Iron in PDB 8boq: A. Vinelandii Fe-Nitrogenase Fefe Protein
Enzymatic activity of A. Vinelandii Fe-Nitrogenase Fefe Protein
All present enzymatic activity of A. Vinelandii Fe-Nitrogenase Fefe Protein:
1.18.6.1;
Protein crystallography data
The structure of A. Vinelandii Fe-Nitrogenase Fefe Protein, PDB code: 8boq
was solved by
C.Trncik,
F.Detemple,
O.Einsle,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
20.00 /
1.55
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
109.969,
151.048,
158.863,
90,
90,
90
|
R / Rfree (%)
|
16.9 /
21.6
|
Other elements in 8boq:
The structure of A. Vinelandii Fe-Nitrogenase Fefe Protein also contains other interesting chemical elements:
Iron Binding Sites:
Iron binding site 1 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 1 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:13.4
occ:1.00
|
FE8
|
A:S5Q601
|
0.0
|
13.4
|
1.0
|
O6
|
A:HCA602
|
2.1
|
14.1
|
1.0
|
O7
|
A:HCA602
|
2.1
|
13.4
|
1.0
|
ND1
|
A:HIS423
|
2.2
|
12.2
|
1.0
|
S1B
|
A:S5Q601
|
2.3
|
14.8
|
1.0
|
S4B
|
A:S5Q601
|
2.3
|
13.8
|
1.0
|
S3B
|
A:S5Q601
|
2.4
|
16.1
|
1.0
|
FE7
|
A:S5Q601
|
2.8
|
14.8
|
1.0
|
FE5
|
A:S5Q601
|
2.9
|
15.2
|
1.0
|
FE6
|
A:S5Q601
|
2.9
|
17.0
|
1.0
|
C7
|
A:HCA602
|
3.0
|
14.0
|
1.0
|
C3
|
A:HCA602
|
3.1
|
13.7
|
1.0
|
CE1
|
A:HIS423
|
3.2
|
13.2
|
1.0
|
CG
|
A:HIS423
|
3.3
|
13.2
|
1.0
|
CB
|
A:HIS423
|
3.6
|
13.7
|
1.0
|
CX
|
A:S5Q601
|
3.8
|
16.0
|
1.0
|
C2
|
A:HCA602
|
4.0
|
14.6
|
1.0
|
O
|
A:HOH887
|
4.2
|
8.8
|
1.0
|
O5
|
A:HCA602
|
4.2
|
12.2
|
1.0
|
C4
|
A:HCA602
|
4.2
|
13.9
|
1.0
|
C5
|
A:HCA602
|
4.3
|
14.4
|
1.0
|
NE2
|
A:HIS423
|
4.3
|
12.2
|
1.0
|
CD2
|
A:HIS423
|
4.4
|
13.1
|
1.0
|
CA
|
A:HIS423
|
4.4
|
13.9
|
1.0
|
NZ
|
A:LYS83
|
4.5
|
17.4
|
1.0
|
O2
|
A:HCA602
|
4.6
|
16.4
|
1.0
|
O
|
A:O604
|
4.9
|
16.1
|
0.5
|
C1
|
A:HCA602
|
4.9
|
15.8
|
1.0
|
|
Iron binding site 2 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 2 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:15.2
occ:1.00
|
FE5
|
A:S5Q601
|
0.0
|
15.2
|
1.0
|
CX
|
A:S5Q601
|
2.0
|
