Iron in PDB 8asv: Cryo-Em Structure of Yeast Elongator Complex

The binding sites of Iron atom in the Cryo-Em Structure of Yeast Elongator Complex (pdb code 8asv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Cryo-Em Structure of Yeast Elongator Complex, PDB code: 8asv:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Cryo-Em Structure of Yeast Elongator Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Yeast Elongator Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:60.9 occ:1.00 FE1 C:SF4601 0.0 60.9 1.0 S2 C:SF4601 2.3 60.9 1.0 SG C:CYS121 2.3 55.0 1.0 S4 C:SF4601 2.3 60.9 1.0 S3 C:SF4601 2.3 60.9 1.0 FE3 C:SF4601 2.7 60.9 1.0 FE4 C:SF4601 2.7 60.9 1.0 FE2 C:SF4601 2.7 60.9 1.0 CB C:CYS121 3.2 55.0 1.0 CB C:GLN134 3.8 56.8 1.0 S1 C:SF4601 3.9 60.9 1.0 SG C:CYS118 4.1 49.0 1.0 CG C:GLN134 4.4 56.8 1.0 CA C:CYS121 4.6 55.0 1.0 SG C:CYS108 4.7 56.9 1.0 N C:SER135 4.8 61.5 1.0 CB C:SER135 4.9 61.5 1.0 CB C:ILE117 5.0 48.9 1.0

Iron binding site 2 out of 4 in the Cryo-Em Structure of Yeast Elongator Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of Yeast Elongator Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:60.9 occ:1.00 FE2 C:SF4601 0.0 60.9 1.0 S4 C:SF4601 2.3 60.9 1.0 S3 C:SF4601 2.3 60.9 1.0 SG C:CYS108 2.3 56.9 1.0 S1 C:SF4601 2.3 60.9 1.0 FE4 C:SF4601 2.7 60.9 1.0 FE3 C:SF4601 2.7 60.9 1.0 FE1 C:SF4601 2.7 60.9 1.0 NE2 C:HIS110 3.5 49.3 1.0 CB C:CYS108 3.6 56.9 1.0 S2 C:SF4601 3.9 60.9 1.0 CD2 C:HIS110 4.0 49.3 1.0 CE1 C:HIS110 4.7 49.3 1.0 SG C:CYS118 4.8 49.0 1.0 SG C:CYS121 4.9 55.0 1.0 CA C:CYS108 4.9 56.9 1.0

Iron binding site 3 out of 4 in the Cryo-Em Structure of Yeast Elongator Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of Yeast Elongator Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:60.9 occ:1.00 FE3 C:SF4601 0.0 60.9 1.0 SG C:CYS118 2.3 49.0 1.0 S4 C:SF4601 2.3 60.9 1.0 S2 C:SF4601 2.3 60.9 1.0 S1 C:SF4601 2.3 60.9 1.0 FE1 C:SF4601 2.7 60.9 1.0 FE4 C:SF4601 2.7 60.9 1.0 FE2 C:SF4601 2.7 60.9 1.0 CB C:CYS118 3.7 49.0 1.0 NE2 C:HIS110 3.8 49.3 1.0 S3 C:SF4601 3.9 60.9 1.0 N C:CYS118 4.2 49.0 1.0 CB C:CYS121 4.3 55.0 1.0 CE1 C:HIS110 4.4 49.3 1.0 SG C:CYS121 4.4 55.0 1.0 CA C:CYS118 4.5 49.0 1.0 NH1 C:ARG269 4.7 44.6 1.0 SG C:CYS108 4.8 56.9 1.0 CD2 C:HIS110 4.8 49.3 1.0 OH C:TYR120 4.9 51.3 1.0

Iron binding site 4 out of 4 in the Cryo-Em Structure of Yeast Elongator Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryo-Em Structure of Yeast Elongator Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:60.9 occ:1.00 FE4 C:SF4601 0.0 60.9 1.0 S2 C:SF4601 2.3 60.9 1.0 S3 C:SF4601 2.3 60.9 1.0 S1 C:SF4601 2.3 60.9 1.0 FE2 C:SF4601 2.7 60.9 1.0 FE3 C:SF4601 2.7 60.9 1.0 FE1 C:SF4601 2.7 60.9 1.0 S4 C:SF4601 3.9 60.9 1.0 SG C:CYS121 4.7 55.0 1.0 SG C:CYS118 4.8 49.0 1.0 O C:GLY181 4.8 53.1 1.0 SG C:CYS108 4.8 56.9 1.0 CA C:GLY181 4.9 53.1 1.0

M.Jaciuk, D.Scherf, K.Kaszuba, M.Gaik, A.Koscielniak, R.Krutyholowa, M.Rawski, P.Indyka, A.Biela, D.Dobosz, T.-Y.Lin, N.Abbassi, A.Hammermeister, A.Chramiec-Glabik, J.Kosinski, R.Schaffrath, S.Glatt. Cryo-Em Structure of Yeast Elongator Complex To Be Published.