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Iron in PDB 8bkh: Carboxymyoglobin Dark State For Comparison with Power Titration and 23 / 101 Mj/CM2 Time Series

Protein crystallography data

The structure of Carboxymyoglobin Dark State For Comparison with Power Titration and 23 / 101 Mj/CM2 Time Series, PDB code: 8bkh was solved by T.Barends, I.Schlichting, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.44 / 1.35
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 64.1, 28.8, 35.8, 90, 106.9, 90
R / Rfree (%) 18.3 / 22.7

Iron Binding Sites:

The binding sites of Iron atom in the Carboxymyoglobin Dark State For Comparison with Power Titration and 23 / 101 Mj/CM2 Time Series (pdb code 8bkh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Carboxymyoglobin Dark State For Comparison with Power Titration and 23 / 101 Mj/CM2 Time Series, PDB code: 8bkh:

Iron binding site 1 out of 1 in 8bkh

Go back to Iron Binding Sites List in 8bkh
Iron binding site 1 out of 1 in the Carboxymyoglobin Dark State For Comparison with Power Titration and 23 / 101 Mj/CM2 Time Series


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Carboxymyoglobin Dark State For Comparison with Power Titration and 23 / 101 Mj/CM2 Time Series within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:10.3
occ:1.00
FE A:HEM201 0.0 10.3 1.0
C A:CMO204 1.7 12.2 1.0
ND A:HEM201 1.9 12.3 1.0
NA A:HEM201 2.0 10.3 1.0
NB A:HEM201 2.1 9.9 1.0
NC A:HEM201 2.1 10.3 1.0
NE2 A:HIS93 2.1 10.0 1.0
O A:CMO204 2.9 17.5 1.0
C4D A:HEM201 2.9 12.3 1.0
C1D A:HEM201 2.9 11.3 1.0
C1A A:HEM201 3.0 10.4 1.0
C4A A:HEM201 3.0 11.3 1.0
CE1 A:HIS93 3.0 11.8 1.0
C4C A:HEM201 3.0 10.7 1.0
C4B A:HEM201 3.0 9.5 1.0
C1B A:HEM201 3.0 9.9 1.0
C1C A:HEM201 3.1 10.3 1.0
CD2 A:HIS93 3.1 9.6 1.0
CHA A:HEM201 3.4 11.0 1.0
CHD A:HEM201 3.4 12.1 1.0
CHB A:HEM201 3.4 10.4 1.0
CHC A:HEM201 3.5 10.4 1.0
ND1 A:HIS93 4.2 12.6 1.0
C3D A:HEM201 4.2 12.3 1.0
C2D A:HEM201 4.2 11.4 1.0
C2A A:HEM201 4.2 10.5 1.0
C3A A:HEM201 4.2 11.4 1.0
C3C A:HEM201 4.3 11.0 1.0
CG A:HIS93 4.3 10.6 1.0
C2B A:HEM201 4.3 10.2 1.0
C2C A:HEM201 4.3 11.3 1.0
C3B A:HEM201 4.3 10.8 1.0
NE2 A:HIS64 4.6 17.9 1.0
CG2 A:VAL68 4.7 13.9 1.0

Reference:

T.Barends, I.Schlichting. Carboxymyoglobin Photolysis Power Titration, 6 Mj/CM2 Fluence, Difference Refined To Be Published.
Page generated: Fri Aug 9 19:54:27 2024

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