Iron in PDB 8asw: Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna

The binding sites of Iron atom in the Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna (pdb code 8asw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna, PDB code: 8asw:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:64.8 occ:1.00 FE1 C:SF4601 0.0 64.8 1.0 SG C:CYS121 2.2 54.7 1.0 S3 C:SF4601 2.3 64.8 1.0 S2 C:SF4601 2.3 64.8 1.0 S4 C:SF4601 2.3 64.8 1.0 FE3 C:SF4601 2.7 64.8 1.0 FE4 C:SF4601 2.7 64.8 1.0 FE2 C:SF4601 2.7 64.8 1.0 CB C:CYS121 3.6 54.7 1.0 S1 C:SF4601 3.9 64.8 1.0 CB C:CYS118 4.1 58.9 1.0 SG C:CYS118 4.1 58.9 1.0 O2' C:5AD602 4.3 60.1 1.0 NH1 C:ARG269 4.3 51.8 1.0 CB C:SER135 4.5 50.1 1.0 C2' C:5AD602 4.7 60.1 1.0 SG C:CYS108 4.8 48.0 1.0 CA C:CYS121 4.8 54.7 1.0 NE2 C:HIS110 4.9 56.4 1.0 C8 C:5AD602 5.0 60.1 1.0 CG C:GLN134 5.0 50.9 1.0

Iron binding site 2 out of 4 in the Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:64.8 occ:1.00 FE2 C:SF4601 0.0 64.8 1.0 NE2 C:HIS110 2.2 56.4 1.0 SG C:CYS118 2.3 58.9 1.0 S1 C:SF4601 2.3 64.8 1.0 S4 C:SF4601 2.3 64.8 1.0 S3 C:SF4601 2.3 64.8 1.0 FE4 C:SF4601 2.7 64.8 1.0 FE3 C:SF4601 2.7 64.8 1.0 FE1 C:SF4601 2.7 64.8 1.0 CE1 C:HIS110 2.8 56.4 1.0 CB C:CYS118 3.2 58.9 1.0 CD2 C:HIS110 3.4 56.4 1.0 CD1 C:ILE117 3.6 58.5 1.0 S2 C:SF4601 3.9 64.8 1.0 N C:CYS118 4.0 58.9 1.0 ND1 C:HIS110 4.1 56.4 1.0 CB C:CYS108 4.1 48.0 1.0 NH1 C:ARG269 4.2 51.8 1.0 CA C:CYS118 4.3 58.9 1.0 SG C:CYS108 4.3 48.0 1.0 CG C:HIS110 4.4 56.4 1.0 SG C:CYS121 4.5 54.7 1.0 CG1 C:ILE117 4.6 58.5 1.0 NE C:ARG232 4.9 46.0 1.0

Iron binding site 3 out of 4 in the Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:64.8 occ:1.00 FE3 C:SF4601 0.0 64.8 1.0 S2 C:SF4601 2.3 64.8 1.0 S1 C:SF4601 2.3 64.8 1.0 S4 C:SF4601 2.3 64.8 1.0 FE1 C:SF4601 2.7 64.8 1.0 FE4 C:SF4601 2.7 64.8 1.0 FE2 C:SF4601 2.7 64.8 1.0 NH1 C:ARG269 2.8 51.8 1.0 S3 C:SF4601 3.9 64.8 1.0 CZ C:ARG269 3.9 51.8 1.0 NE2 C:HIS110 4.0 56.4 1.0 SG C:CYS118 4.1 58.9 1.0 NE C:ARG232 4.1 46.0 1.0 NH2 C:ARG269 4.4 51.8 1.0 CG C:ARG232 4.5 46.0 1.0 CD C:ARG232 4.5 46.0 1.0 CD2 C:HIS110 4.6 56.4 1.0 SG C:CYS108 4.9 48.0 1.0 O2' C:5AD602 4.9 60.1 1.0 SG C:CYS121 4.9 54.7 1.0 OG1 C:THR182 5.0 41.0 1.0 NE C:ARG269 5.0 51.8 1.0

Iron binding site 4 out of 4 in the Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe601 b:64.8 occ:1.00 FE4 C:SF4601 0.0 64.8 1.0 SG C:CYS108 2.3 48.0 1.0 S3 C:SF4601 2.3 64.8 1.0 S2 C:SF4601 2.3 64.8 1.0 S1 C:SF4601 2.3 64.8 1.0 FE1 C:SF4601 2.7 64.8 1.0 FE3 C:SF4601 2.7 64.8 1.0 FE2 C:SF4601 2.7 64.8 1.0 CB C:CYS108 3.2 48.0 1.0 S4 C:SF4601 3.9 64.8 1.0 NE2 C:HIS110 4.2 56.4 1.0 CG C:GLN134 4.2 50.9 1.0 OG1 C:THR182 4.3 41.0 1.0 SG C:CYS121 4.5 54.7 1.0 CA C:CYS108 4.6 48.0 1.0 CA C:GLY181 4.7 42.9 1.0 N C:THR182 4.8 41.0 1.0 C C:GLY181 4.8 42.9 1.0 CD1 C:ILE117 4.9 58.5 1.0 CD2 C:HIS110 4.9 56.4 1.0 SG C:CYS118 5.0 58.9 1.0

M.Jaciuk, D.Scherf, K.Kaszuba, M.Gaik, A.Koscielniak, R.Krutyholowa, M.Rawski, P.Indyka, A.Biela, D.Dobosz, T.-Y.Lin, N.Abbassi, A.Hammermeister, A.Chramiec-Glabik, J.Kosinski, R.Schaffrath, S.Glatt. Cryo-Em Structure of Yeast ELP123 in Complex with Alanine Trna To Be Published.