Iron in PDB 8abh: Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
Enzymatic activity of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
All present enzymatic activity of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position:
7.1.1.8;
Iron Binding Sites:
The binding sites of Iron atom in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
(pdb code 8abh). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the
Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position, PDB code: 8abh:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Iron binding site 1 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 1 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:33.2
occ:1.00
|
FE
|
C:HEM501
|
0.0
|
33.2
|
1.0
|
|
ND
|
C:HEM501
|
1.9
|
34.8
|
1.0
|
|
NA
|
C:HEM501
|
1.9
|
34.5
|
1.0
|
|
NE2
|
C:HIS183
|
2.0
|
35.7
|
1.0
|
|
NE2
|
C:HIS82
|
2.0
|
40.1
|
1.0
|
|
NB
|
C:HEM501
|
2.1
|
33.8
|
1.0
|
|
NC
|
C:HEM501
|
2.1
|
36.9
|
1.0
|
|
C4D
|
C:HEM501
|
2.9
|
35.3
|
1.0
|
|
C1D
|
C:HEM501
|
2.9
|
35.7
|
1.0
|
|
C1A
|
C:HEM501
|
2.9
|
34.1
|
1.0
|
|
CE1
|
C:HIS183
|
3.0
|
39.1
|
1.0
|
|
C4A
|
C:HEM501
|
3.0
|
37.1
|
1.0
|
|
C4B
|
C:HEM501
|
3.0
|
37.0
|
1.0
|
|
CE1
|
C:HIS82
|
3.0
|
41.6
|
1.0
|
|
C1C
|
C:HEM501
|
3.0
|
41.0
|
1.0
|
|
C1B
|
C:HEM501
|
3.0
|
35.1
|
1.0
|
|
C4C
|
C:HEM501
|
3.1
|
36.2
|
1.0
|
|
CD2
|
C:HIS82
|
3.1
|
41.5
|
1.0
|
|
CD2
|
C:HIS183
|
3.1
|
33.8
|
1.0
|
|
CHA
|
C:HEM501
|
3.3
|
33.6
|
1.0
|
|
CHD
|
C:HEM501
|
3.4
|
34.7
|
1.0
|
|
CHC
|
C:HEM501
|
3.4
|
39.2
|
1.0
|
|
CHB
|
C:HEM501
|
3.5
|
35.9
|
1.0
|
|
C3D
|
C:HEM501
|
4.1
|
36.7
|
1.0
|
|
ND1
|
C:HIS183
|
4.1
|
40.9
|
1.0
|
|
C3A
|
C:HEM501
|
4.1
|
35.4
|
1.0
|
|
ND1
|
C:HIS82
|
4.1
|
43.7
|
1.0
|
|
C2A
|
C:HEM501
|
4.1
|
36.9
|
1.0
|
|
C2D
|
C:HEM501
|
4.1
|
35.5
|
1.0
|
|
CG
|
C:HIS82
|
4.2
|
41.9
|
1.0
|
|
CG
|
C:HIS183
|
4.2
|
36.0
|
1.0
|
|
C2C
|
C:HEM501
|
4.2
|
44.4
|
1.0
|
|
C3B
|
C:HEM501
|
4.2
|
39.4
|
1.0
|
|
C3C
|
C:HEM501
|
4.3
|
44.7
|
1.0
|
|
C2B
|
C:HEM501
|
4.3
|
37.8
|
1.0
|
|
CA
|
C:GLY131
|
4.8
|
58.7
|
1.0
|
|
NE2
|
C:GLN43
|
