Iron in PDB 8ec0: III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
Enzymatic activity of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
All present enzymatic activity of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant:
7.1.1.8;
7.1.1.9;
Other elements in 8ec0:
The structure of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Iron atom in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
(pdb code 8ec0). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the
III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant, PDB code: 8ec0:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 1 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe301
b:126.6
occ:1.00
|
FE1
|
C:FES301
|
0.0
|
126.6
|
1.0
|
|
S2
|
C:FES301
|
2.2
|
126.6
|
1.0
|
|
S1
|
C:FES301
|
2.2
|
126.6
|
1.0
|
|
SG
|
C:CYS178
|
2.3
|
112.7
|
1.0
|
|
SG
|
C:CYS159
|
2.4
|
116.3
|
1.0
|
|
ND1
|
C:HIS161
|
2.4
|
118.2
|
1.0
|
|
CB
|
C:HIS161
|
2.5
|
118.2
|
1.0
|
|
CG
|
C:HIS161
|
2.6
|
118.2
|
1.0
|
|
FE2
|
C:FES301
|
2.7
|
126.6
|
1.0
|
|
CB
|
C:CYS178
|
3.1
|
112.7
|
1.0
|
|
OG
|
C:SER183
|
3.1
|
115.3
|
1.0
|
|
CE1
|
C:HIS161
|
3.5
|
118.2
|
1.0
|
|
CD2
|
C:HIS161
|
3.7
|
118.2
|
1.0
|
|
CB
|
C:SER183
|
3.8
|
115.3
|
1.0
|
|
CA
|
C:HIS161
|
3.8
|
118.2
|
1.0
|
|
CB
|
C:CYS159
|
3.8
|
116.3
|
1.0
|
|
N
|
C:LEU162
|
3.9
|
114.7
|
1.0
|
|
NE2
|
C:HIS161
|
4.1
|
118.2
|
1.0
|
|
N
|
C:HIS161
|
4.2
|
118.2
|
1.0
|
|
C
|
C:HIS161
|
4.3
|
118.2
|
1.0
|
|
CA
|
C:CYS178
|
4.5
|
112.7
|
1.0
|
|
N
|
C:SER183
|
4.5
|
115.3
|
1.0
|
|
OH
|
C:TYR185
|
4.6
|
117.9
|
1.0
|
|
N
|
C:HIS181
|
4.7
|
106.3
|
1.0
|
|
SG
|
C:CYS164
|
4.8
|
110.5
|
1.0
|
|
CA
|
C:SER183
|
4.8
|
115.3
|
1.0
|
|
Iron binding site 2 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 2 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe301
b:126.6
occ:1.00
|
FE2
|
C:FES301
|
0.0
|
126.6
|
1.0
|
|
S1
|
C:FES301
|
2.2
|
126.6
|
1.0
|
|
S2
|
C:FES301
|
2.2
|
126.6
|
1.0
|
|
CE1
|
C:HIS161
|
2.2
|
118.2
|
1.0
|
|
ND1
|
C:HIS161
|
2.3
|
118.2
|
1.0
|
|
N
|
C:HIS181
|
2.3
|
106.3
|
1.0
|
|
SG
|
C:CYS178
|
2.3
|
112.7
|
1.0
|
|
ND1
|
C:HIS181
|
2.6
|
106.3
|
1.0
|
|
FE1
|
C:FES301
|
2.7
|
126.6
|
1.0
|
|
CA
|
C:HIS181
|
3.0
|
106.3
|
1.0
|
|
CB
|
C:HIS181
|
3.1
|
106.3
|
1.0
|
|
CB
|
C:CYS180
|
3.2
|
109.5
|
1.0
|
|
C
|
C:CYS180
|
3.2
|
109.5
|
1.0
|
|
CG
|
C:HIS181
|
3.2
|
106.3
|
1.0
|
|
NE2
|
C:HIS161
|
3.2
|
118.2
|
1.0
|
|
CG
|
C:HIS161
|
3.3
|
118.2
|
1.0
|
|
C
|
C:HIS181
|
3.6
|
106.3
|
1.0
|
|
CA
|
C:CYS180
|
3.6
|
109.5
|
1.0
|
|
CB
|
C:CYS178
|
3.7
|
112.7
|
1.0
|
|
CD2
|
C:HIS161
|
3.8
|
118.2
|
1.0
|
|
CE1
|
C:HIS181
|
3.8
|
106.3
|
1.0
|
|
N
|
C:GLY182
|
3.9
|
113.3
|
1.0
|
|
N
|
C:CYS180
|
4.1
|
109.5
|
1.0
|
|
O
|
C:CYS180
|
4.2
|
109.5
|
1.0
|
|
CB
|
C:HIS161
|
4.3
|
118.2
|
1.0
|
|
O
|
C:HIS181
|
4.4
|
106.3
|
1.0
|
|
CD2
|
C:HIS181
|
4.5
|
106.3
|
1.0
|
|
SG
|
C:CYS164
|
4.6
|
110.5
|
1.0
|
|
SG
|
C:CYS180
|
4.6
|
