Iron in PDB 8abe: Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
Enzymatic activity of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
All present enzymatic activity of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position:
7.1.1.8;
Iron Binding Sites:
The binding sites of Iron atom in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
(pdb code 8abe). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the
Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position, PDB code: 8abe:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Iron binding site 1 out
of 8 in 8abe
Go back to
Iron Binding Sites List in 8abe
Iron binding site 1 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:26.0
occ:1.00
|
FE
|
C:HEM501
|
0.0
|
26.0
|
1.0
|
|
ND
|
C:HEM501
|
1.9
|
26.1
|
1.0
|
|
NA
|
C:HEM501
|
2.0
|
26.9
|
1.0
|
|
NE2
|
C:HIS82
|
2.0
|
23.7
|
1.0
|
|
NC
|
C:HEM501
|
2.1
|
27.1
|
1.0
|
|
NE2
|
C:HIS183
|
2.1
|
23.7
|
1.0
|
|
NB
|
C:HEM501
|
2.1
|
27.0
|
1.0
|
|
C4D
|
C:HEM501
|
2.9
|
26.1
|
1.0
|
|
C1D
|
C:HEM501
|
2.9
|
25.7
|
1.0
|
|
C1A
|
C:HEM501
|
3.0
|
26.5
|
1.0
|
|
CE1
|
C:HIS82
|
3.0
|
22.7
|
1.0
|
|
CE1
|
C:HIS183
|
3.0
|
24.0
|
1.0
|
|
C4A
|
C:HEM501
|
3.0
|
27.4
|
1.0
|
|
C4B
|
C:HEM501
|
3.0
|
27.5
|
1.0
|
|
C1C
|
C:HEM501
|
3.1
|
28.0
|
1.0
|
|
C4C
|
C:HEM501
|
3.1
|
27.6
|
1.0
|
|
CD2
|
C:HIS82
|
3.1
|
23.2
|
1.0
|
|
C1B
|
C:HEM501
|
3.1
|
27.1
|
1.0
|
|
CD2
|
C:HIS183
|
3.1
|
23.2
|
1.0
|
|
CHA
|
C:HEM501
|
3.4
|
26.4
|
1.0
|
|
CHD
|
C:HEM501
|
3.4
|
26.8
|
1.0
|
|
CHC
|
C:HEM501
|
3.5
|
27.3
|
1.0
|
|
CHB
|
C:HEM501
|
3.5
|
26.8
|
1.0
|
|
ND1
|
C:HIS82
|
4.1
|
22.5
|
1.0
|
|
ND1
|
C:HIS183
|
4.1
|
23.7
|
1.0
|
|
C2A
|
C:HEM501
|
4.2
|
28.0
|
1.0
|
|
C3A
|
C:HEM501
|
4.2
|
27.9
|
1.0
|
|
C3D
|
C:HEM501
|
4.2
|
27.2
|
1.0
|
|
CG
|
C:HIS82
|
4.2
|
24.1
|
1.0
|
|
C2D
|
C:HEM501
|
4.2
|
26.7
|
1.0
|
|
CG
|
C:HIS183
|
4.2
|
24.4
|
1.0
|
|
C2C
|
C:HEM501
|
4.2
|
29.3
|
1.0
|
|
C3C
|
C:HEM501
|
4.3
|
29.5
|
1.0
|
|
C3B
|
C:HEM501
|
4.3
|
28.0
|
1.0
|
|
C2B
|
C:HEM501
|
4.3
|
28.1
|
1.0
|
|
CA
|
C:GLY131
|
4.8
|
31.5
|
1.0
|
|
NE2
|
C:GLN43
|