4.9
|
56.1
|
1.0
|
|
Iron binding site 2 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 2 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe502
b:31.8
occ:1.00
|
FE
|
C:HEM502
|
0.0
|
31.8
|
1.0
|
|
ND
|
C:HEM502
|
1.9
|
36.8
|
1.0
|
|
NA
|
C:HEM502
|
2.0
|
33.6
|
1.0
|
|
NC
|
C:HEM502
|
2.0
|
35.1
|
1.0
|
|
NB
|
C:HEM502
|
2.1
|
32.2
|
1.0
|
|
NE2
|
C:HIS197
|
2.1
|
33.6
|
1.0
|
|
NE2
|
C:HIS96
|
2.2
|
42.3
|
1.0
|
|
C4D
|
C:HEM502
|
2.9
|
37.8
|
1.0
|
|
C1D
|
C:HEM502
|
2.9
|
36.6
|
1.0
|
|
C4C
|
C:HEM502
|
2.9
|
36.3
|
1.0
|
|
C1A
|
C:HEM502
|
2.9
|
36.9
|
1.0
|
|
C4A
|
C:HEM502
|
3.0
|
35.2
|
1.0
|
|
CE1
|
C:HIS197
|
3.0
|
37.3
|
1.0
|
|
C4B
|
C:HEM502
|
3.0
|
32.5
|
1.0
|
|
C1B
|
C:HEM502
|
3.0
|
33.5
|
1.0
|
|
C1C
|
C:HEM502
|
3.1
|
38.7
|
1.0
|
|
CD2
|
C:HIS96
|
3.1
|
40.7
|
1.0
|
|
CE1
|
C:HIS96
|
3.2
|
45.3
|
1.0
|
|
CD2
|
C:HIS197
|
3.2
|
35.0
|
1.0
|
|
CHA
|
C:HEM502
|
3.4
|
38.5
|
1.0
|
|
CHD
|
C:HEM502
|
3.4
|
35.6
|
1.0
|
|
CHB
|
C:HEM502
|
3.4
|
33.9
|
1.0
|
|
CHC
|
C:HEM502
|
3.5
|
36.7
|
1.0
|
|
C3C
|
C:HEM502
|
4.1
|
39.3
|
1.0
|
|
C2A
|
C:HEM502
|
4.1
|
39.2
|
1.0
|
|
C3A
|
C:HEM502
|
4.2
|
35.6
|
1.0
|
|
C3D
|
C:HEM502
|
4.2
|
38.8
|
1.0
|
|
C2C
|
C:HEM502
|
4.2
|
40.1
|
1.0
|
|
ND1
|
C:HIS197
|
4.2
|
38.2
|
1.0
|
|
C2D
|
C:HEM502
|
4.2
|
38.7
|
1.0
|
|
C2B
|
C:HEM502
|
4.3
|
31.6
|
1.0
|
|
CG
|
C:HIS96
|
4.3
|
39.8
|
1.0
|
|
C3B
|
C:HEM502
|
4.3
|
33.7
|
1.0
|
|
ND1
|
C:HIS96
|
4.3
|
45.7
|
1.0
|
|
CG
|
C:HIS197
|
4.3
|
38.9
|
1.0
|
|
Iron binding site 3 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 3 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:128.8
occ:1.00
|
FE1
|
P:FES301
|
0.0
|
128.8
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
117.6
|
1.0
|
|
SG
|
P:CYS187
|
2.2
|
117.9
|
1.0
|
|
SG
|
P:CYS168
|
2.2
|
152.1
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
137.8
|
1.0
|
|
CB
|
P:CYS168
|
2.9
|
146.9
|
1.0
|
|
FE2
|
P:FES301
|
3.0
|
140.0
|
1.0
|
|
CB
|
P:CYS187
|
3.2
|
113.7
|
1.0
|
|
OG
|
P:SER192
|
3.7
|
180.8
|
1.0
|
|
CB
|
P:HIS170
|
3.8
|
126.8
|
1.0
|
|
CB
|
P:CYS173