16.0
|
1.0
|
S4B
|
A:S5Q601
|
2.2
|
13.8
|
1.0
|
S1B
|
A:S5Q601
|
2.2
|
14.8
|
1.0
|
S3A
|
A:S5Q601
|
2.3
|
13.8
|
1.0
|
FE4
|
A:S5Q601
|
2.6
|
16.1
|
1.0
|
FE7
|
A:S5Q601
|
2.6
|
14.8
|
1.0
|
FE6
|
A:S5Q601
|
2.6
|
17.0
|
1.0
|
FE8
|
A:S5Q601
|
2.9
|
13.4
|
1.0
|
FE2
|
A:S5Q601
|
3.7
|
15.6
|
1.0
|
FE3
|
A:S5Q601
|
3.7
|
15.9
|
1.0
|
S3B
|
A:S5Q601
|
3.8
|
16.1
|
1.0
|
ND1
|
A:HIS423
|
3.8
|
12.2
|
1.0
|
O
|
A:O604
|
4.2
|
16.1
|
0.5
|
N
|
A:GLY336
|
4.2
|
19.7
|
1.0
|
CE1
|
A:HIS423
|
4.2
|
13.2
|
1.0
|
S4A
|
A:S5Q601
|
4.3
|
17.1
|
1.0
|
N
|
A:GLY337
|
4.3
|
16.5
|
1.0
|
S1A
|
A:S5Q601
|
4.3
|
16.4
|
1.0
|
S2B
|
A:S5Q601
|
4.5
|
15.3
|
0.5
|
S5A
|
A:S5Q601
|
4.5
|
15.8
|
1.0
|
CD
|
A:LYS339
|
4.6
|
19.8
|
1.0
|
CA
|
A:GLY336
|
4.6
|
18.2
|
1.0
|
CE
|
A:LYS339
|
4.6
|
20.3
|
1.0
|
NZ
|
A:LYS339
|
4.6
|
21.6
|
1.0
|
CG
|
A:HIS423
|
4.7
|
13.2
|
1.0
|
O7
|
A:HCA602
|
4.7
|
13.4
|
1.0
|
O6
|
A:HCA602
|
4.7
|
14.1
|
1.0
|
CZ
|
A:PHE362
|
4.8
|
23.8
|
1.0
|
C
|
A:GLY336
|
4.9
|
17.5
|
1.0
|
FE1
|
A:S5Q601
|
5.0
|
16.1
|
1.0
|
CB
|
A:PRO335
|
5.0
|
19.3
|
1.0
|
|
Iron binding site 3 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 3 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:14.8
occ:1.00
|
FE7
|
A:S5Q601
|
0.0
|
14.8
|
1.0
|
CX
|
A:S5Q601
|
2.0
|
16.0
|
1.0
|
S4B
|
A:S5Q601
|
2.2
|
13.8
|
1.0
|
S3B
|
A:S5Q601
|
2.3
|
16.1
|
1.0
|
S5A
|
A:S5Q601
|
2.3
|
15.8
|
1.0
|
FE6
|
A:S5Q601
|
2.6
|
17.0
|
1.0
|
FE3
|
A:S5Q601
|
2.6
|
15.9
|
1.0
|
FE5
|
A:S5Q601
|
2.6
|
15.2
|
1.0
|
FE8
|
A:S5Q601
|
2.8
|
13.4
|
1.0
|
NZ
|
A:LYS83
|
3.5
|
17.4
|
1.0
|
S1B
|
A:S5Q601
|
3.7
|
14.8
|
1.0
|
FE2
|
A:S5Q601
|
3.7
|
15.6
|
1.0
|
FE4
|
A:S5Q601
|
3.7
|
16.1
|
1.0
|
O6
|
A:HCA602
|
3.8
|
14.1
|
1.0
|
O
|
A:HOH887
|
3.9
|
8.8
|
1.0
|
O
|
A:O604
|
4.2
|
16.1
|
0.5
|
S2A
|
A:S5Q601
|
4.3
|
16.5
|
1.0
|
S4A
|
A:S5Q601
|
4.4
|
17.1
|
1.0
|
S2B
|
A:S5Q601
|
4.4
|
15.3
|
0.5
|
S3A
|
A:S5Q601
|
4.5
|
13.8
|
1.0
|
O
|
A:HOH877
|
4.5
|
13.2
|
1.0
|
O
|
A:HOH878
|
4.6
|
22.1
|
1.0
|
NZ
|
A:LYS339
|
4.6
|
21.6
|
1.0
|
O7
|
