Iron in PDB 7yhq: Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution

All present enzymatic activity of Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution:
4.2.99.18;

The binding sites of Iron atom in the Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution (pdb code 7yhq). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution, PDB code: 7yhq:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:70.3 occ:1.00 FE1 A:SF41401 0.0 70.3 1.0 S3 A:SF41401 2.3 70.3 1.0 S2 A:SF41401 2.3 70.3 1.0 S4 A:SF41401 2.3 70.3 1.0 CA A:CYS1045 2.4 76.3 1.0 SG A:CYS1045 2.4 76.3 1.0 CB A:CYS1045 2.6 76.3 1.0 FE3 A:SF41401 2.7 70.3 1.0 FE2 A:SF41401 2.7 70.3 1.0 FE4 A:SF41401 2.7 70.3 1.0 O A:CYS1045 3.0 76.3 1.0 C A:CYS1045 3.1 76.3 1.0 N A:CYS1045 3.5 76.3 1.0 CB A:CYS1048 3.5 71.0 1.0 S1 A:SF41401 3.9 70.3 1.0 O A:ASN1044 4.1 77.3 1.0 C A:ASN1044 4.2 77.3 1.0 N A:ASN1046 4.4 77.9 1.0 SG A:CYS1048 4.6 71.0 1.0 N A:CYS1048 4.6 71.0 1.0 CB A:PRO1043 4.6 73.5 1.0 CA A:CYS1048 4.7 71.0 1.0 SG A:CYS1054 4.7 77.5 1.0 SG A:CYS1038 4.9 69.8 1.0 CB A:CYS1054 5.0 77.5 1.0

Iron binding site 2 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:70.3 occ:1.00 FE2 A:SF41401 0.0 70.3 1.0 SG A:CYS1038 2.2 69.8 1.0 S4 A:SF41401 2.3 70.3 1.0 S1 A:SF41401 2.3 70.3 1.0 S3 A:SF41401 2.3 70.3 1.0 FE1 A:SF41401 2.7 70.3 1.0 FE3 A:SF41401 2.7 70.3 1.0 FE4 A:SF41401 2.7 70.3 1.0 CB A:CYS1038 3.6 69.8 1.0 O A:PHE1037 3.7 57.6 1.0 CA A:CYS1038 3.8 69.8 1.0 S2 A:SF41401 3.9 70.3 1.0 CB A:PRO1043 3.9 73.5 1.0 C A:PHE1037 4.1 57.6 1.0 N A:CYS1038 4.2 69.8 1.0 CA A:CYS1045 4.5 76.3 1.0 CB A:CYS1048 4.5 71.0 1.0 SG A:CYS1045 4.6 76.3 1.0 CG A:PRO1043 4.6 73.5 1.0 CB A:CYS1045 4.7 76.3 1.0 SG A:CYS1054 4.8 77.5 1.0 SG A:CYS1048 4.8 71.0 1.0 CZ A:PHE1033 4.8 62.2 1.0 CB A:PHE1037 4.9 57.6 1.0

Iron binding site 3 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:70.3 occ:1.00 FE3 A:SF41401 0.0 70.3 1.0 SG A:CYS1048 2.3 71.0 1.0 S1 A:SF41401 2.3 70.3 1.0 S4 A:SF41401 2.3 70.3 1.0 S2 A:SF41401 2.3 70.3 1.0 CB A:CYS1048 2.3 71.0 1.0 FE1 A:SF41401 2.7 70.3 1.0 FE2 A:SF41401 2.7 70.3 1.0 FE4 A:SF41401 2.7 70.3 1.0 CZ A:PHE1033 3.8 62.2 1.0 CA A:CYS1048 3.9 71.0 1.0 S3 A:SF41401 3.9 70.3 1.0 SG A:CYS1038 4.3 69.8 1.0 CE1 A:PHE1033 4.4 62.2 1.0 C A:CYS1048 4.5 71.0 1.0 CB A:CYS1054 4.5 77.5 1.0 N A:CYS1048 4.6 71.0 1.0 O A:CYS1045 4.7 76.3 1.0 SG A:CYS1045 4.8 76.3 1.0 SG A:CYS1054 4.8 77.5 1.0 CB A:MET1050 4.8 71.9 1.0 CD2 A:PHE1037 4.8 57.6 1.0 CA A:CYS1045 4.8 76.3 1.0 O A:CYS1048 4.8 71.0 1.0 CE2 A:PHE1033 4.9 62.2 1.0 C A:MET1050 4.9 71.9 1.0 N A:MET1050 4.9 71.9 1.0 CB A:PHE1037 5.0 57.6 1.0 N A:LYS1051 5.0 82.1 1.0

Iron binding site 4 out of 4 in the Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1401 b:70.3 occ:1.00 FE4 A:SF41401 0.0 70.3 1.0 SG A:CYS1054 2.3 77.5 1.0 S2 A:SF41401 2.3 70.3 1.0 S3 A:SF41401 2.3 70.3 1.0 S1 A:SF41401 2.3 70.3 1.0 FE1 A:SF41401 2.7 70.3 1.0 FE3 A:SF41401 2.7 70.3 1.0 FE2 A:SF41401 2.7 70.3 1.0 CB A:CYS1054 2.9 77.5 1.0 SG A:CYS1045 3.6 76.3 1.0 S4 A:SF41401 3.9 70.3 1.0 SG A:CYS1038 4.0 69.8 1.0 CA A:CYS1054 4.3 77.5 1.0 CB A:CYS1045 4.7 76.3 1.0 CB A:CYS1048 4.8 71.0 1.0 SG A:CYS1048 4.8 71.0 1.0 N A:PHE1057 5.0 87.8 1.0 CA A:CYS1045 5.0 76.3 1.0 CB A:PHE1057 5.0 87.8 1.0

X.Du, J.Du. Cryoem Structure of Arabidopsis ROS1 in Complex with A Covalent-Linked Reaction Intermediate at 3.9 Angstroms Resolution To Be Published.