Iron in PDB 8cdf: Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host

Enzymatic activity of Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host

All present enzymatic activity of Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host:
1.14.11.64;

Protein crystallography data

The structure of Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host, PDB code: 8cdf was solved by A.A.Adeyeye, W.Schubert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.35 / 1.77
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 121.132, 121.132, 136.487, 90, 90, 90
R / Rfree (%) 20.1 / 23

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host (pdb code 8cdf). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host, PDB code: 8cdf:

Iron binding site 1 out of 1 in 8cdf

Go back to Iron Binding Sites List in 8cdf
Iron binding site 1 out of 1 in the Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:37.6
occ:1.00
 NE2 A:HIS160 2.3 32.2 1.0
NE2 A:HIS292 2.3 35.8 1.0
OD1 A:ASP162 2.3 36.4 1.0
O A:HOH664 2.5 51.3 1.0
O A:HOH674 2.7 51.9 1.0
CE1 A:HIS160 3.1 31.4 1.0
CE1 A:HIS292 3.1 30.5 1.0
CG A:ASP162 3.2 38.4 1.0
CD2 A:HIS160 3.3 26.4 1.0
CD2 A:HIS292 3.3 34.8 1.0
O A:HOH562 3.3 51.3 1.0
OD2 A:ASP162 3.4 36.1 1.0
ND1 A:HIS160 4.2 29.1 1.0
ND1 A:HIS292 4.2 33.4 1.0
CG A:HIS160 4.4 29.9 1.0
CG A:HIS292 4.4 33.0 1.0
CB A:ASP162 4.6 30.1 1.0
CE A:MET157 4.8 43.3 1.0
CA A:ASP162 4.9 29.3 1.0
NH1 A:ARG311 5.0 53.0 1.0

Reference:

A.A.Adeyeye, W.Schubert. Structure of Glutarate Hydroxylase (Glah) From Escherichia Coli at A Resolution of 1.8 Angstrom Obtained As A Contaminant During Routine Use of E. Coli As An Expression Host To Be Published.
Page generated: Thu Jul 27 16:06:26 2023

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