|
4.2
|
126.8
|
1.0
|
|
CA
|
P:CYS168
|
4.3
|
140.9
|
1.0
|
|
ND1
|
P:HIS170
|
4.5
|
139.7
|
1.0
|
|
ND1
|
P:HIS190
|
4.5
|
150.4
|
1.0
|
|
N
|
P:LEU171
|
4.6
|
126.2
|
1.0
|
|
N
|
P:HIS170
|
4.6
|
135.1
|
1.0
|
|
CA
|
P:CYS187
|
4.6
|
128.8
|
1.0
|
|
C
|
P:CYS168
|
4.6
|
133.7
|
1.0
|
|
CG
|
P:HIS170
|
4.6
|
137.2
|
1.0
|
|
CB
|
P:CYS189
|
4.6
|
172.1
|
1.0
|
|
SG
|
P:CYS173
|
4.7
|
162.3
|
1.0
|
|
CA
|
P:HIS170
|
4.7
|
133.6
|
1.0
|
|
N
|
P:CYS173
|
4.7
|
103.3
|
1.0
|
|
O
|
P:CYS168
|
4.9
|
127.4
|
1.0
|
|
CB
|
P:SER192
|
4.9
|
162.9
|
1.0
|
|
O
|
P:CYS173
|
4.9
|
108.4
|
1.0
|
|
CA
|
P:CYS173
|
5.0
|
102.5
|
1.0
|
|
N
|
P:HIS190
|
5.0
|
142.5
|
1.0
|
|
Iron binding site 4 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 4 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:140.0
occ:1.00
|
FE2
|
P:FES301
|
0.0
|
140.0
|
1.0
|
|
ND1
|
P:HIS170
|
2.0
|
139.7
|
1.0
|
|
ND1
|
P:HIS190
|
2.1
|
150.4
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
137.8
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
117.6
|
1.0
|
|
CG
|
P:HIS190
|
2.8
|
149.2
|
1.0
|
|
CG
|
P:HIS170
|
2.9
|
137.2
|
1.0
|
|
FE1
|
P:FES301
|
3.0
|
128.8
|
1.0
|
|
CB
|
P:HIS190
|
3.0
|
137.7
|
1.0
|
|
CE1
|
P:HIS170
|
3.0
|
147.6
|
1.0
|
|
CE1
|
P:HIS190
|
3.2
|
156.0
|
1.0
|
|
CB
|
P:HIS170
|
3.2
|
126.8
|
1.0
|
|
N
|
P:HIS190
|
3.9
|
142.5
|
1.0
|
|
CD2
|
P:HIS190
|
3.9
|
157.8
|
1.0
|
|
CA
|
P:HIS190
|
4.0
|
137.8
|
1.0
|
|
CD2
|
P:HIS170
|
4.1
|
149.1
|
1.0
|
|
NE2
|
P:HIS190
|
4.1
|
153.4
|
1.0
|
|
NE2
|
P:HIS170
|
4.1
|
152.8
|
1.0
|
|
SG
|
P:CYS187
|
4.2
|
117.9
|
1.0
|
|
N
|
P:LEU171
|
4.3
|
126.2
|
1.0
|
|
CB
|
P:CYS189
|
4.3
|
172.1
|
1.0
|
|
CG
|
P:PRO204
|
4.5
|
181.3
|
1.0
|
|
CA
|
P:HIS170
|
4.5
|
133.6
|
1.0
|
|
SG
|
P:CYS168
|
4.6
|
152.1
|
1.0
|
|
CG
|
P:LEU171
|
4.6
|
129.7
|
1.0
|
|
C
|
P:CYS189
|
4.7
|
151.9
|
1.0
|
|
CB
|
P:LEU171
|
4.7
|
126.5
|
1.0
|
|
CB
|
P:PRO204
|
4.7
|
181.7
|
1.0
|
|
C
|
P:HIS170
|
4.8
|
134.4
|
1.0
|
|
C
|
P:HIS190
|
4.8
|
135.2
|
1.0
|
|
CD1
|
P:LEU171
|
4.9
|
137.7
|
1.0
|
|
OG
|
P:SER192
|
5.0
|
180.8
|
1.0
|
|
