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Iron in PDB 7zps: Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex

Protein crystallography data

The structure of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex, PDB code: 7zps was solved by H.R.Adams, M.A.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.25 / 1.56
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 105.66, 105.66, 105.66, 90, 90, 90
R / Rfree (%) 18.1 / 20.2

Other elements in 7zps:

The structure of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex (pdb code 7zps). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex, PDB code: 7zps:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7zps

Go back to Iron Binding Sites List in 7zps
Iron binding site 1 out of 2 in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:24.7
occ:1.00
FE A:HEC201 0.0 24.7 1.0
N A:NO204 1.8 28.2 1.0
NA A:HEC201 2.0 23.1 1.0
NB A:HEC201 2.0 23.1 1.0
NC A:HEC201 2.0 24.3 1.0
ND A:HEC201 2.0 24.9 1.0
NE2 A:HIS123 2.2 25.4 1.0
O A:NO204 2.7 35.6 1.0
C4B A:HEC201 3.0 24.9 1.0
C1C A:HEC201 3.0 26.2 1.0
C4D A:HEC201 3.0 22.8 1.0
C1A A:HEC201 3.0 21.7 1.0
C1B A:HEC201 3.0 23.9 1.0
C4C A:HEC201 3.0 27.7 1.0
C1D A:HEC201 3.0 27.2 1.0
C4A A:HEC201 3.1 24.5 1.0
CE1 A:HIS123 3.1 26.2 1.0
CD2 A:HIS123 3.2 23.5 1.0
CHC A:HEC201 3.3 25.4 1.0
CHA A:HEC201 3.4 22.6 1.0
CHD A:HEC201 3.4 28.1 1.0
CHB A:HEC201 3.5 22.7 1.0
C2D A:HEC201 4.3 24.7 1.0
C3D A:HEC201 4.3 23.7 1.0
ND1 A:HIS123 4.3 26.2 1.0
C3B A:HEC201 4.3 26.7 1.0
C3C A:HEC201 4.3 28.9 1.0
C3A A:HEC201 4.3 21.3 1.0
C2C A:HEC201 4.3 28.1 1.0
C2A A:HEC201 4.3 20.8 1.0
C2B A:HEC201 4.3 24.4 1.0
CG A:HIS123 4.4 26.6 1.0
CZ A:PHE32 4.7 39.2 1.0
CE2 A:PHE32 4.9 36.5 1.0
CE1 A:PHE133 5.0 31.3 1.0

Iron binding site 2 out of 2 in 7zps

Go back to Iron Binding Sites List in 7zps
Iron binding site 2 out of 2 in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:26.6
occ:1.00
FE B:HEC201 0.0 26.6 1.0
N B:NO203 1.9 26.8 0.5
N B:NO203 2.0 30.6 0.5
NA B:HEC201 2.0 24.0 1.0
ND B:HEC201 2.0 25.1 1.0
NB B:HEC201 2.0 25.8 1.0
NC B:HEC201 2.1 27.3 1.0
NE2 B:HIS123 2.2 26.3 1.0
O B:NO203 2.9 31.1 0.5
C1A B:HEC201 3.0 23.4 1.0
C4D B:HEC201 3.0 24.9 1.0
C4A B:HEC201 3.0 24.5 1.0
C1B B:HEC201 3.0 25.9 1.0
C4C B:HEC201 3.0 27.1 1.0
C1D B:HEC201 3.1 26.7 1.0
O B:NO203 3.1 32.4 0.5
C1C B:HEC201 3.1 28.1 1.0
C4B B:HEC201 3.1 27.0 1.0
CE1 B:HIS123 3.1 27.0 1.0
CD2 B:HIS123 3.2 25.1 1.0
CHA B:HEC201 3.4 23.6 1.0
CHD B:HEC201 3.4 26.4 1.0
CHC B:HEC201 3.4 26.4 1.0
CHB B:HEC201 3.4 25.5 1.0
ND1 B:HIS123 4.3 26.3 1.0
C2A B:HEC201 4.3 22.7 1.0
C3D B:HEC201 4.3 24.2 1.0
C3A B:HEC201 4.3 23.7 1.0
C3B B:HEC201 4.3 29.3 1.0
C2D B:HEC201 4.3 26.0 1.0
C2C B:HEC201 4.3 29.3 1.0
CG B:HIS123 4.4 27.3 1.0
C3C B:HEC201 4.4 30.4 1.0
C2B B:HEC201 4.4 29.3 1.0
CZ B:PHE32 4.8 32.2 1.0
CE2 B:PHE32 5.0 34.8 1.0

Reference:

H.R.Adams, R.W.Strange, D.A.Svistunenko, C.R.Andrew, M.A.Hough. Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): No Complex To Be Published.
Page generated: Fri Aug 9 15:12:15 2024

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