Iron in PDB 7yho: Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution

All present enzymatic activity of Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution:
4.2.99.18;

The binding sites of Iron atom in the Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution (pdb code 7yho). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution, PDB code: 7yho:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:85.0 occ:1.00 FE1 A:SF41401 0.0 85.0 1.0 SG A:CYS1045 2.3 78.3 1.0 S3 A:SF41401 2.3 85.0 1.0 S2 A:SF41401 2.3 85.0 1.0 S4 A:SF41401 2.3 85.0 1.0 FE4 A:SF41401 2.7 85.0 1.0 FE3 A:SF41401 2.7 85.0 1.0 FE2 A:SF41401 2.7 85.0 1.0 CB A:CYS1045 3.0 78.3 1.0 CA A:CYS1045 3.3 78.3 1.0 CB A:PRO1043 3.9 74.7 1.0 S1 A:SF41401 3.9 85.0 1.0 N A:CYS1045 3.9 78.3 1.0 CB A:CYS1048 4.5 81.7 1.0 C A:CYS1045 4.6 78.3 1.0 CG A:PRO1043 4.6 74.7 1.0 C A:ASN1044 4.7 75.0 1.0 SG A:CYS1054 4.7 83.1 1.0 SG A:CYS1048 4.8 81.7 1.0 SG A:CYS1038 4.8 73.2 1.0 O A:CYS1045 4.8 78.3 1.0 C A:PRO1043 4.9 74.7 1.0 O A:PRO1043 5.0 74.7 1.0

Iron binding site 2 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:85.0 occ:1.00 FE2 A:SF41401 0.0 85.0 1.0 SG A:CYS1038 2.3 73.2 1.0 S3 A:SF41401 2.3 85.0 1.0 S1 A:SF41401 2.3 85.0 1.0 S4 A:SF41401 2.3 85.0 1.0 FE4 A:SF41401 2.7 85.0 1.0 FE1 A:SF41401 2.7 85.0 1.0 FE3 A:SF41401 2.7 85.0 1.0 CB A:CYS1038 3.0 73.2 1.0 CA A:CYS1038 3.7 73.2 1.0 S2 A:SF41401 3.9 85.0 1.0 CB A:PRO1043 4.3 74.7 1.0 CZ A:PHE1033 4.4 68.4 1.0 N A:CYS1038 4.5 73.2 1.0 SG A:CYS1054 4.7 83.1 1.0 SG A:CYS1045 4.7 78.3 1.0 SG A:CYS1048 4.8 81.7 1.0 C A:CYS1038 4.9 73.2 1.0 CE2 A:PHE1033 4.9 68.4 1.0 CG A:PRO1043 4.9 74.7 1.0

Iron binding site 3 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:85.0 occ:1.00 FE3 A:SF41401 0.0 85.0 1.0 SG A:CYS1048 2.3 81.7 1.0 S2 A:SF41401 2.3 85.0 1.0 S4 A:SF41401 2.3 85.0 1.0 S1 A:SF41401 2.3 85.0 1.0 FE1 A:SF41401 2.7 85.0 1.0 FE4 A:SF41401 2.7 85.0 1.0 FE2 A:SF41401 2.7 85.0 1.0 CB A:CYS1048 2.9 81.7 1.0 CZ A:PHE1033 3.9 68.4 1.0 S3 A:SF41401 3.9 85.0 1.0 CE1 A:PHE1033 4.3 68.4 1.0 CA A:CYS1048 4.4 81.7 1.0 CA A:CYS1045 4.6 78.3 1.0 C A:MET1050 4.8 86.3 1.0 N A:LYS1051 4.8 85.8 1.0 O A:MET1050 4.8 86.3 1.0 SG A:CYS1038 4.8 73.2 1.0 SG A:CYS1054 4.9 83.1 1.0 SG A:CYS1045 4.9 78.3 1.0 CE2 A:PHE1033 4.9 68.4 1.0 CB A:CYS1038 4.9 73.2 1.0 CB A:CYS1045 5.0 78.3 1.0 CA A:LYS1051 5.0 85.8 1.0

Iron binding site 4 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:85.0 occ:1.00 FE4 A:SF41401 0.0 85.0 1.0 SG A:CYS1054 2.3 83.1 1.0 S1 A:SF41401 2.3 85.0 1.0 S2 A:SF41401 2.3 85.0 1.0 S3 A:SF41401 2.3 85.0 1.0 FE1 A:SF41401 2.7 85.0 1.0 FE3 A:SF41401 2.7 85.0 1.0 FE2 A:SF41401 2.7 85.0 1.0 CB A:CYS1054 3.1 83.1 1.0 S4 A:SF41401 3.9 85.0 1.0 CA A:CYS1054 4.5 83.1 1.0 SG A:CYS1045 4.6 78.3 1.0 SG A:CYS1038 4.7 73.2 1.0 O A:MET1050 4.7 86.3 1.0 SG A:CYS1048 4.8 81.7 1.0 CD1 A:LEU981 4.8 79.1 1.0 CB A:HIS1056 4.8 84.0 1.0 N A:PHE1057 5.0 85.1 1.0

X.Du, J.Du. Cryoem Structure of Arabidopsis ROS1 in Complex with Tg Mismatch Dsdna at 3.3 Angstroms Resolution To Be Published.