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Iron in PDB 7z8d: Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV)

Protein crystallography data

The structure of Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV), PDB code: 7z8d was solved by A.G.Gabdulkhakov, G.K.Selikhanov, S.Guenther, T.Petrova, A.Meents, T.Y.Fufina, L.G.Vasilieva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.05 / 2.14
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 102.5, 102.5, 237.4, 90, 90, 90
R / Rfree (%) 17.9 / 21.3

Other elements in 7z8d:

The structure of Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV) also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV) (pdb code 7z8d). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV), PDB code: 7z8d:

Iron binding site 1 out of 1 in 7z8d

Go back to Iron Binding Sites List in 7z8d
Iron binding site 1 out of 1 in the Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV) within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Fe408

b:24.6
occ:1.00
OE2 M:GLU234 2.2 26.6 1.0
NE2 L:HIS190 2.2 23.3 1.0
NE2 M:HIS219 2.2 20.7 1.0
NE2 M:HIS266 2.2 22.3 1.0
NE2 L:HIS230 2.3 24.0 1.0
OE1 M:GLU234 2.5 22.4 1.0
CD M:GLU234 2.6 24.6 1.0
CE1 L:HIS190 3.0 16.6 1.0
CE1 M:HIS266 3.1 24.4 1.0
CE1 M:HIS219 3.2 20.1 1.0
CD2 M:HIS219 3.2 21.8 1.0
CE1 L:HIS230 3.2 22.3 1.0
CD2 L:HIS230 3.3 21.1 1.0
CD2 M:HIS266 3.3 19.0 1.0
CD2 L:HIS190 3.3 23.2 1.0
CG M:GLU234 4.1 20.0 1.0
ND1 L:HIS190 4.2 22.9 1.0
ND1 M:HIS266 4.3 24.4 1.0
ND1 M:HIS219 4.3 20.7 1.0
CG M:HIS219 4.3 26.2 1.0
ND1 L:HIS230 4.3 27.3 1.0
CG L:HIS190 4.4 25.5 1.0
CG M:HIS266 4.4 26.2 1.0
CG L:HIS230 4.4 21.5 1.0
CG1 M:ILE223 4.5 26.4 1.0
O M:HOH507 4.6 30.1 1.0
CG2 L:VAL194 4.8 27.3 1.0

Reference:

A.G.Gabdulkhakov, G.K.Selikhanov, S.Guenther, A.Meents, T.Y.Fufina, L.G.Vasilieva. Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv By Fixed-Target Serial Synchrotron Crystallography (Room Temperature, 26KEV) To Be Published.
Page generated: Fri Aug 9 13:51:58 2024

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