Iron in PDB 7zof: Streptavidin Iron-Porphyrin

Protein crystallography data

The structure of Streptavidin Iron-Porphyrin, PDB code: 7zof was solved by N.V.Igareta, T.R.Ward, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.76 / 1.74
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 115.251, 89.439, 57.167, 90, 97.54, 90
R / Rfree (%) 17 / 20.4

Iron Binding Sites:

The binding sites of Iron atom in the Streptavidin Iron-Porphyrin (pdb code 7zof). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Streptavidin Iron-Porphyrin, PDB code: 7zof:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7zof

Go back to Iron Binding Sites List in 7zof
Iron binding site 1 out of 2 in the Streptavidin Iron-Porphyrin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Streptavidin Iron-Porphyrin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe202

b:40.2
occ:0.80
N6 A:JLL201 2.0 54.3 1.0
N5 A:JLL201 2.0 55.6 1.0
N4 A:JLL201 2.1 42.1 1.0
N1 A:IMD202 2.1 45.1 1.0
N7 A:JLL201 2.1 56.1 1.0
N1 C:IMD201 2.1 69.2 1.0
C23 A:JLL201 3.0 56.9 1.0
C2 C:IMD201 3.0 69.4 1.0
C20 A:JLL201 3.0 59.6 1.0
C2 A:IMD202 3.0 40.4 1.0
C27 A:JLL201 3.1 64.6 1.0
C15 A:JLL201 3.1 45.4 1.0
C32 A:JLL201 3.1 61.7 1.0
C24 A:JLL201 3.1 57.9 1.0
C29 A:JLL201 3.1 57.7 1.0
C5 C:IMD201 3.1 71.2 1.0
C5 A:IMD202 3.1 43.5 1.0
C16 A:JLL201 3.2 47.0 1.0
C28 A:JLL201 3.4 58.1 1.0
C33 A:JLL201 3.4 64.1 1.0
C14 A:JLL201 3.5 52.6 1.0
C19 A:JLL201 3.5 50.5 1.0
N3 C:IMD201 4.2 75.1 1.0
N3 A:IMD202 4.2 46.5 1.0
C4 C:IMD201 4.2 70.7 1.0
C21 A:JLL201 4.2 67.1 1.0
C22 A:JLL201 4.2 65.8 1.0
C4 A:IMD202 4.2 44.1 1.0
C31 A:JLL201 4.3 62.3 1.0
C30 A:JLL201 4.3 59.6 1.0
C18 A:JLL201 4.3 47.6 1.0
C26 A:JLL201 4.3 59.1 1.0
C25 A:JLL201 4.3 59.1 1.0
C17 A:JLL201 4.3 42.9 1.0
C13 A:JLL201 5.0 55.3 1.0

Iron binding site 2 out of 2 in 7zof

Go back to Iron Binding Sites List in 7zof
Iron binding site 2 out of 2 in the Streptavidin Iron-Porphyrin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Streptavidin Iron-Porphyrin within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe202

b:36.8
occ:0.80
N4 B:JLL201 2.0 54.6 1.0
N7 B:JLL201 2.0 50.9 1.0
N1 D:IMD201 2.0 61.8 1.0
N5 B:JLL201 2.0 41.0 1.0
N6 B:JLL201 2.1 55.5 1.0
N1 B:IMD202 2.1 42.1 1.0
C29 B:JLL201 3.0 67.0 1.0
C2 D:IMD201 3.0 64.5 1.0
C27 B:JLL201 3.0 60.0 1.0
C2 B:IMD202 3.0 46.9 1.0
C20 B:JLL201 3.1 45.2 1.0
C5 D:IMD201 3.1 66.7 1.0
C23 B:JLL201 3.1 50.1 1.0
C16 B:JLL201 3.1 63.7 1.0
C32 B:JLL201 3.1 57.5 1.0
C5 B:IMD202 3.1 42.9 1.0
C15 B:JLL201 3.2 58.8 1.0
C24 B:JLL201 3.2 63.8 1.0
C28 B:JLL201 3.3 56.4 1.0
C19 B:JLL201 3.4 51.6 1.0
C33 B:JLL201 3.5 61.0 1.0
C14 B:JLL201 3.6 61.1 1.0
N3 D:IMD201 4.1 61.9 1.0
C17 B:JLL201 4.1 64.4 1.0
N3 B:IMD202 4.2 48.7 1.0
C4 D:IMD201 4.2 64.5 1.0
C30 B:JLL201 4.2 61.6 1.0
C18 B:JLL201 4.2 66.2 1.0
C4 B:IMD202 4.2 43.6 1.0
C31 B:JLL201 4.3 56.0 1.0
C26 B:JLL201 4.3 60.0 1.0
C21 B:JLL201 4.3 45.5 1.0
C22 B:JLL201 4.3 48.4 1.0
C25 B:JLL201 4.4 60.5 1.0

Reference:

N.V.Igareta, N.V.Igareta, T.R.Ward. N/A N/A.
Page generated: Wed Apr 5 07:34:22 2023

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