4.9
|
27.8
|
1.0
|
|
Iron binding site 2 out
of 8 in 8abe
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Iron Binding Sites List in 8abe
Iron binding site 2 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe502
b:24.7
occ:1.00
|
FE
|
C:HEM502
|
0.0
|
24.7
|
1.0
|
|
ND
|
C:HEM502
|
1.9
|
25.1
|
1.0
|
|
NA
|
C:HEM502
|
2.0
|
25.1
|
1.0
|
|
NC
|
C:HEM502
|
2.1
|
25.2
|
1.0
|
|
NB
|
C:HEM502
|
2.1
|
24.9
|
1.0
|
|
NE2
|
C:HIS197
|
2.1
|
26.3
|
1.0
|
|
NE2
|
C:HIS96
|
2.3
|
23.9
|
1.0
|
|
C4D
|
C:HEM502
|
2.9
|
25.4
|
1.0
|
|
C1D
|
C:HEM502
|
2.9
|
25.5
|
1.0
|
|
C4C
|
C:HEM502
|
3.0
|
26.2
|
1.0
|
|
C1A
|
C:HEM502
|
3.0
|
24.9
|
1.0
|
|
CE1
|
C:HIS197
|
3.0
|
26.2
|
1.0
|
|
C4A
|
C:HEM502
|
3.0
|
25.6
|
1.0
|
|
C1C
|
C:HEM502
|
3.1
|
25.0
|
1.0
|
|
C4B
|
C:HEM502
|
3.1
|
24.6
|
1.0
|
|
C1B
|
C:HEM502
|
3.1
|
25.1
|
1.0
|
|
CD2
|
C:HIS96
|
3.2
|
24.1
|
1.0
|
|
CD2
|
C:HIS197
|
3.2
|
26.6
|
1.0
|
|
CE1
|
C:HIS96
|
3.2
|
24.1
|
1.0
|
|
CHD
|
C:HEM502
|
3.4
|
26.5
|
1.0
|
|
CHA
|
C:HEM502
|
3.4
|
25.2
|
1.0
|
|
CHB
|
C:HEM502
|
3.5
|
24.9
|
1.0
|
|
CHC
|
C:HEM502
|
3.5
|
24.8
|
1.0
|
|
C3C
|
C:HEM502
|
4.2
|
25.8
|
1.0
|
|
C2D
|
C:HEM502
|
4.2
|
25.4
|
1.0
|
|
C3D
|
C:HEM502
|
4.2
|
26.9
|
1.0
|
|
ND1
|
C:HIS197
|
4.2
|
27.0
|
1.0
|
|
C2A
|
C:HEM502
|
4.2
|
26.4
|
1.0
|
|
C3A
|
C:HEM502
|
4.2
|
26.6
|
1.0
|
|
C2C
|
C:HEM502
|
4.2
|
25.6
|
1.0
|
|
CG
|
C:HIS197
|
4.3
|
27.3
|
1.0
|
|
CG
|
C:HIS96
|
4.3
|
25.7
|
1.0
|
|
ND1
|
C:HIS96
|
4.3
|
26.3
|
1.0
|
|
C3B
|
C:HEM502
|
4.4
|
25.5
|
1.0
|
|
C2B
|
C:HEM502
|
4.4
|
25.7
|
1.0
|
|
Iron binding site 3 out
of 8 in 8abe
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Iron Binding Sites List in 8abe
Iron binding site 3 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:86.1
occ:1.00
|
FE1
|
P:FES301
|
0.0
|
86.1
|
1.0
|
|
SG
|
P:CYS187
|
2.1
|
99.8
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
86.3
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
91.2
|
1.0
|
|
SG
|
P:CYS168
|
2.3
|
85.4
|
1.0
|
|
CB
|
P:CYS168
|
2.9
|
82.9
|
1.0
|
|
FE2
|
P:FES301
|
3.0
|
97.3
|
1.0
|
|
CB
|
P:CYS187
|
3.0
|
100.5
|
1.0
