Iron in PDB 7z84: Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Enzymatic activity of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
All present enzymatic activity of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State:
1.6.99.5;
Other elements in 7z84:
The structure of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
32;
Binding sites:
The binding sites of Iron atom in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
(pdb code 7z84). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 32 binding sites of Iron where determined in the
Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State, PDB code: 7z84:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 32 in 7z84
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Iron Binding Sites List in 7z84
Iron binding site 1 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe501
b:17.8
occ:1.00
|
FE1
|
F:SF4501
|
0.0
|
17.8
|
1.0
|
S4
|
F:SF4501
|
2.3
|
23.4
|
1.0
|
S3
|
F:SF4501
|
2.3
|
18.7
|
1.0
|
S2
|
F:SF4501
|
2.3
|
18.0
|
1.0
|
SG
|
F:CYS354
|
2.3
|
12.7
|
1.0
|
FE2
|
F:SF4501
|
2.6
|
20.9
|
1.0
|
FE3
|
F:SF4501
|
2.7
|
24.2
|
1.0
|
FE4
|
F:SF4501
|
2.8
|
19.2
|
1.0
|
CB
|
F:CYS354
|
3.4
|
13.3
|
1.0
|
N
|
F:CYS354
|
3.7
|
9.1
|
1.0
|
S1
|
F:SF4501
|
3.9
|
21.1
|
1.0
|
CA
|
F:CYS354
|
4.0
|
9.6
|
1.0
|
O
|
F:CYS354
|
4.1
|
15.4
|
1.0
|
CB
|
F:CYS357
|
4.1
|
18.0
|
1.0
|
N
|
F:PHE397
|
4.2
|
18.5
|
1.0
|
CB
|
F:PHE397
|
4.2
|
23.3
|
1.0
|
C
|
F:CYS354
|
4.4
|
11.1
|
1.0
|
SG
|
F:CYS357
|
4.5
|
22.2
|
1.0
|
N
|
F:CYS398
|
4.5
|
18.3
|
1.0
|
CB
|
F:THR396
|
4.6
|
32.3
|
1.0
|
CA
|
F:PHE397
|
4.7
|
23.4
|
1.0
|
CB
|
F:TRP353
|
4.8
|
14.6
|
1.0
|
C
|
F:TRP353
|
4.8
|
9.3
|
1.0
|
SG
|
F:CYS398
|
4.8
|
21.6
|
1.0
|
SG
|
F:CYS351
|
4.9
|
14.7
|
1.0
|
N
|
F:TRP353
|
4.9
|
10.7
|
1.0
|
|
Iron binding site 2 out
of 32 in 7z84
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Iron Binding Sites List in 7z84
Iron binding site 2 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe501
b:20.9
occ:1.00
|
FE2
|
F:SF4501
|
0.0
|
20.9
|
1.0
|
S4
|
F:SF4501
|
2.3
|
23.4
|
1.0
|
S3
|
F:SF4501
|
2.3
|
18.7
|
1.0
|
S1
|
F:SF4501
|
2.3
|
21.1
|
1.0
|
SG
|
F:CYS357
|
2.3
|
22.2
|
1.0
|
FE1
|
F:SF4501
|
2.6
|
17.8
|
1.0
|
FE4
|
F:SF4501
|
2.7
|
19.2
|
1.0
|
FE3
|
F:SF4501
|
2.7
|
24.2
|
1.0
|
CB
|
F:CYS357
|
3.0
|
18.0
|
1.0
|
OG
|
F:SER350
|
3.4
|
27.1
|
1.0
|
ND1
|
F:HIS400
|
3.6
|
39.1
|
1.0
|
S2