Iron binding site 5 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 5 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe401
b:53.3
occ:1.00
|
FE
|
D:HEC401
|
0.0
|
53.3
|
1.0
|
|
NE2
|
D:HIS128
|
2.0
|
61.5
|
1.0
|
|
ND
|
D:HEC401
|
2.0
|
58.9
|
1.0
|
|
NB
|
D:HEC401
|
2.0
|
54.6
|
1.0
|
|
NA
|
D:HEC401
|
2.0
|
56.4
|
1.0
|
|
NC
|
D:HEC401
|
2.1
|
58.7
|
1.0
|
|
SD
|
D:MET248
|
2.2
|
60.0
|
1.0
|
|
CE1
|
D:HIS128
|
3.0
|
55.9
|
1.0
|
|
C4B
|
D:HEC401
|
3.0
|
54.9
|
1.0
|
|
C4C
|
D:HEC401
|
3.0
|
64.1
|
1.0
|
|
C1D
|
D:HEC401
|
3.0
|
63.9
|
1.0
|
|
C4D
|
D:HEC401
|
3.0
|
59.7
|
1.0
|
|
C1A
|
D:HEC401
|
3.0
|
59.9
|
1.0
|
|
CD2
|
D:HIS128
|
3.0
|
67.0
|
1.0
|
|
C1B
|
D:HEC401
|
3.0
|
55.3
|
1.0
|
|
C4A
|
D:HEC401
|
3.0
|
56.7
|
1.0
|
|
C1C
|
D:HEC401
|
3.1
|
63.6
|
1.0
|
|
CE
|
D:MET248
|
3.3
|
57.6
|
1.0
|
|
CHA
|
D:HEC401
|
3.4
|
56.7
|
1.0
|
|
CHD
|
D:HEC401
|
3.4
|
60.0
|
1.0
|
|
CHB
|
D:HEC401
|
3.4
|
51.5
|
1.0
|
|
CHC
|
D:HEC401
|
3.4
|
62.0
|
1.0
|
|
CG
|
D:MET248
|
3.4
|
61.7
|
1.0
|
|
CB
|
D:MET248
|
4.0
|
62.5
|
1.0
|
|
ND1
|
D:HIS128
|
4.1
|
54.9
|
1.0
|
|
CG
|
D:HIS128
|
4.1
|
57.9
|
1.0
|
|
C3B
|
D:HEC401
|
4.2
|
54.4
|
1.0
|
|
C3C
|
D:HEC401
|
4.3
|
72.9
|
1.0
|
|
C2D
|
D:HEC401
|
4.3
|
67.1
|
1.0
|
|
C2B
|
D:HEC401
|
4.3
|
55.9
|
1.0
|
|
C3D
|
D:HEC401
|
4.3
|
66.4
|
1.0
|
|
C3A
|
D:HEC401
|
4.3
|
58.8
|
1.0
|
|
C2A
|
D:HEC401
|
4.3
|
60.9
|
1.0
|
|
C2C
|
D:HEC401
|
4.4
|
67.0
|
1.0
|
|
Iron binding site 6 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 6 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe501
b:34.2
occ:1.00
|
FE
|
N:HEM501
|
0.0
|
34.2
|
1.0
|
|
ND
|
N:HEM501
|
1.9
|
34.8
|
1.0
|
|
NA
|
N:HEM501
|
2.0
|
37.4
|
1.0
|
|
NE2
|
N:HIS82
|
2.0
|
34.4
|
1.0
|
|
NC
|
N:HEM501
|
2.0
|
37.6
|
1.0
|
|
NB
|
N:HEM501
|
2.1
|
35.2
|
1.0
|
|
NE2
|
N:HIS183
|
2.1
|
36.4
|
1.0
|
|
C4D
|
N:HEM501
|
2.9
|
34.3
|
1.0
|
|
C1D
|
N:HEM501
|
2.9
|
36.7
|
1.0
|
|
C1A
|
N:HEM501
|
3.0
|
36.8
|
1.0
|
|
CE1
|
N:HIS82
|
3.0
|
36.5
|
1.0
|
|
C4A
|
N:HEM501
|
3.0
|
39.4
|
1.0
|
|
C4B
|
N:HEM501
|
3.0
|
38.9
|
1.0
|
|
CE1
|