|
|
OG
|
P:SER192
|
3.7
|
95.0
|
1.0
|
|
CB
|
P:HIS170
|
3.9
|
94.8
|
1.0
|
|
CB
|
P:CYS173
|
4.3
|
91.7
|
1.0
|
|
CA
|
P:CYS168
|
4.4
|
82.5
|
1.0
|
|
CB
|
P:CYS189
|
4.4
|
103.2
|
1.0
|
|
CA
|
P:CYS187
|
4.5
|
103.0
|
1.0
|
|
ND1
|
P:HIS190
|
4.5
|
101.9
|
1.0
|
|
ND1
|
P:HIS170
|
4.5
|
97.1
|
1.0
|
|
N
|
P:LEU171
|
4.7
|
93.5
|
1.0
|
|
N
|
P:HIS170
|
4.7
|
91.3
|
1.0
|
|
CG
|
P:HIS170
|
4.7
|
95.7
|
1.0
|
|
C
|
P:CYS168
|
4.7
|
83.6
|
1.0
|
|
SG
|
P:CYS173
|
4.8
|
101.8
|
1.0
|
|
N
|
P:CYS173
|
4.8
|
84.4
|
1.0
|
|
CA
|
P:HIS170
|
4.8
|
93.3
|
1.0
|
|
CB
|
P:SER192
|
4.8
|
91.3
|
1.0
|
|
N
|
P:HIS190
|
4.9
|
98.2
|
1.0
|
|
C
|
P:CYS187
|
5.0
|
104.9
|
1.0
|
|
Iron binding site 4 out
of 8 in 8abe
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Iron Binding Sites List in 8abe
Iron binding site 4 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:97.3
occ:1.00
|
FE2
|
P:FES301
|
0.0
|
97.3
|
1.0
|
|
ND1
|
P:HIS170
|
2.1
|
97.1
|
1.0
|
|
ND1
|
P:HIS190
|
2.1
|
101.9
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
91.2
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
86.3
|
1.0
|
|
CG
|
P:HIS190
|
2.8
|
101.1
|
1.0
|
|
CG
|
P:HIS170
|
3.0
|
95.7
|
1.0
|
|
CB
|
P:HIS190
|
3.0
|
99.3
|
1.0
|
|
FE1
|
P:FES301
|
3.0
|
86.1
|
1.0
|
|
CE1
|
P:HIS170
|
3.1
|
96.8
|
1.0
|
|
CE1
|
P:HIS190
|
3.1
|
101.6
|
1.0
|
|
CB
|
P:HIS170
|
3.3
|
94.8
|
1.0
|
|
N
|
P:HIS190
|
3.8
|
98.2
|
1.0
|
|
CD2
|
P:HIS190
|
3.9
|
100.4
|
1.0
|
|
CA
|
P:HIS190
|
3.9
|
98.0
|
1.0
|
|
NE2
|
P:HIS190
|
4.1
|
101.2
|
1.0
|
|
CD2
|
P:HIS170
|
4.1
|
97.8
|
1.0
|
|
NE2
|
P:HIS170
|
4.2
|
98.3
|
1.0
|
|
CB
|
P:CYS189
|
4.2
|
103.2
|
1.0
|
|
SG
|
P:CYS187
|
4.3
|
99.8
|
1.0
|
|
N
|
P:LEU171
|
4.4
|
93.5
|
1.0
|
|
C
|
P:CYS189
|
4.5
|
99.6
|
1.0
|
|
CA
|
P:HIS170
|
4.6
|
93.3
|
1.0
|
|
CG
|
P:LEU171
|
4.6
|
94.0
|
1.0
|
|
CG
|
P:PRO204
|
4.6
|
100.3
|
1.0
|
|
SG
|
P:CYS168
|
4.6
|
85.4
|
1.0
|
|
CB
|
P:LEU171
|
4.7
|
93.9
|
1.0
|
|
C
|
P:HIS190
|
4.7
|
97.1
|
1.0
|
|
CB
|
P:PRO204
|
4.8
|
100.4
|
1.0
|
|
C
|
P:HIS170
|
4.9
|
93.9
|
1.0
|
|
CD1
|
P:LEU171
|
4.9
|
95.0
|
1.0
|
|
OG
|
P:SER192
|