|
F:SF4501
|
3.9
|
18.0
|
1.0
|
CB
|
F:SER350
|
4.3
|
23.5
|
1.0
|
CG
|
F:HIS400
|
4.3
|
38.2
|
1.0
|
CE1
|
F:HIS400
|
4.4
|
35.3
|
1.0
|
N
|
F:CYS351
|
4.4
|
17.5
|
1.0
|
CB
|
F:HIS400
|
4.4
|
28.6
|
1.0
|
CA
|
F:CYS357
|
4.5
|
13.2
|
1.0
|
CA
|
F:SER350
|
4.6
|
19.9
|
1.0
|
SG
|
F:CYS354
|
4.6
|
12.7
|
1.0
|
SG
|
F:CYS398
|
4.9
|
21.6
|
1.0
|
SG
|
F:CYS351
|
4.9
|
14.7
|
1.0
|
N
|
F:ARG358
|
4.9
|
12.2
|
1.0
|
C
|
F:CYS357
|
5.0
|
10.3
|
1.0
|
|
Iron binding site 3 out
of 32 in 7z84
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Iron Binding Sites List in 7z84
Iron binding site 3 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe501
b:24.2
occ:1.00
|
FE3
|
F:SF4501
|
0.0
|
24.2
|
1.0
|
S4
|
F:SF4501
|
2.3
|
23.4
|
1.0
|
S2
|
F:SF4501
|
2.3
|
18.0
|
1.0
|
S1
|
F:SF4501
|
2.3
|
21.1
|
1.0
|
SG
|
F:CYS398
|
2.3
|
21.6
|
1.0
|
FE4
|
F:SF4501
|
2.6
|
19.2
|
1.0
|
FE2
|
F:SF4501
|
2.7
|
20.9
|
1.0
|
FE1
|
F:SF4501
|
2.7
|
17.8
|
1.0
|
CB
|
F:CYS398
|
3.4
|
15.8
|
1.0
|
CB
|
F:HIS400
|
3.9
|
28.6
|
1.0
|
S3
|
F:SF4501
|
3.9
|
18.7
|
1.0
|
N
|
F:CYS398
|
3.9
|
18.3
|
1.0
|
CA
|
F:CYS398
|
4.1
|
17.2
|
1.0
|
CG
|
F:PRO197
|
4.4
|
26.3
|
1.0
|
C
|
F:CYS398
|
4.4
|
26.4
|
1.0
|
N
|
F:HIS400
|
4.5
|
25.9
|
1.0
|
O
|
F:CYS398
|
4.6
|
32.8
|
1.0
|
CG
|
F:HIS400
|
4.6
|
38.2
|
1.0
|
CD1
|
F:ILE179
|
4.7
|
42.8
|
1.0
|
ND1
|
F:HIS400
|
4.7
|
39.1
|
1.0
|
SG
|
F:CYS351
|
4.7
|
14.7
|
1.0
|
CA
|
F:HIS400
|
4.8
|
26.6
|
1.0
|
SG
|
F:CYS354
|
4.8
|
12.7
|
1.0
|
SG
|
F:CYS357
|
4.9
|
22.2
|
1.0
|
C
|
F:PHE397
|
4.9
|
25.9
|
1.0
|
CD
|
F:PRO197
|
5.0
|
30.0
|
1.0
|
N
|
F:ALA399
|
5.0
|
23.9
|
1.0
|
|
Iron binding site 4 out
of 32 in 7z84
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Iron Binding Sites List in 7z84
Iron binding site 4 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe501
b:19.2
occ:1.00
|
FE4
|
F:SF4501
|
0.0
|
19.2
|
1.0
|
S3
|
F:SF4501
|
2.3
|
18.7
|
1.0
|
S2
|
F:SF4501
|
2.3
|
18.0
|
1.0
|
S1
|
F:SF4501
|
2.3
|
21.1
|
1.0
|
SG
|
F:CYS351
|
2.3
|
14.7
|
1.0
|
FE3
|
F:SF4501
|
2.6
|
24.2
|
1.0
|
FE2
|
F:SF4501
|
2.7
|
20.9
|
1.0
|
FE1
|
F:SF4501
|
2.8
|
17.8
|
1.0
|
CB
|
F:CYS351
|
3.4
|
16.1
|
1.0
|
N
|
F:CYS351
|
3.7
|
17.5
|
1.0
|
S4
|
F:SF4501
|
3.9
|
23.4
|
1.0
|
N
|
F:TRP353
|
3.9
|
10.7
|
1.0
|
CA
|
F:CYS351
|
4.0
|
12.0
|
1.0
|
CB
|
F:TRP353
|
4.0
|
14.6
|
1.0
|
N
|
F:GLY352
|
4.1
|
14.7
|
1.0
|
C
|
F:CYS351
|
4.2
|
16.7
|
1.0
|
OG
|