A:HCA602
|
4.6
|
13.4
|
1.0
|
CG1
|
A:VAL57
|
4.7
|
15.4
|
1.0
|
ND1
|
A:HIS423
|
4.7
|
12.2
|
1.0
|
C7
|
A:HCA602
|
4.8
|
14.0
|
1.0
|
CE
|
A:LYS83
|
4.8
|
16.0
|
1.0
|
|
Iron binding site 4 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 4 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:17.0
occ:1.00
|
FE6
|
A:S5Q601
|
0.0
|
17.0
|
1.0
|
O
|
A:O604
|
2.0
|
16.1
|
0.5
|
CX
|
A:S5Q601
|
2.0
|
16.0
|
1.0
|
S2B
|
A:S5Q601
|
2.2
|
15.3
|
0.5
|
S3B
|
A:S5Q601
|
2.2
|
16.1
|
1.0
|
S1B
|
A:S5Q601
|
2.2
|
14.8
|
1.0
|
FE2
|
A:S5Q601
|
2.6
|
15.6
|
1.0
|
FE7
|
A:S5Q601
|
2.6
|
14.8
|
1.0
|
FE5
|
A:S5Q601
|
2.6
|
15.2
|
1.0
|
FE8
|
A:S5Q601
|
2.9
|
13.4
|
1.0
|
FE4
|
A:S5Q601
|
3.7
|
16.1
|
1.0
|
FE3
|
A:S5Q601
|
3.7
|
15.9
|
1.0
|
NE2
|
A:GLN176
|
3.8
|
15.7
|
0.5
|
S4B
|
A:S5Q601
|
3.8
|
13.8
|
1.0
|
CZ
|
A:PHE362
|
3.8
|
23.8
|
1.0
|
OE1
|
A:GLN176
|
3.9
|
15.7
|
0.5
|
O7
|
A:HCA602
|
4.0
|
13.4
|
1.0
|
CE2
|
A:PHE362
|
4.1
|
23.3
|
1.0
|
CD
|
A:GLN176
|
4.3
|
16.8
|
0.5
|
S2A
|
A:S5Q601
|
4.3
|
16.5
|
1.0
|
S1A
|
A:S5Q601
|
4.4
|
16.4
|
1.0
|
CG1
|
A:VAL57
|
4.4
|
15.4
|
1.0
|
CG2
|
A:VAL57
|
4.4
|
15.6
|
1.0
|
S5A
|
A:S5Q601
|
4.5
|
15.8
|
1.0
|
S3A
|
A:S5Q601
|
4.5
|
13.8
|
1.0
|
O6
|
A:HCA602
|
4.6
|
14.1
|
1.0
|
ND1
|
A:HIS423
|
4.8
|
12.2
|
1.0
|
CE1
|
A:PHE362
|
5.0
|
22.5
|
1.0
|
|
Iron binding site 5 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 5 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:16.1
occ:1.00
|
FE4
|
A:S5Q601
|
0.0
|
16.1
|
1.0
|
CX
|
A:S5Q601
|
2.0
|
16.0
|
1.0
|
S3A
|
A:S5Q601
|
2.2
|
13.8
|
1.0
|
S1A
|
A:S5Q601
|
2.3
|
16.4
|
1.0
|
S4A
|
A:S5Q601
|
2.3
|
17.1
|
1.0
|
FE5
|
A:S5Q601
|
2.6
|
15.2
|
1.0
|
FE2
|
A:S5Q601
|
2.6
|
15.6
|
1.0
|
FE1
|
A:S5Q601
|
2.6
|
16.1
|
1.0
|
FE3
|
A:S5Q601
|
2.6
|
15.9
|
1.0
|
FE6
|
A:S5Q601
|
3.7
|
17.0
|
1.0
|
FE7
|
A:S5Q601
|
3.7
|
14.8
|
1.0
|
S2A
|
A:S5Q601
|
3.8
|
16.5
|
1.0
|
N
|
A:SER338
|
3.9
|
18.7
|
1.0
|
O
|
A:O604
|
4.2
|
16.1
|
0.5
|
S4B
|
A:S5Q601
|
4.2
|
13.8
|
1.0
|
CA
|
A:GLY337
|
4.3
|
17.1
|
1.0
|
S1B
|
A:S5Q601