4.9
|
95.0
|
1.0
|
|
CA
|
P:CYS189
|
5.0
|
103.3
|
1.0
|
|
Iron binding site 5 out
of 8 in 8abe
Go back to
Iron Binding Sites List in 8abe
Iron binding site 5 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe401
b:35.1
occ:1.00
|
FE
|
D:HEC401
|
0.0
|
35.1
|
1.0
|
|
NE2
|
D:HIS128
|
2.0
|
32.0
|
1.0
|
|
NC
|
D:HEC401
|
2.1
|
36.7
|
1.0
|
|
NB
|
D:HEC401
|
2.1
|
36.7
|
1.0
|
|
ND
|
D:HEC401
|
2.1
|
36.6
|
1.0
|
|
NA
|
D:HEC401
|
2.1
|
35.7
|
1.0
|
|
SD
|
D:MET248
|
2.3
|
38.8
|
1.0
|
|
CE1
|
D:HIS128
|
3.0
|
32.3
|
1.0
|
|
C4C
|
D:HEC401
|
3.0
|
37.5
|
1.0
|
|
C4B
|
D:HEC401
|
3.0
|
36.8
|
1.0
|
|
C4D
|
D:HEC401
|
3.0
|
36.1
|
1.0
|
|
C1C
|
D:HEC401
|
3.0
|
37.4
|
1.0
|
|
CD2
|
D:HIS128
|
3.1
|
32.5
|
1.0
|
|
C1B
|
D:HEC401
|
3.1
|
36.4
|
1.0
|
|
C1A
|
D:HEC401
|
3.1
|
36.0
|
1.0
|
|
C1D
|
D:HEC401
|
3.1
|
36.9
|
1.0
|
|
C4A
|
D:HEC401
|
3.1
|
35.2
|
1.0
|
|
CE
|
D:MET248
|
3.4
|
37.9
|
1.0
|
|
CHA
|
D:HEC401
|
3.4
|
35.2
|
1.0
|
|
CHC
|
D:HEC401
|
3.4
|
37.4
|
1.0
|
|
CHB
|
D:HEC401
|
3.4
|
34.9
|
1.0
|
|
CHD
|
D:HEC401
|
3.4
|
36.7
|
1.0
|
|
CG
|
D:MET248
|
3.4
|
38.8
|
1.0
|
|
CB
|
D:MET248
|
4.1
|
41.2
|
1.0
|
|
ND1
|
D:HIS128
|
4.1
|
32.9
|
1.0
|
|
CG
|
D:HIS128
|
4.2
|
33.8
|
1.0
|
|
C3C
|
D:HEC401
|
4.3
|
38.7
|
1.0
|
|
C3B
|
D:HEC401
|
4.3
|
37.9
|
1.0
|
|
C3D
|
D:HEC401
|
4.3
|
36.6
|
1.0
|
|
C2C
|
D:HEC401
|
4.3
|
38.1
|
1.0
|
|
C2D
|
D:HEC401
|
4.3
|
37.4
|
1.0
|
|
C2B
|
D:HEC401
|
4.4
|
37.0
|
1.0
|
|
C2A
|
D:HEC401
|
4.4
|
35.6
|
1.0
|
|
C3A
|
D:HEC401
|
4.4
|
36.0
|
1.0
|
|
Iron binding site 6 out
of 8 in 8abe
Go back to
Iron Binding Sites List in 8abe
Iron binding site 6 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe501
b:24.9
occ:1.00
|
FE
|
N:HEM501
|
0.0
|
24.9
|
1.0
|
|
ND
|
N:HEM501
|
1.9
|
25.8
|
1.0
|
|
NA
|
N:HEM501
|
2.0
|
25.5
|
1.0
|
|
NE2
|
N:HIS183
|
2.0
|
27.1
|
1.0
|
|
NC
|
N:HEM501
|
2.1
|
26.4
|
1.0
|
|
NE2
|
N:HIS82
|
2.1
|
22.7
|
1.0
|
|
NB
|
N:HEM501
|
2.1
|
26.4
|
1.0
|
|
C1D
|
N:HEM501
|
2.9
|
25.3
|
1.0
|
|
C4D
|
N:HEM501
|
2.9
|
26.1
|
1.0
|
|
C1A
|
N:HEM501
|
3.0
|
26.0
|
1.0
|
|
CE1
|
N:HIS183
|
3.0
|
26.6
|
1.0
|
|