F:SER350
|
4.4
|
27.1
|
1.0
|
CD
|
F:PRO197
|
4.5
|
30.0
|
1.0
|
N
|
F:CYS354
|
4.5
|
9.1
|
1.0
|
CA
|
F:TRP353
|
4.5
|
7.5
|
1.0
|
CG
|
F:PRO197
|
4.7
|
26.3
|
1.0
|
SG
|
F:CYS398
|
4.7
|
21.6
|
1.0
|
SG
|
F:CYS357
|
4.9
|
22.2
|
1.0
|
C
|
F:SER350
|
4.9
|
27.2
|
1.0
|
C
|
F:GLY352
|
4.9
|
14.7
|
1.0
|
SG
|
F:CYS354
|
5.0
|
12.7
|
1.0
|
CG1
|
F:ILE179
|
5.0
|
34.6
|
1.0
|
|
Iron binding site 5 out
of 32 in 7z84
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Iron Binding Sites List in 7z84
Iron binding site 5 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe201
b:32.0
occ:1.00
|
FE1
|
E:FES201
|
0.0
|
32.0
|
1.0
|
S2
|
E:FES201
|
2.2
|
42.5
|
1.0
|
S1
|
E:FES201
|
2.2
|
34.3
|
1.0
|
SG
|
E:CYS92
|
2.3
|
36.0
|
1.0
|
SG
|
E:CYS97
|
2.3
|
34.4
|
1.0
|
FE2
|
E:FES201
|
2.7
|
39.1
|
1.0
|
CB
|
E:CYS97
|
3.5
|
39.2
|
1.0
|
CB
|
E:CYS92
|
3.5
|
31.7
|
1.0
|
ND2
|
E:ASN142
|
3.9
|
46.7
|
1.0
|
N
|
E:CYS97
|
4.1
|
30.1
|
1.0
|
CA
|
E:CYS133
|
4.2
|
30.4
|
1.0
|
N
|
E:LEU134
|
4.4
|
35.2
|
1.0
|
CA
|
E:CYS97
|
4.4
|
32.5
|
1.0
|
CB
|
E:CYS133
|
4.4
|
35.6
|
1.0
|
SG
|
E:CYS133
|
4.5
|
47.1
|
1.0
|
CB
|
E:SER94
|
4.5
|
36.1
|
1.0
|
SG
|
E:CYS137
|
4.7
|
40.6
|
1.0
|
N
|
E:SER94
|
4.8
|
25.9
|
1.0
|
C
|
E:CYS133
|
4.9
|
33.2
|
1.0
|
CA
|
E:CYS137
|
4.9
|
42.4
|
1.0
|
CA
|
E:CYS92
|
4.9
|
32.9
|
1.0
|
CG
|
E:ASN142
|
5.0
|
39.9
|
1.0
|
|
Iron binding site 6 out
of 32 in 7z84
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Iron Binding Sites List in 7z84
Iron binding site 6 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe201
b:39.1
occ:1.00
|
FE2
|
E:FES201
|
0.0
|
39.1
|
1.0
|
S2
|
E:FES201
|
2.2
|
42.5
|
1.0
|
S1
|
E:FES201
|
2.2
|
34.3
|
1.0
|
SG
|
E:CYS137
|
2.3
|
40.6
|
1.0
|
SG
|
E:CYS133
|
2.3
|
47.1
|
1.0
|
FE1
|
E:FES201
|
2.7
|
32.0
|
1.0
|
CB
|
E:CYS133
|
3.3
|
35.6
|
1.0
|
CB
|
E:CYS137
|
3.4
|
47.1
|
1.0
|
CA
|
E:CYS137
|
3.8
|
42.4
|
1.0
|
CA
|
E:CYS133
|
3.8
|
30.4
|
1.0
|
N
|
E:CYS137
|
3.9
|
40.9
|
1.0
|
N
|
E:LEU134
|
4.0
|
35.2
|
1.0
|
N
|
E:GLY135
|
4.0
|
30.2
|
1.0
|
N
|
E:ASN136
|
4.2
|
40.9
|
1.0
|
C
|
E:CYS133
|
4.2
|
33.2
|
1.0
|
N
|
F:GLY97
|
4.3
|
48.9
|
1.0
|
SG
|
E:CYS92
|
4.4
|
36.0
|
1.0
|
C
|
E:ASN136
|
4.4
|
40.6
|
1.0
|
CA
|
E:GLY135
|
4.6
|
35.4
|
1.0
|
SG
|
E:CYS97
|
4.7
|
34.4
|
1.0
|
CA
|
F:PRO96
|
4.8
|
46.4
|
1.0
|
C
|
E:GLY135
|
4.8
|
40.1
|
1.0
|
CB
|
E:VAL96
|
4.8
|
33.5
|
1.0
|
CG2
|
E:VAL96
|
4.8
|
36.1
|
1.0
|