N:HIS183
|
3.0
|
36.2
|
1.0
|
|
C1C
|
N:HEM501
|
3.0
|
42.0
|
1.0
|
|
C4C
|
N:HEM501
|
3.0
|
38.3
|
1.0
|
|
C1B
|
N:HEM501
|
3.0
|
38.4
|
1.0
|
|
CD2
|
N:HIS82
|
3.1
|
37.0
|
1.0
|
|
CD2
|
N:HIS183
|
3.1
|
36.8
|
1.0
|
|
CHA
|
N:HEM501
|
3.4
|
33.3
|
1.0
|
|
CHD
|
N:HEM501
|
3.4
|
36.0
|
1.0
|
|
CHC
|
N:HEM501
|
3.4
|
39.4
|
1.0
|
|
CHB
|
N:HEM501
|
3.5
|
38.6
|
1.0
|
|
ND1
|
N:HIS82
|
4.1
|
41.1
|
1.0
|
|
C3D
|
N:HEM501
|
4.1
|
38.3
|
1.0
|
|
ND1
|
N:HIS183
|
4.1
|
39.2
|
1.0
|
|
C3A
|
N:HEM501
|
4.1
|
40.3
|
1.0
|
|
C2D
|
N:HEM501
|
4.1
|
37.8
|
1.0
|
|
C2A
|
N:HEM501
|
4.1
|
40.0
|
1.0
|
|
CG
|
N:HIS82
|
4.2
|
37.1
|
1.0
|
|
CG
|
N:HIS183
|
4.2
|
38.7
|
1.0
|
|
C2C
|
N:HEM501
|
4.2
|
44.5
|
1.0
|
|
C3C
|
N:HEM501
|
4.2
|
45.0
|
1.0
|
|
C3B
|
N:HEM501
|
4.2
|
42.8
|
1.0
|
|
C2B
|
N:HEM501
|
4.3
|
42.4
|
1.0
|
|
CA
|
N:GLY131
|
4.8
|
61.1
|
1.0
|
|
NE2
|
N:GLN43
|
4.9
|
47.3
|
1.0
|
|
Iron binding site 7 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 7 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe502
b:36.0
occ:1.00
|
FE
|
N:HEM502
|
0.0
|
36.0
|
1.0
|
|
ND
|
N:HEM502
|
1.9
|
38.3
|
1.0
|
|
NA
|
N:HEM502
|
2.0
|
37.4
|
1.0
|
|
NE2
|
N:HIS96
|
2.0
|
43.5
|
1.0
|
|
NC
|
N:HEM502
|
2.0
|
38.9
|
1.0
|
|
NB
|
N:HEM502
|
2.1
|
38.4
|
1.0
|
|
NE2
|
N:HIS197
|
2.2
|
37.3
|
1.0
|
|
C1D
|
N:HEM502
|
2.9
|
36.7
|
1.0
|
|
C4D
|
N:HEM502
|
2.9
|
40.7
|
1.0
|
|
C4C
|
N:HEM502
|
2.9
|
39.5
|
1.0
|
|
CE1
|
N:HIS96
|
2.9
|
45.1
|
1.0
|
|
C1A
|
N:HEM502
|
2.9
|
39.2
|
1.0
|
|
C4A
|
N:HEM502
|
3.0
|
38.5
|
1.0
|
|
C4B
|
N:HEM502
|
3.0
|
42.4
|
1.0
|
|
C1B
|
N:HEM502
|
3.0
|
41.9
|
1.0
|
|
CE1
|
N:HIS197
|
3.0
|
36.7
|
1.0
|
|
C1C
|
N:HEM502
|
3.0
|
43.8
|
1.0
|
|
CD2
|
N:HIS96
|
3.1
|
44.1
|
1.0
|
|
CD2
|
N:HIS197
|
3.2
|
40.4
|
1.0
|
|
CHD
|
N:HEM502
|
3.3
|
38.1
|
1.0
|
|
CHA
|
N:HEM502
|
3.3
|
40.3
|
1.0
|
|
CHB
|
N:HEM502
|
3.4
|
40.2
|
1.0
|
|
CHC
|
N:HEM502
|
3.5
|
43.2
|
1.0
|
|
ND1
|
N:HIS96
|
4.1
|
41.8
|
1.0
|
|
C3C
|
N:HEM502
|
4.1
|
42.3
|
1.0
|
|
C2A
|
N:HEM502
|
4.1
|
41.3
|
1.0
|
|
C3A
|
N:HEM502
|
4.1
|
37.7
|
1.0
|
|
C2D
|
N:HEM502