C4A
|
N:HEM501
|
3.0
|
25.8
|
1.0
|
|
CE1
|
N:HIS82
|
3.0
|
22.3
|
1.0
|
|
C4B
|
N:HEM501
|
3.0
|
26.9
|
1.0
|
|
C4C
|
N:HEM501
|
3.0
|
25.8
|
1.0
|
|
CD2
|
N:HIS183
|
3.1
|
26.0
|
1.0
|
|
C1B
|
N:HEM501
|
3.1
|
26.9
|
1.0
|
|
C1C
|
N:HEM501
|
3.1
|
28.1
|
1.0
|
|
CD2
|
N:HIS82
|
3.1
|
22.4
|
1.0
|
|
CHD
|
N:HEM501
|
3.4
|
25.7
|
1.0
|
|
CHA
|
N:HEM501
|
3.4
|
25.6
|
1.0
|
|
CHB
|
N:HEM501
|
3.5
|
26.1
|
1.0
|
|
CHC
|
N:HEM501
|
3.5
|
26.7
|
1.0
|
|
ND1
|
N:HIS183
|
4.1
|
26.5
|
1.0
|
|
ND1
|
N:HIS82
|
4.1
|
22.8
|
1.0
|
|
C2A
|
N:HEM501
|
4.2
|
26.6
|
1.0
|
|
CG
|
N:HIS183
|
4.2
|
27.2
|
1.0
|
|
C2D
|
N:HEM501
|
4.2
|
26.9
|
1.0
|
|
C3A
|
N:HEM501
|
4.2
|
25.6
|
1.0
|
|
C3D
|
N:HEM501
|
4.2
|
27.8
|
1.0
|
|
CG
|
N:HIS82
|
4.2
|
23.4
|
1.0
|
|
C3C
|
N:HEM501
|
4.3
|
27.8
|
1.0
|
|
C2C
|
N:HEM501
|
4.3
|
28.6
|
1.0
|
|
C3B
|
N:HEM501
|
4.3
|
27.1
|
1.0
|
|
C2B
|
N:HEM501
|
4.3
|
27.7
|
1.0
|
|
CA
|
N:GLY131
|
4.8
|
29.9
|
1.0
|
|
NE2
|
N:GLN43
|
4.9
|
30.0
|
1.0
|
|
Iron binding site 7 out
of 8 in 8abe
Go back to
Iron Binding Sites List in 8abe
Iron binding site 7 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe502
b:25.1
occ:1.00
|
FE
|
N:HEM502
|
0.0
|
25.1
|
1.0
|
|
ND
|
N:HEM502
|
1.9
|
26.0
|
1.0
|
|
NA
|
N:HEM502
|
2.0
|
26.1
|
1.0
|
|
NC
|
N:HEM502
|
2.1
|
25.5
|
1.0
|
|
NE2
|
N:HIS96
|
2.1
|
25.6
|
1.0
|
|
NB
|
N:HEM502
|
2.1
|
25.6
|
1.0
|
|
NE2
|
N:HIS197
|
2.2
|
24.0
|
1.0
|
|
C4D
|
N:HEM502
|
2.9
|
26.1
|
1.0
|
|
CE1
|
N:HIS96
|
2.9
|
24.6
|
1.0
|
|
C1D
|
N:HEM502
|
2.9
|
26.2
|
1.0
|
|
C1A
|
N:HEM502
|
3.0
|
26.7
|
1.0
|
|
C4C
|
N:HEM502
|
3.0
|
26.7
|
1.0
|
|
C4A
|
N:HEM502
|
3.0
|
26.3
|
1.0
|
|
CE1
|
N:HIS197
|
3.0
|
23.3
|
1.0
|
|
C4B
|
N:HEM502
|
3.0
|
25.7
|
1.0
|
|
C1B
|
N:HEM502
|
3.0
|
26.1
|
1.0
|
|
C1C
|
N:HEM502
|
3.1
|
26.1
|
1.0
|
|
CD2
|
N:HIS96
|
3.1
|
26.0
|
1.0
|
|
CD2
|
N:HIS197
|
3.2
|
25.4
|
1.0
|
|
CHA
|
N:HEM502
|
3.4
|
26.7
|
1.0
|
|
CHB
|
N:HEM502
|
3.4
|
26.6
|
1.0
|
|
CHD
|
N:HEM502
|
3.4
|
26.5
|
1.0
|
|
CHC
|
N:HEM502
|
3.5
|
25.7
|
1.0
|
|
ND1
|
N:HIS96
|
4.1
|
26.2
|
1.0
|
|
C3C
|
N:HEM502
|
4.2
|
26.6
|
1.0
|
|
C2A
|