ND2
|
E:ASN142
|
4.9
|
46.7
|
1.0
|
C
|
E:LEU134
|
4.9
|
32.6
|
1.0
|
CA
|
E:ASN136
|
5.0
|
37.3
|
1.0
|
O
|
E:ASN136
|
5.0
|
42.7
|
1.0
|
|
Iron binding site 7 out
of 32 in 7z84
Go back to
Iron Binding Sites List in 7z84
Iron binding site 7 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe1001
b:12.2
occ:1.00
|
FE1
|
G:SF41001
|
0.0
|
12.2
|
1.0
|
S3
|
G:SF41001
|
2.3
|
1.2
|
1.0
|
S2
|
G:SF41001
|
2.3
|
19.9
|
1.0
|
S4
|
G:SF41001
|
2.3
|
11.9
|
1.0
|
SG
|
G:CYS114
|
2.3
|
7.0
|
1.0
|
FE4
|
G:SF41001
|
2.7
|
12.2
|
1.0
|
FE3
|
G:SF41001
|
2.7
|
19.4
|
1.0
|
FE2
|
G:SF41001
|
2.7
|
7.1
|
1.0
|
CB
|
G:CYS114
|
3.3
|
7.5
|
1.0
|
S1
|
G:SF41001
|
3.9
|
4.2
|
1.0
|
CG
|
G:GLN117
|
4.2
|
2.8
|
1.0
|
NE2
|
G:HIS101
|
4.3
|
0.9
|
1.0
|
CB
|
G:LEU116
|
4.5
|
12.9
|
1.0
|
CD
|
G:GLN117
|
4.5
|
3.5
|
1.0
|
CB
|
G:GLU110
|
4.6
|
17.7
|
1.0
|
N
|
G:GLN117
|
4.6
|
6.0
|
1.0
|
CD2
|
G:LEU116
|
4.7
|
9.2
|
1.0
|
CA
|
G:CYS114
|
4.7
|
4.3
|
1.0
|
SG
|
G:CYS108
|
4.8
|
1.7
|
1.0
|
OE1
|
G:GLN117
|
4.8
|
4.6
|
1.0
|
CA
|
G:THR205
|
4.8
|
1.9
|
1.0
|
SG
|
G:CYS105
|
4.8
|
7.3
|
1.0
|
CG
|
G:GLU110
|
4.8
|
34.3
|
1.0
|
N
|
G:GLY206
|
4.9
|
6.6
|
1.0
|
CB
|
G:GLN117
|
4.9
|
8.1
|
1.0
|
CG
|
G:LEU116
|
4.9
|
12.3
|
1.0
|
|
Iron binding site 8 out
of 32 in 7z84
Go back to
Iron Binding Sites List in 7z84
Iron binding site 8 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe1001
b:7.1
occ:1.00
|
FE2
|
G:SF41001
|
0.0
|
7.1
|
1.0
|
S1
|
G:SF41001
|
2.3
|
4.2
|
1.0
|
S3
|
G:SF41001
|
2.3
|
1.2
|
1.0
|
S4
|
G:SF41001
|
2.3
|
11.9
|
1.0
|
SG
|
G:CYS105
|
2.3
|
7.3
|
1.0
|
FE4
|
G:SF41001
|
2.7
|
12.2
|
1.0
|
FE3
|
G:SF41001
|
2.7
|
19.4
|
1.0
|
FE1
|
G:SF41001
|
2.7
|
12.2
|
1.0
|
CB
|
G:CYS105
|
3.4
|
2.2
|
1.0
|
CA
|
G:CYS105
|
3.6
|
1.0
|
1.0
|
S2
|
G:SF41001
|
3.9
|
19.9
|
1.0
|
N
|
G:CYS105
|
3.9
|
4.3
|
1.0
|
NE2
|
G:HIS101
|
4.1
|
0.9
|
1.0
|
NE2
|
G:GLN117
|
4.1
|
3.6
|
1.0
|
CG
|
G:GLN117
|
4.4
|
2.8
|
1.0
|
CD
|
G:GLN117
|
4.4
|
3.5
|
1.0
|
CD2
|
G:HIS101
|
4.6
|
3.3
|
1.0
|
CG1
|
C:ILE516
|
4.6
|
9.5
|
1.0
|
CD1
|
C:ILE512
|
4.6
|
26.9
|
1.0
|
C
|
G:ASP104
|
4.7
|
5.7
|
1.0
|
CD1
|
C:ILE516
|
4.8
|
5.9
|
1.0
|
SG
|
G:CYS108
|
4.8
|
1.7
|
1.0
|
SG
|
G:CYS114
|
4.8
|
7.0
|
1.0
|
CB
|
G:CYS108
|
4.9
|
4.5
|
1.0
|
C
|
G:CYS105
|
5.0
|
4.7
|
1.0
|
|
Iron binding site 9 out
of 32 in 7z84
Go back to
Iron Binding Sites List in 7z84
Iron binding site 9 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe1001