|
4.3
|
14.8
|
1.0
|
CB
|
A:SER338
|
4.4
|
21.6
|
1.0
|
N
|
A:GLY337
|
4.4
|
16.5
|
1.0
|
C
|
A:GLY337
|
4.4
|
17.5
|
1.0
|
S2B
|
A:S5Q601
|
4.5
|
15.3
|
0.5
|
SG
|
A:CYS257
|
4.5
|
15.4
|
1.0
|
S5A
|
A:S5Q601
|
4.6
|
15.8
|
1.0
|
N
|
A:LYS339
|
4.6
|
18.0
|
1.0
|
CA
|
A:SER338
|
4.7
|
19.4
|
1.0
|
OG
|
A:SER338
|
4.7
|
25.1
|
1.0
|
CZ
|
A:PHE362
|
4.8
|
23.8
|
1.0
|
CE
|
A:LYS339
|
4.8
|
20.3
|
1.0
|
CG
|
A:LYS339
|
4.8
|
19.8
|
1.0
|
O
|
A:HOH939
|
4.8
|
26.9
|
1.0
|
CD
|
A:LYS339
|
4.9
|
19.8
|
1.0
|
|
Iron binding site 6 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 6 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:16.1
occ:1.00
|
FE1
|
A:S5Q601
|
0.0
|
16.1
|
1.0
|
S2A
|
A:S5Q601
|
2.2
|
16.5
|
1.0
|
SG
|
A:CYS257
|
2.3
|
15.4
|
1.0
|
S4A
|
A:S5Q601
|
2.3
|
17.1
|
1.0
|
S1A
|
A:S5Q601
|
2.3
|
16.4
|
1.0
|
FE4
|
A:S5Q601
|
2.6
|
16.1
|
1.0
|
FE3
|
A:S5Q601
|
2.6
|
15.9
|
1.0
|
FE2
|
A:S5Q601
|
2.7
|
15.6
|
1.0
|
CB
|
A:CYS257
|
3.3
|
16.0
|
1.0
|
CX
|
A:S5Q601
|
3.4
|
16.0
|
1.0
|
OG
|
A:SER338
|
3.9
|
25.1
|
1.0
|
OG
|
A:SER260
|
3.9
|
17.2
|
1.0
|
CB
|
A:SER260
|
4.1
|
16.5
|
1.0
|
CB
|
A:SER338
|
4.1
|
21.6
|
1.0
|
CE2
|
A:TYR211
|
4.4
|
15.2
|
1.0
|
O
|
A:HOH939
|
4.6
|
26.9
|
1.0
|
CA
|
A:CYS257
|
4.6
|
17.1
|
1.0
|
O
|
A:O604
|
4.6
|
16.1
|
0.5
|
S3A
|
A:S5Q601
|
4.7
|
13.8
|
1.0
|
CD2
|
A:TYR211
|
4.8
|
15.8
|
1.0
|
N
|
A:SER338
|
4.8
|
18.7
|
1.0
|
N
|
A:SER260
|
4.8
|
17.0
|
1.0
|
S5A
|
A:S5Q601
|
4.8
|
15.8
|
1.0
|
S2B
|
A:S5Q601
|
4.9
|
15.3
|
0.5
|
FE5
|
A:S5Q601
|
5.0
|
15.2
|
1.0
|
|
Iron binding site 7 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 7 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:15.9
occ:1.00
|
FE3
|
A:S5Q601
|
0.0
|
15.9
|
1.0
|
CX
|
A:S5Q601
|
2.0
|
16.0
|
1.0
|
S5A
|
A:S5Q601
|
2.2
|
15.8
|
1.0
|
S4A
|
A:S5Q601
|
2.3
|
17.1
|
1.0
|
S2A
|
A:S5Q601
|
2.3
|
16.5
|
1.0
|
FE1
|
A:S5Q601
|
2.6
|
16.1
|
1.0
|
FE4
|
A:S5Q601
|
2.6
|
16.1
|
1.0
|
FE7
|
A:S5Q601
|
2.6
|
14.8
|
1.0
|
FE2
|
A:S5Q601
|
2.7
|
15.6
|
1.0
|
FE5
|
A:S5Q601
|
3.7
|
15.2
|
