Iron in PDB 7wyi: Native Photosystem I of Chlamydomonas Reinhardtii

All present enzymatic activity of Native Photosystem I of Chlamydomonas Reinhardtii:
1.97.1.12;

The structure of Native Photosystem I of Chlamydomonas Reinhardtii also contains other interesting chemical elements:

Magnesium

(Mg)

166 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Iron atom in the Native Photosystem I of Chlamydomonas Reinhardtii (pdb code 7wyi). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the Native Photosystem I of Chlamydomonas Reinhardtii, PDB code: 7wyi:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe803 b:140.3 occ:1.00 FE1 B:SF4803 0.0 140.3 1.0 S4 B:SF4803 2.3 140.3 1.0 S3 B:SF4803 2.3 140.3 1.0 S2 B:SF4803 2.3 140.3 1.0 FE4 B:SF4803 2.7 140.3 1.0 FE3 B:SF4803 2.7 140.3 1.0 FE2 B:SF4803 2.7 140.3 1.0 S1 B:SF4803 3.9 140.3 1.0 CB B:CYS569 4.1 142.1 1.0 CA B:CYS569 4.3 142.1 1.0 O B:THR568 4.5 143.5 1.0 N B:CYS569 4.8 142.1 1.0 CB A:CYS584 4.8 136.1 1.0 C B:THR568 4.9 143.5 1.0 CB B:CYS560 5.0 134.5 1.0

Iron binding site 2 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe803 b:140.3 occ:1.00 FE2 B:SF4803 0.0 140.3 1.0 S1 B:SF4803 2.3 140.3 1.0 S3 B:SF4803 2.3 140.3 1.0 S4 B:SF4803 2.3 140.3 1.0 FE3 B:SF4803 2.7 140.3 1.0 FE4 B:SF4803 2.7 140.3 1.0 FE1 B:SF4803 2.7 140.3 1.0 CB A:CYS584 3.7 136.1 1.0 S2 B:SF4803 3.9 140.3 1.0 CA A:CYS584 4.0 136.1 1.0 N A:CYS584 4.0 136.1 1.0 CB A:CYS575 4.2 127.8 1.0 C A:GLY577 4.7 136.9 1.0 N A:PRO578 4.8 129.8 1.0 CB B:CYS560 4.8 134.5 1.0 C A:THR583 4.9 135.9 1.0 O A:GLY577 4.9 136.9 1.0 N A:THR583 4.9 135.9 1.0

Iron binding site 3 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe803 b:140.3 occ:1.00 FE3 B:SF4803 0.0 140.3 1.0 S2 B:SF4803 2.3 140.3 1.0 S4 B:SF4803 2.3 140.3 1.0 S1 B:SF4803 2.3 140.3 1.0 FE4 B:SF4803 2.7 140.3 1.0 FE2 B:SF4803 2.7 140.3 1.0 FE1 B:SF4803 2.7 140.3 1.0 CB A:CYS575 3.8 127.8 1.0 CB B:PRO563 3.8 137.6 1.0 S3 B:SF4803 3.9 140.3 1.0 CA B:PRO563 4.1 137.6 1.0 N B:PRO563 4.1 137.6 1.0 C B:GLY562 4.5 138.8 1.0 CA A:GLY577 4.8 136.9 1.0 O B:GLY562 4.8 138.8 1.0 N A:GLY577 4.8 136.9 1.0 CB A:PRO574 4.9 128.3 1.0 CA A:CYS575 5.0 127.8 1.0 N A:CYS575 5.0 127.8 1.0

Iron binding site 4 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe803 b:140.3 occ:1.00 FE4 B:SF4803 0.0 140.3 1.0 S1 B:SF4803 2.3 140.3 1.0 S2 B:SF4803 2.3 140.3 1.0 S3 B:SF4803 2.3 140.3 1.0 FE3 B:SF4803 2.7 140.3 1.0 FE1 B:SF4803 2.7 140.3 1.0 FE2 B:SF4803 2.7 140.3 1.0 CB B:CYS560 2.8 134.5 1.0 O B:THR568 3.2 143.5 1.0 S4 B:SF4803 3.9 140.3 1.0 C B:THR568 4.2 143.5 1.0 CA B:CYS560 4.3 134.5 1.0 N B:GLY562 4.3 138.8 1.0 N B:ASP561 4.4 148.7 1.0 C B:GLY562 4.5 138.8 1.0 O B:GLY562 4.6 138.8 1.0 CA B:CYS569 4.6 142.1 1.0 CA B:GLY562 4.7 138.8 1.0 N B:CYS569 4.7 142.1 1.0 C B:CYS560 4.8 134.5 1.0 N B:PRO563 4.9 137.6 1.0

Iron binding site 5 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:149.2 occ:1.00 FE1 C:SF4101 0.0 149.2 1.0 S4 C:SF4101 2.3 149.2 1.0 S3 C:SF4101 2.3 149.2 1.0 S2 C:SF4101 2.3 149.2 1.0 FE2 C:SF4101 2.7 149.2 1.0 FE4 C:SF4101 2.7 149.2 1.0 FE3 C:SF4101 2.7 149.2 1.0 N C:CYS51 3.4 138.5 1.0 N C:LYS52 3.4 145.5 1.0 S1 C:SF4101 3.9 149.2 1.0 CB C:CYS51 3.9 138.5 1.0 CA C:CYS51 3.9 138.5 1.0 C C:CYS51 4.0 138.5 1.0 C C:GLY50 4.0 133.8 1.0 N C:GLY50 4.1 133.8 1.0 CA C:LYS52 4.3 145.5 1.0 CA C:GLY50 4.4 133.8 1.0 N C:ARG53 4.4 146.1 1.0 O C:GLY50 4.8 133.8 1.0 C C:LYS52 4.9 145.5 1.0 N C:VAL49 4.9 132.8 1.0 O C:CYS51 5.0 138.5 1.0