b:19.4
occ:1.00
|
FE3
|
G:SF41001
|
0.0
|
19.4
|
1.0
|
NE2
|
G:HIS101
|
1.9
|
0.9
|
1.0
|
S2
|
G:SF41001
|
2.3
|
19.9
|
1.0
|
S1
|
G:SF41001
|
2.3
|
4.2
|
1.0
|
S4
|
G:SF41001
|
2.3
|
11.9
|
1.0
|
FE2
|
G:SF41001
|
2.7
|
7.1
|
1.0
|
FE1
|
G:SF41001
|
2.7
|
12.2
|
1.0
|
FE4
|
G:SF41001
|
2.7
|
12.2
|
1.0
|
CE1
|
G:HIS101
|
2.8
|
1.8
|
1.0
|
CD2
|
G:HIS101
|
3.1
|
3.3
|
1.0
|
S3
|
G:SF41001
|
3.9
|
1.2
|
1.0
|
ND1
|
G:HIS101
|
4.0
|
0.0
|
1.0
|
CG
|
G:ARG152
|
4.1
|
3.1
|
1.0
|
CG
|
G:HIS101
|
4.1
|
1.4
|
1.0
|
CB
|
G:ARG152
|
4.2
|
3.5
|
1.0
|
CD2
|
G:LEU116
|
4.3
|
9.2
|
1.0
|
CD
|
G:ARG152
|
4.5
|
5.3
|
1.0
|
SG
|
G:CYS105
|
4.8
|
7.3
|
1.0
|
SG
|
G:CYS114
|
4.8
|
7.0
|
1.0
|
SG
|
G:CYS108
|
4.8
|
1.7
|
1.0
|
O
|
G:ARG152
|
4.9
|
14.7
|
1.0
|
CA
|
G:ARG152
|
4.9
|
4.3
|
1.0
|
|
Iron binding site 10 out
of 32 in 7z84
Go back to
Iron Binding Sites List in 7z84
Iron binding site 10 out
of 32 in the Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Complex I From E. Coli, Ddm/Lmng-Purified, Under Turnover at pH 8, Open-Ready State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe1001
b:12.2
occ:1.00
|
FE4
|
G:SF41001
|
0.0
|
12.2
|
1.0
|
S2
|
G:SF41001
|
2.3
|
19.9
|
1.0
|
S1
|
G:SF41001
|
2.3
|
4.2
|
1.0
|
S3
|
G:SF41001
|
2.3
|
1.2
|
1.0
|
SG
|
G:CYS108
|
2.3
|
1.7
|
1.0
|
FE1
|
G:SF41001
|
2.7
|
12.2
|
1.0
|
FE2
|
G:SF41001
|
2.7
|
7.1
|
1.0
|
FE3
|
G:SF41001
|
2.7
|
19.4
|
1.0
|
CB
|
G:CYS108
|
3.2
|
4.5
|
1.0
|
S4
|
G:SF41001
|
3.9
|
11.9
|
1.0
|
CD
|
G:ARG152
|
4.1
|
5.3
|
1.0
|
CB
|
G:GLU110
|
4.2
|
17.7
|
1.0
|
NE
|
G:ARG152
|
4.4
|
2.1
|
1.0
|
N
|
G:GLY206
|
4.5
|
6.6
|
1.0
|
CG
|
G:ARG152
|
4.6
|
3.1
|
1.0
|
CA
|
G:CYS105
|
4.6
|
1.0
|
1.0
|
NE2
|
G:HIS101
|
4.6
|
0.9
|
1.0
|
CA
|
G:CYS108
|
4.7
|
5.4
|
1.0
|
CA
|
G:GLY206
|
4.7
|
6.2
|
1.0
|
N
|
G:GLY111
|
4.7
|
13.4
|
1.0
|
SG
|
G:CYS114
|
4.8
|
7.0
|
1.0
|
SG
|
G:CYS105
|
4.8
|
7.3
|
1.0
|
C
|
G:GLU110
|
4.9
|
7.9
|
1.0
|
N
|
G:CYS105
|
4.9
|
4.3
|
1.0
|
CA
|
G:GLU110
|
4.9
|
8.4
|
1.0
|
N
|
G:GLU110
|
4.9
|
9.1
|
1.0
|
CZ
|
G:ARG152
|
5.0
|
4.0
|
1.0
|
O
|
G:ASP104
|
5.0
|
16.7
|
1.0
|
|
Reference:
V.Kravchuk,
O.Petrova,
D.Kampjut,
A.Wojciechowska-Bason,
Z.Breese,
L.Sazanov.
A Universal Coupling Mechanism of Respiratory Complex I. Nature V. 609 808 2022.
ISSN: ESSN 1476-4687
PubMed: 36104567
DOI: 10.1038/S41586-022-05199-7
Page generated: Fri Aug 9 13:21:32 2024
|