113 4.6 53.4 1.0
SG B:CYS116 4.7 52.1 1.0
N B:LEU118 4.7 42.5 1.0
SG B:CYS162 4.8 49.8 1.0
N B:LYS117 4.8 37.4 1.0

Iron binding site 8 out of 28 in 7vxu

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Iron binding site 8 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe301

b:65.6
occ:1.00
 FE4 B:SF4301 0.0 65.6 1.0
SG B:CYS162 2.3 49.8 1.0
S3 B:SF4301 2.3 47.7 1.0
S1 B:SF4301 2.3 54.9 1.0
S2 B:SF4301 2.3 51.9 1.0
FE2 B:SF4301 2.7 70.1 1.0
FE3 B:SF4301 2.7 70.0 1.0
FE1 B:SF4301 2.7 62.9 1.0
CB B:CYS162 3.4 28.7 1.0
CB B:ALA166 3.6 35.9 1.0
S4 B:SF4301 3.9 51.0 1.0
CA B:CYS162 4.0 29.4 1.0
CG2 B:ILE167 4.2 37.0 1.0
N B:ILE167 4.3 37.5 1.0
CD B:PRO163 4.4 43.1 1.0
CG2 B:VAL164 4.5 41.6 1.0
N B:ALA166 4.5 37.5 1.0
CA B:ALA166 4.6 28.2 1.0
SG B:CYS116 4.6 52.1 1.0
SG B:CYS119 4.8 46.3 1.0
SG B:CYS113 4.8 53.4 1.0
C B:CYS162 4.8 39.5 1.0
CB B:ILE167 4.9 32.4 1.0
N B:PRO163 4.9 48.1 1.0
C B:ALA166 4.9 31.1 1.0

Iron binding site 9 out of 28 in 7vxu

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Iron binding site 9 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe302

b:66.5
occ:1.00
 FE1 B:SF4302 0.0 66.5 1.0
SG B:CYS123 2.3 51.9 1.0
S3 B:SF4302 2.3 52.5 1.0
S4 B:SF4302 2.3 42.7 1.0
S2 B:SF4302 2.3 60.4 1.0
FE2 B:SF4302 2.7 52.8 1.0
FE4 B:SF4302 2.7 64.1 1.0
FE3 B:SF4302 2.7 64.3 1.0
CB B:CYS123 3.2 30.3 1.0
CA B:CYS123 3.7 28.9 1.0
S1 B:SF4302 3.9 39.1 1.0
CD B:PRO124 4.1 28.5 1.0
CD1 B:ILE128 4.4 33.5 1.0
C B:CYS123 4.4 38.9 1.0
CG1 B:ILE128 4.5 39.3 1.0
N B:PRO124 4.5 38.2 1.0
CB B:ALA127 4.6 35.8 1.0
SG B:CYS155 4.7 57.5 1.0
CB B:CYS158 4.8 36.8 1.0
SG B:CYS152 4.8 46.0 1.0
SG B:CYS158 4.8 51.2 1.0
N B:CYS123 4.9 41.5 1.0
N B:ALA127 5.0 30.9 1.0

Iron binding site 10 out of 28 in 7vxu

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Iron binding site 10 out of 28 in the Matrix Arm of Deactive State Ci From Q10 Dataset


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Matrix Arm of Deactive State Ci From Q10 Dataset within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe302

b:52.8
occ:1.00
 FE2 B:SF4302 0.0 52.8 1.0
SG B:CYS152 2.3 46.0 1.0
S3 B:SF4302 2.3 52.5 1.0
S1 B:SF4302 2.3 39.1 1.0
S4 B:SF4302 2.3 42.7 1.0
FE1 B:SF4302 2.7 66.5 1.0
FE3 B:SF4302 2.7 64.3 1.0
FE4 B:SF4302 2.7 64.1 1.0
CB B:CYS152 3.4 31.5 1.0
N B:TYR154 3.7 39.3 1.0
NE2 B:HIS101 3.7 49.5 1.0
N B:ILE153 3.9 37.3 1.0
CA B:CYS152 3.9 29.3 1.0
S2 B:SF4302 3.9 60.4 1.0
CE1 B:HIS101 4.0 46.0 1.0
CA B:TYR154 4.3 27.0 1.0
C B:CYS152 4.3 35.2 1.0
N B:CYS155 4.5 39.0 1.0
SG B:CYS123 4.7 51.9 1.0
C B:ILE153 4.7 39.3 1.0
SG B:CYS158 4.7 51.2 1.0
SG B:CYS155 4.8 57.5 1.0
CA B:ILE153 4.8 33.3 1.0
CD2 B:HIS101 4.9 50.9 1.0
C B:TYR154 5.0 40.2 1.0

Reference:

J.K.Gu, M.J.Yang. Matrix Arm of Deactive State Ci From Q10 Dataset To Be Published.
Page generated: Fri Aug 9 06:07:58 2024

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