1.0
|
FE6
|
A:S5Q601
|
3.7
|
17.0
|
1.0
|
S1A
|
A:S5Q601
|
3.9
|
16.4
|
1.0
|
CD2
|
A:TYR211
|
4.1
|
15.8
|
1.0
|
S4B
|
A:S5Q601
|
4.2
|
13.8
|
1.0
|
O
|
A:O604
|
4.2
|
16.1
|
0.5
|
O
|
A:HOH878
|
4.2
|
22.1
|
1.0
|
S3B
|
A:S5Q601
|
4.4
|
16.1
|
1.0
|
O
|
A:HOH952
|
4.4
|
15.0
|
1.0
|
S3A
|
A:S5Q601
|
4.4
|
13.8
|
1.0
|
S2B
|
A:S5Q601
|
4.5
|
15.3
|
0.5
|
CE2
|
A:TYR211
|
4.5
|
15.2
|
1.0
|
CG1
|
A:VAL57
|
4.5
|
15.4
|
1.0
|
SG
|
A:CYS257
|
4.8
|
15.4
|
1.0
|
O
|
A:HOH877
|
4.9
|
13.2
|
1.0
|
|
Iron binding site 8 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 8 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:15.6
occ:1.00
|
FE2
|
A:S5Q601
|
0.0
|
15.6
|
1.0
|
O
|
A:O604
|
2.0
|
16.1
|
0.5
|
CX
|
A:S5Q601
|
2.0
|
16.0
|
1.0
|
S2B
|
A:S5Q601
|
2.2
|
15.3
|
0.5
|
S1A
|
A:S5Q601
|
2.3
|
16.4
|
1.0
|
S2A
|
A:S5Q601
|
2.3
|
16.5
|
1.0
|
FE4
|
A:S5Q601
|
2.6
|
16.1
|
1.0
|
FE6
|
A:S5Q601
|
2.6
|
17.0
|
1.0
|
FE1
|
A:S5Q601
|
2.7
|
16.1
|
1.0
|
FE3
|
A:S5Q601
|
2.7
|
15.9
|
1.0
|
FE5
|
A:S5Q601
|
3.7
|
15.2
|
1.0
|
FE7
|
A:S5Q601
|
3.7
|
14.8
|
1.0
|
CZ
|
A:PHE362
|
3.8
|
23.8
|
1.0
|
S4A
|
A:S5Q601
|
3.9
|
17.1
|
1.0
|
CG1
|
A:VAL57
|
4.2
|
15.4
|
1.0
|
CE1
|
A:PHE362
|
4.3
|
22.5
|
1.0
|
S1B
|
A:S5Q601
|
4.3
|
14.8
|
1.0
|
CE1
|
A:HIS180
|
4.3
|
17.1
|
1.0
|
OE1
|
A:GLN176
|
4.3
|
15.7
|
0.5
|
S3B
|
A:S5Q601
|
4.3
|
16.1
|
1.0
|
NE2
|
A:HIS180
|
4.4
|
16.7
|
1.0
|
S3A
|
A:S5Q601
|
4.5
|
13.8
|
1.0
|
S5A
|
A:S5Q601
|
4.5
|
15.8
|
1.0
|
SG
|
A:CYS257
|
4.6
|
15.4
|
1.0
|
CE2
|
A:PHE362
|
4.7
|
23.3
|
1.0
|
CB
|
A:SER260
|
4.8
|
16.5
|
1.0
|
|
Iron binding site 9 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 9 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe603
b:17.6
occ:1.00
|
FE1
|
A:CLF603
|
0.0
|
17.6
|
1.0
|
SG
|
A:CYS138
|
2.3
|
17.3
|
1.0
|
S2A
|
A:CLF603
|
2.3
|
15.3
|
1.0
|
S3A
|
A:CLF603
|
2.3
|
15.9
|
1.0
|
S1
|
A:CLF603
|
2.4
|
15.2
|
1.0
|
FE2
|
A:CLF603
|
2.5
|
16.6
|
1.0
|
FE4
|
A:CLF603
|
2.5
|
15.3
|
1.0
|
FE3
|
A:CLF603
|
2.9
|
13.8
|
1.0
|
CB
|
A:CYS138
|
3.3
|
18.4
|