|
4.2
|
38.0
|
1.0
|
|
C3D
|
N:HEM502
|
4.2
|
39.6
|
1.0
|
|
C2C
|
N:HEM502
|
4.2
|
42.1
|
1.0
|
|
CG
|
N:HIS96
|
4.2
|
39.9
|
1.0
|
|
ND1
|
N:HIS197
|
4.2
|
40.0
|
1.0
|
|
C2B
|
N:HEM502
|
4.3
|
44.4
|
1.0
|
|
C3B
|
N:HEM502
|
4.3
|
48.7
|
1.0
|
|
CG
|
N:HIS197
|
4.3
|
40.4
|
1.0
|
|
Iron binding site 8 out
of 8 in 8abh
Go back to
Iron Binding Sites List in 8abh
Iron binding site 8 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Complex III2 From Yarrowia Lipolytica, Antimycin A Bound, B-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe401
b:55.4
occ:1.00
|
FE
|
O:HEC401
|
0.0
|
55.4
|
1.0
|
|
NE2
|
O:HIS128
|
2.0
|
60.1
|
1.0
|
|
ND
|
O:HEC401
|
2.0
|
60.6
|
1.0
|
|
NB
|
O:HEC401
|
2.0
|
59.4
|
1.0
|
|
NC
|
O:HEC401
|
2.0
|
62.1
|
1.0
|
|
NA
|
O:HEC401
|
2.1
|
56.7
|
1.0
|
|
SD
|
O:MET248
|
2.3
|
57.3
|
1.0
|
|
CE1
|
O:HIS128
|
2.9
|
53.7
|
1.0
|
|
C4B
|
O:HEC401
|
3.0
|
58.6
|
1.0
|
|
CD2
|
O:HIS128
|
3.0
|
65.2
|
1.0
|
|
C4C
|
O:HEC401
|
3.0
|
65.5
|
1.0
|
|
C4D
|
O:HEC401
|
3.0
|
59.6
|
1.0
|
|
C1D
|
O:HEC401
|
3.0
|
65.3
|
1.0
|
|
C1C
|
O:HEC401
|
3.0
|
63.9
|
1.0
|
|
C1A
|
O:HEC401
|
3.0
|
57.5
|
1.0
|
|
C1B
|
O:HEC401
|
3.0
|
59.9
|
1.0
|
|
C4A
|
O:HEC401
|
3.1
|
56.4
|
1.0
|
|
CE
|
O:MET248
|
3.3
|
63.6
|
1.0
|
|
CHA
|
O:HEC401
|
3.4
|
57.2
|
1.0
|
|
CHD
|
O:HEC401
|
3.4
|
60.7
|
1.0
|
|
CHC
|
O:HEC401
|
3.4
|
59.0
|
1.0
|
|
CHB
|
O:HEC401
|
3.4
|
51.3
|
1.0
|
|
CG
|
O:MET248
|
3.5
|
60.1
|
1.0
|
|
ND1
|
O:HIS128
|
4.0
|
53.7
|
1.0
|
|
CB
|
O:MET248
|
4.1
|
58.6
|
1.0
|
|
CG
|
O:HIS128
|
4.1
|
56.9
|
1.0
|
|
C3B
|
O:HEC401
|
4.3
|
56.9
|
1.0
|
|
C3C
|
O:HEC401
|
4.3
|
67.7
|
1.0
|
|
C3D
|
O:HEC401
|
4.3
|
61.0
|
1.0
|
|
C2B
|
O:HEC401
|
4.3
|
56.0
|
1.0
|
|
C2D
|
O:HEC401
|
4.3
|
63.6
|
1.0
|
|
C2C
|
O:HEC401
|
4.3
|
66.1
|
1.0
|
|
C3A
|
O:HEC401
|
4.4
|
56.9
|
1.0
|
|
C2A
|
O:HEC401
|
4.4
|
55.5
|
1.0
|
|
Reference:
J.P.Wieferig,
W.Kuhlbrandt.
Analysis of the Conformational Heterogeneity of the Rieske Iron-Sulfur Protein in Complex III2 By Cryo-Em Iucrj 2023.
ISSN: ESSN 2052-2525
Page generated: Fri Aug 9 17:11:10 2024
|
