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Iron in PDB 8doc: Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate

Enzymatic activity of Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate

All present enzymatic activity of Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate:
3.1.1.64; 5.3.3.22;

Protein crystallography data

The structure of Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate, PDB code: 8doc was solved by M.Bassetto, P.D.Kiser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.05 / 2.10
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 176.82, 176.82, 86.19, 90, 90, 120
R / Rfree (%) 17.8 / 21.1

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate (pdb code 8doc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate, PDB code: 8doc:

Iron binding site 1 out of 1 in 8doc

Go back to Iron Binding Sites List in 8doc
Iron binding site 1 out of 1 in the Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of RPE65 in Complex with Compound 16E and Palmitate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:37.7
occ:1.00
O1 A:PLM603 2.0 75.0 1.0
NE2 A:HIS313 2.2 31.9 1.0
NE2 A:HIS180 2.2 35.4 1.0
NE2 A:HIS527 2.2 38.0 1.0
NE2 A:HIS241 2.3 37.9 1.0
C1 A:PLM603 2.9 68.1 1.0
CD2 A:HIS313 3.1 34.6 1.0
CD2 A:HIS180 3.1 35.9 1.0
C2 A:PLM603 3.1 65.4 1.0
CD2 A:HIS527 3.1 36.5 1.0
CE1 A:HIS527 3.2 38.5 1.0
CE1 A:HIS313 3.2 32.3 1.0
CE1 A:HIS180 3.2 35.5 1.0
CD2 A:HIS241 3.3 36.3 1.0
CE1 A:HIS241 3.3 39.1 1.0
O2 A:PLM603 4.0 75.7 1.0
ND1 A:HIS527 4.2 35.2 1.0
CG A:HIS527 4.2 35.8 1.0
CG A:HIS313 4.3 34.0 1.0
ND1 A:HIS313 4.3 31.3 1.0
CG A:HIS180 4.3 36.3 1.0
ND1 A:HIS180 4.3 35.2 1.0
ND1 A:HIS241 4.4 37.9 1.0
CG A:HIS241 4.4 37.1 1.0
C3 A:PLM603 4.4 63.6 1.0
CG1 A:VAL134 4.8 39.9 1.0

Reference:

M.Bassetto, M.Bassetto, P.D.Kiser. N/A N/A.
Page generated: Sat Aug 10 00:14:21 2024

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