Iron binding site 6 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:149.2 occ:1.00 FE2 C:SF4101 0.0 149.2 1.0 S3 C:SF4101 2.3 149.2 1.0 S4 C:SF4101 2.3 149.2 1.0 S1 C:SF4101 2.3 149.2 1.0 FE4 C:SF4101 2.7 149.2 1.0 FE1 C:SF4101 2.7 149.2 1.0 FE3 C:SF4101 2.7 149.2 1.0 CB C:CYS21 3.0 175.0 1.0 CA C:CYS21 3.4 175.0 1.0 S2 C:SF4101 3.9 149.2 1.0 CB C:CYS54 4.0 165.3 1.0 N C:CYS21 4.4 175.0 1.0 C C:CYS21 4.4 175.0 1.0 N C:PRO22 4.6 157.8 1.0 N C:CYS54 4.7 165.3 1.0 CB C:VAL25 4.8 165.2 1.0

Iron binding site 7 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:149.2 occ:1.00 FE3 C:SF4101 0.0 149.2 1.0 S2 C:SF4101 2.3 149.2 1.0 S4 C:SF4101 2.3 149.2 1.0 S1 C:SF4101 2.3 149.2 1.0 FE4 C:SF4101 2.7 149.2 1.0 FE1 C:SF4101 2.7 149.2 1.0 FE2 C:SF4101 2.7 149.2 1.0 CB C:CYS54 3.1 165.3 1.0 N C:CYS54 3.5 165.3 1.0 CA C:LYS52 3.8 145.5 1.0 N C:LYS52 3.8 145.5 1.0 CA C:CYS54 3.9 165.3 1.0 S3 C:SF4101 3.9 149.2 1.0 C C:LYS52 4.1 145.5 1.0 N C:ARG53 4.1 146.1 1.0 N C:GLU55 4.3 167.4 1.0 C C:CYS54 4.6 165.3 1.0 C C:ARG53 4.6 146.1 1.0 O C:LYS52 4.9 145.5 1.0 CA C:ARG53 4.9 146.1 1.0 CB C:VAL67 5.0 167.6 1.0 C C:CYS51 5.0 138.5 1.0

Iron binding site 8 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:149.2 occ:1.00 FE4 C:SF4101 0.0 149.2 1.0 S1 C:SF4101 2.3 149.2 1.0 S3 C:SF4101 2.3 149.2 1.0 S2 C:SF4101 2.3 149.2 1.0 FE2 C:SF4101 2.7 149.2 1.0 FE3 C:SF4101 2.7 149.2 1.0 FE1 C:SF4101 2.7 149.2 1.0 CB C:CYS48 3.5 151.3 1.0 S4 C:SF4101 3.8 149.2 1.0 CA C:CYS48 4.3 151.3 1.0 CB C:VAL25 4.5 165.2 1.0 N C:GLY50 4.7 133.8 1.0

Iron binding site 9 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe102 b:182.2 occ:1.00 FE1 C:SF4102 0.0 182.2 1.0 S3 C:SF4102 2.3 182.2 1.0 S2 C:SF4102 2.3 182.2 1.0 S4 C:SF4102 2.3 182.2 1.0 FE4 C:SF4102 2.7 182.2 1.0 FE2 C:SF4102 2.7 182.2 1.0 FE3 C:SF4102 2.7 182.2 1.0 CB C:CYS58 2.8 168.8 1.0 CA C:CYS58 3.2 168.8 1.0 S1 C:SF4102 3.9 182.2 1.0 C C:CYS58 3.9 168.8 1.0 N C:PRO59 4.1 171.5 1.0 O C:SER64 4.2 179.0 1.0 N C:CYS58 4.3 168.8 1.0 CB C:SER64 4.6 179.0 1.0 O C:LEU63 4.6 185.2 1.0 O C:CYS58 4.7 168.8 1.0 N C:ILE12 4.9 165.3 1.0 N C:CYS17 4.9 168.5 1.0 N C:THR60 4.9 177.0 1.0 CB C:CYS17 5.0 168.5 1.0

Iron binding site 10 out of 12 in the Native Photosystem I of Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Native Photosystem I of Chlamydomonas Reinhardtii within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe102 b:182.2 occ:1.00 FE2 C:SF4102 0.0 182.2 1.0 S1 C:SF4102 2.3 182.2 1.0 S4 C:SF4102 2.3 182.2 1.0 S3 C:SF4102 2.3 182.2 1.0 FE1 C:SF4102 2.7 182.2 1.0 FE3 C:SF4102 2.7 182.2 1.0 FE4 C:SF4102 2.7 182.2 1.0 CB C:CYS17 2.9 168.5 1.0 N C:CYS17 3.6 168.5 1.0 CB C:ALA40 3.8 169.6 1.0 CA C:CYS17 3.8 168.5 1.0 S2 C:SF4102 3.9 182.2 1.0 CB C:CYS58 4.4 168.8 1.0 N C:THR15 4.5 167.0 1.0 N C:GLN16 4.5 163.8 1.0 C C:THR15 4.7 167.0 1.0 CA C:THR15 4.7 167.0 1.0 C C:GLN16 4.8 163.8 1.0 N C:VAL18 4.9 162.5 1.0 C C:CYS17 4.9 168.5 1.0 CA C:CYS58 5.0 168.8 1.0

G.Kurisu, C.Gerle, A.Kawamoto, K.Mitsuoka, H.Tanaka, Y.Misumi, J.Minagawa, H.Kubota-Kawai, R.Tokotsu, Y.Fujiyoshi, K.Abe. Structure of Photosystem I From Chlamydomonas Reinhardtii To Be Published.