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Iron in PDB 8brl: Room Temperature Crystal Structure of Cytochrome C' From Hydrogenophilus Thermoluteolus

Protein crystallography data

The structure of Room Temperature Crystal Structure of Cytochrome C' From Hydrogenophilus Thermoluteolus, PDB code: 8brl was solved by S.Fujii, M.A.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.09 / 1.88
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 83.536, 83.536, 88.566, 90, 90, 120
R / Rfree (%) 17.8 / 20.3

Iron Binding Sites:

The binding sites of Iron atom in the Room Temperature Crystal Structure of Cytochrome C' From Hydrogenophilus Thermoluteolus (pdb code 8brl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Room Temperature Crystal Structure of Cytochrome C' From Hydrogenophilus Thermoluteolus, PDB code: 8brl:

Iron binding site 1 out of 1 in 8brl

Go back to Iron Binding Sites List in 8brl
Iron binding site 1 out of 1 in the Room Temperature Crystal Structure of Cytochrome C' From Hydrogenophilus Thermoluteolus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Room Temperature Crystal Structure of Cytochrome C' From Hydrogenophilus Thermoluteolus within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:20.8
occ:1.00
FE D:HEC201 0.0 20.8 1.0
NE2 D:HIS128 2.0 20.5 1.0
ND D:HEC201 2.0 20.3 1.0
NB D:HEC201 2.0 20.0 1.0
NC D:HEC201 2.1 21.6 1.0
NA D:HEC201 2.1 20.7 1.0
CE1 D:HIS128 3.0 20.8 1.0
C4B D:HEC201 3.0 19.6 1.0
C1D D:HEC201 3.0 21.5 1.0
C4A D:HEC201 3.0 21.9 1.0
CD2 D:HIS128 3.1 19.5 1.0
C4D D:HEC201 3.1 19.5 1.0
C1C D:HEC201 3.1 19.6 1.0
C1B D:HEC201 3.1 19.9 1.0
C1A D:HEC201 3.1 19.5 1.0
C4C D:HEC201 3.1 20.8 1.0
CHC D:HEC201 3.4 18.8 1.0
CD1 D:TYR16 3.4 20.7 1.0
CHB D:HEC201 3.4 20.9 1.0
CHD D:HEC201 3.5 19.9 1.0
CHA D:HEC201 3.5 20.4 1.0
CG D:TYR16 3.5 21.4 1.0
CE1 D:TYR16 3.8 21.5 1.0
CD2 D:TYR16 4.0 22.4 1.0
CB D:TYR16 4.0 20.9 1.0
ND1 D:HIS128 4.1 19.7 1.0
CG D:HIS128 4.2 21.0 1.0
CZ D:TYR16 4.2 21.4 1.0
CE2 D:TYR16 4.3 19.9 1.0
C3B D:HEC201 4.3 18.6 1.0
C3A D:HEC201 4.3 21.9 1.0
C2A D:HEC201 4.3 24.0 1.0
C3D D:HEC201 4.4 21.8 1.0
NH1 D:ARG132 4.4 31.8 1.0
C2B D:HEC201 4.4 19.0 1.0
C2D D:HEC201 4.4 20.9 1.0
C3C D:HEC201 4.4 19.5 1.0
C2C D:HEC201 4.4 21.3 1.0

Reference:

H.Mikolajek, J.Sanchez-Weatherby, J.Sandy, R.J.Gildea, I.Campeotto, H.Cheruvara, J.D.Clarke, T.Foster, S.Fujii, I.T.Paulsen, B.S.Shah, M.A.Hough. Protein-to-Structure Pipeline For Ambient-Temperature Crystallography at Vmxi Iucrj 2023.
ISSN: ESSN 2052-2525
DOI: 10.1107/S2052252523003810
Page generated: Fri Aug 9 20:08:26 2024

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