N:HEM502
|
4.2
|
28.4
|
1.0
|
|
C3D
|
N:HEM502
|
4.2
|
27.6
|
1.0
|
|
C3A
|
N:HEM502
|
4.2
|
27.5
|
1.0
|
|
ND1
|
N:HIS197
|
4.2
|
24.4
|
1.0
|
|
C2D
|
N:HEM502
|
4.2
|
27.0
|
1.0
|
|
CG
|
N:HIS96
|
4.2
|
26.8
|
1.0
|
|
C2C
|
N:HEM502
|
4.2
|
25.9
|
1.0
|
|
C3B
|
N:HEM502
|
4.3
|
25.7
|
1.0
|
|
C2B
|
N:HEM502
|
4.3
|
26.3
|
1.0
|
|
CG
|
N:HIS197
|
4.3
|
25.3
|
1.0
|
|
Iron binding site 8 out
of 8 in 8abe
Go back to
Iron Binding Sites List in 8abe
Iron binding site 8 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, B- Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe401
b:35.4
occ:1.00
|
FE
|
O:HEC401
|
0.0
|
35.4
|
1.0
|
|
NE2
|
O:HIS128
|
2.0
|
32.0
|
1.0
|
|
NB
|
O:HEC401
|
2.0
|
36.6
|
1.0
|
|
NC
|
O:HEC401
|
2.1
|
37.1
|
1.0
|
|
ND
|
O:HEC401
|
2.1
|
36.9
|
1.0
|
|
NA
|
O:HEC401
|
2.1
|
36.8
|
1.0
|
|
SD
|
O:MET248
|
2.2
|
36.7
|
1.0
|
|
CE1
|
O:HIS128
|
3.0
|
31.5
|
1.0
|
|
C4B
|
O:HEC401
|
3.0
|
36.1
|
1.0
|
|
C4C
|
O:HEC401
|
3.0
|
37.5
|
1.0
|
|
C1B
|
O:HEC401
|
3.0
|
36.0
|
1.0
|
|
C1C
|
O:HEC401
|
3.0
|
37.6
|
1.0
|
|
C1A
|
O:HEC401
|
3.0
|
36.6
|
1.0
|
|
C4D
|
O:HEC401
|
3.0
|
37.4
|
1.0
|
|
CD2
|
O:HIS128
|
3.1
|
30.3
|
1.0
|
|
C1D
|
O:HEC401
|
3.1
|
36.4
|
1.0
|
|
C4A
|
O:HEC401
|
3.1
|
36.4
|
1.0
|
|
CE
|
O:MET248
|
3.3
|
37.4
|
1.0
|
|
CHC
|
O:HEC401
|
3.4
|
35.8
|
1.0
|
|
CHA
|
O:HEC401
|
3.4
|
36.7
|
1.0
|
|
CHB
|
O:HEC401
|
3.4
|
35.2
|
1.0
|
|
CHD
|
O:HEC401
|
3.5
|
37.2
|
1.0
|
|
CG
|
O:MET248
|
3.5
|
37.1
|
1.0
|
|
CB
|
O:MET248
|
4.1
|
38.6
|
1.0
|
|
ND1
|
O:HIS128
|
4.1
|
31.6
|
1.0
|
|
CG
|
O:HIS128
|
4.2
|
32.6
|
1.0
|
|
C3B
|
O:HEC401
|
4.3
|
37.7
|
1.0
|
|
C3C
|
O:HEC401
|
4.3
|
38.2
|
1.0
|
|
C2C
|
O:HEC401
|
4.3
|
38.1
|
1.0
|
|
C2B
|
O:HEC401
|
4.3
|
37.2
|
1.0
|
|
C3D
|
O:HEC401
|
4.3
|
37.8
|
1.0
|
|
C2A
|
O:HEC401
|
4.3
|
36.6
|
1.0
|
|
C2D
|
O:HEC401
|
4.4
|
37.7
|
1.0
|
|
C3A
|
O:HEC401
|
4.4
|
35.8
|
1.0
|
|
Reference:
J.P.Wieferig,
W.Kuhlbrandt.
Analysis of the Conformational Heterogeneity of the Rieske Iron-Sulfur Protein in Complex III2 By Cryo-Em Iucrj 2023.
ISSN: ESSN 2052-2525
Page generated: Fri Aug 9 16:25:07 2024
|