1.0
|
O
|
B:HOH772
|
3.7
|
17.4
|
1.0
|
S4A
|
A:CLF603
|
3.8
|
15.8
|
1.0
|
N
|
A:CYS138
|
3.9
|
17.7
|
1.0
|
CA
|
A:GLY170
|
4.0
|
17.4
|
1.0
|
SG
|
B:CYS45
|
4.1
|
14.4
|
1.0
|
N
|
A:GLY170
|
4.2
|
17.9
|
1.0
|
CA
|
A:CYS138
|
4.2
|
17.5
|
1.0
|
SG
|
A:CYS75
|
4.3
|
13.2
|
1.0
|
FE8
|
A:CLF603
|
4.4
|
16.5
|
1.0
|
FE5
|
A:CLF603
|
4.5
|
16.4
|
1.0
|
O
|
A:HOH935
|
4.6
|
11.8
|
1.0
|
FE6
|
A:CLF603
|
4.9
|
19.5
|
1.0
|
SG
|
A:CYS49
|
4.9
|
14.6
|
1.0
|
SG
|
B:CYS104
|
5.0
|
16.4
|
1.0
|
C
|
A:GLY170
|
5.0
|
17.2
|
1.0
|
|
Iron binding site 10 out
of 32 in 8boq
Go back to
Iron Binding Sites List in 8boq
Iron binding site 10 out
of 32 in the A. Vinelandii Fe-Nitrogenase Fefe Protein
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of A. Vinelandii Fe-Nitrogenase Fefe Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe603
b:16.6
occ:1.00
|
FE2
|
A:CLF603
|
0.0
|
16.6
|
1.0
|
S2A
|
A:CLF603
|
2.3
|
15.3
|
1.0
|
S4A
|
A:CLF603
|
2.3
|
15.8
|
1.0
|
SG
|
B:CYS45
|
2.4
|
14.4
|
1.0
|
S1
|
A:CLF603
|
2.5
|
15.2
|
1.0
|
FE1
|
A:CLF603
|
2.5
|
17.6
|
1.0
|
FE4
|
A:CLF603
|
2.6
|
15.3
|
1.0
|
FE3
|
A:CLF603
|
2.8
|
13.8
|
1.0
|
FE8
|
A:CLF603
|
2.9
|
16.5
|
1.0
|
N
|
B:CYS45
|
3.4
|
15.8
|
1.0
|
CB
|
B:CYS45
|
3.7
|
14.3
|
1.0
|
CA
|
B:CYS45
|
3.8
|
14.4
|
1.0
|
FE5
|
A:CLF603
|
3.8
|
16.4
|
1.0
|
S3A
|
A:CLF603
|
3.8
|
15.9
|
1.0
|
S4B
|
A:CLF603
|
3.9
|
14.1
|
1.0
|
C
|
B:GLY44
|
4.0
|
14.9
|
1.0
|
O
|
B:HOH772
|
4.0
|
17.4
|
1.0
|
CA
|
B:GLY44
|
4.3
|
15.8
|
1.0
|
SG
|
A:CYS138
|
4.5
|
17.3
|
1.0
|
N
|
B:GLY44
|
4.5
|
14.6
|
1.0
|
SG
|
A:CYS75
|
4.5
|
13.2
|
1.0
|
FE6
|
A:CLF603
|
4.6
|
19.5
|
1.0
|
O
|
B:GLY44
|
4.6
|
14.2
|
1.0
|
O
|
B:GLY42
|
4.7
|
17.3
|
1.0
|
SG
|
A:CYS49
|
4.8
|
14.6
|
1.0
|
C
|
B:GLY42
|
4.9
|
16.4
|
1.0
|
CA
|
B:GLY42
|
4.9
|
16.6
|
1.0
|
|
Reference:
C.Trncik,
F.Detemple,
O.Einsle.
Iron-Only Fe-Nitrogenase Underscores Common Catalytic Principles in Biological Nitrogen Fixation Nat Catal 2023.
ISSN: ESSN 2520-1158
DOI: 10.1038/S41929-023-00952-1
Page generated: Fri Aug 9 19:56:25 2024
|