Iron in PDB 7vy3: Structure of Photosynthetic LH1-Rc Super-Complex of Rhodobacter Sphaeroides Lacking Protein-U

The structure of Structure of Photosynthetic LH1-Rc Super-Complex of Rhodobacter Sphaeroides Lacking Protein-U also contains other interesting chemical elements:

Magnesium

(Mg)

25 atoms

The binding sites of Iron atom in the Structure of Photosynthetic LH1-Rc Super-Complex of Rhodobacter Sphaeroides Lacking Protein-U (pdb code 7vy3). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Photosynthetic LH1-Rc Super-Complex of Rhodobacter Sphaeroides Lacking Protein-U, PDB code: 7vy3:

Iron binding site 1 out of 1 in the Structure of Photosynthetic LH1-Rc Super-Complex of Rhodobacter Sphaeroides Lacking Protein-U


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Photosynthetic LH1-Rc Super-Complex of Rhodobacter Sphaeroides Lacking Protein-U within 5.0Å range: probe atom residue distance (Å) B Occ M:Fe404 b:19.4 occ:1.00 OE2 M:GLU234 2.0 18.4 1.0 OE1 M:GLU234 2.1 18.4 1.0 NE2 L:HIS190 2.1 12.0 1.0 NE2 M:HIS219 2.2 11.0 1.0 NE2 M:HIS266 2.3 12.4 1.0 CD M:GLU234 2.3 18.4 1.0 NE2 L:HIS230 2.3 12.5 1.0 CE1 L:HIS190 2.9 12.0 1.0 CE1 M:HIS266 3.1 12.4 1.0 CE1 M:HIS219 3.1 11.0 1.0 CD2 M:HIS219 3.2 11.0 1.0 CE1 L:HIS230 3.2 12.5 1.0 CD2 L:HIS190 3.3 12.0 1.0 CD2 L:HIS230 3.3 12.5 1.0 CD2 M:HIS266 3.3 12.4 1.0 CG M:GLU234 3.8 18.4 1.0 ND1 L:HIS190 4.1 12.0 1.0 ND1 M:HIS266 4.2 12.4 1.0 ND1 M:HIS219 4.3 11.0 1.0 CG L:HIS190 4.3 12.0 1.0 CG M:HIS219 4.3 11.0 1.0 ND1 L:HIS230 4.4 12.5 1.0 CG M:HIS266 4.4 12.4 1.0 CG L:HIS230 4.4 12.5 1.0 CG1 M:ILE223 4.5 11.6 1.0 CG2 L:VAL194 4.6 14.9 1.0 CB M:GLU234 4.7 18.4 1.0 CD1 M:ILE223 4.9 11.6 1.0

K.Tani, R.Kanno, R.Kikuchi, S.Kawamura, K.V.P.Nagashima, M.Hall, A.Takahashi, L.J.Yu, Y.Kimura, M.T.Madigan, A.Mizoguchi, B.M.Humbel, Z.Y.Wang-Otomo. Asymmetric Structure of the Native Rhodobacter Sphaeroides Dimeric LH1-Rc Complex. Nat Commun V. 13 1904 2022.
ISSN: ESSN 2041-1723
PubMed: 35393413
DOI: 10.1038/S41467-022-29453-8