109.5
|
1.0
|
|
O
|
C:CYS178
|
4.7
|
112.7
|
1.0
|
|
OG
|
C:SER183
|
4.7
|
115.3
|
1.0
|
|
NE2
|
C:HIS181
|
4.8
|
106.3
|
1.0
|
|
SG
|
C:CYS159
|
4.9
|
116.3
|
1.0
|
|
C
|
C:CYS178
|
4.9
|
112.7
|
1.0
|
|
CA
|
C:CYS178
|
4.9
|
112.7
|
1.0
|
|
N
|
C:SER183
|
5.0
|
115.3
|
1.0
|
|
Iron binding site 3 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 3 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Fe403
b:47.2
occ:1.00
|
FE
|
J:HEM403
|
0.0
|
47.2
|
1.0
|
|
NB
|
J:HEM403
|
1.9
|
47.2
|
1.0
|
|
NA
|
J:HEM403
|
1.9
|
47.2
|
1.0
|
|
NC
|
J:HEM403
|
2.1
|
47.2
|
1.0
|
|
ND
|
J:HEM403
|
2.1
|
47.2
|
1.0
|
|
NE2
|
J:HIS183
|
2.5
|
81.7
|
1.0
|
|
C1B
|
J:HEM403
|
2.9
|
47.2
|
1.0
|
|
C4B
|
J:HEM403
|
2.9
|
47.2
|
1.0
|
|
C4A
|
J:HEM403
|
2.9
|
47.2
|
1.0
|
|
C1A
|
J:HEM403
|
3.0
|
47.2
|
1.0
|
|
C1C
|
J:HEM403
|
3.0
|
47.2
|
1.0
|
|
CE1
|
J:HIS183
|
3.1
|
81.7
|
1.0
|
|
C4D
|
J:HEM403
|
3.1
|
47.2
|
1.0
|
|
C4C
|
J:HEM403
|
3.1
|
47.2
|
1.0
|
|
C1D
|
J:HEM403
|
3.2
|
47.2
|
1.0
|
|
CHB
|
J:HEM403
|
3.3
|
47.2
|
1.0
|
|
CHC
|
J:HEM403
|
3.3
|
47.2
|
1.0
|
|
CHA
|
J:HEM403
|
3.4
|
47.2
|
1.0
|
|
CHD
|
J:HEM403
|
3.5
|
47.2
|
1.0
|
|
CD2
|
J:HIS183
|
3.7
|
81.7
|
1.0
|
|
C2B
|
J:HEM403
|
4.1
|
47.2
|
1.0
|
|
C3B
|
J:HEM403
|
4.1
|
47.2
|
1.0
|
|
C3A
|
J:HEM403
|
4.2
|
47.2
|
1.0
|
|
C2A
|
J:HEM403
|
4.2
|
47.2
|
1.0
|
|
C2C
|
J:HEM403
|
4.3
|
47.2
|
1.0
|
|
C3C
|
J:HEM403
|
4.3
|
47.2
|
1.0
|
|
ND1
|
J:HIS183
|
4.3
|
81.7
|
1.0
|
|
ND1
|
J:HIS82
|
4.3
|
56.6
|
1.0
|
|
C3D
|
J:HEM403
|
4.4
|
47.2
|
1.0
|
|
C2D
|
J:HEM403
|
4.4
|
47.2
|
1.0
|
|
CG
|
J:HIS183
|
4.7
|
81.7
|
1.0
|
|
CE1
|
J:HIS82
|
4.8
|
56.6
|
1.0
|
|
CA
|
J:GLY131
|
4.8
|
92.5
|
1.0
|
|
Iron binding site 4 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 4 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Fe404
b:62.7
occ:1.00
|
FE
|
J:HEM404
|
0.0
|
62.7
|
1.0
|
|
NB
|
J:HEM404
|
1.9
|
62.7
|
1.0
|
|
NA
|
J:HEM404
|
1.9
|
62.7
|
1.0
|
|
NC
|
J:HEM404
|
2.1
|
62.7
|
1.0
|
|
ND
|
J:HEM404
|
2.1
|
62.7
|
1.0
|
|
NE2
|
J:HIS96
|
2.4
|
48.8
|
1.0
|
|
NE2
|
J:HIS197
|
2.5
|
55.7
|
1.0
|
|
CE1
|
J:HIS197
|
2.8
|
55.7
|
1.0
|
|
C1B
|
J:HEM404
|
2.9
|
62.7
|
1.0
|
|
C4B
|
J:HEM404
|
2.9
|
62.7
|
1.0
|
|
C4A
|
J:HEM404
|
2.9
|
62.7
|
1.0
|
|
C1A
|
J:HEM404
|
3.0
|
62.7
|
1.0
|
|
C1C
|
J:HEM404
|
3.0
|
62.7
|
1.0
|
|
CD2
|
J:HIS96
|
3.1
|
48.8
|
1.0
|
|
C4D
|
J:HEM404
|
3.1
|
62.7
|
1.0
|
|
C4C
|
J:HEM404
|
3.2
|
62.7
|
1.0
|
|
C1D
|
J:HEM404
|
3.2
|
62.7
|
1.0
|
|
CHB
|
J:HEM404
|
3.3
|
62.7
|
1.0
|
|
CHC
|
J:HEM404
|
3.3
|
62.7
|
1.0
|
|
CHA
|
J:HEM404
|
3.4
|
62.7
|
1.0
|
|
CHD
|
J:HEM404
|
3.6
|
62.7
|
1.0
|
|
CD2
|
J:HIS197
|
3.6
|
55.7
|
1.0
|
|
CE1
|
J:HIS96
|
3.6
|
48.8
|
1.0
|
|
ND1
|
J:HIS197
|
4.0
|
55.7
|
1.0
|
|
C2B
|
J:HEM404
|
4.1
|
62.7
|
1.0
|
|
C3B
|
J:HEM404
|
4.1
|
62.7
|
1.0
|
|
C3A
|
J:HEM404
|
4.2
|
62.7
|
1.0
|
|
C2A
|
J:HEM404
|
4.2
|
62.7
|
1.0
|
|
C2C
|
J:HEM404
|
4.2
|
62.7
|
1.0
|
|
C3C
|
J:HEM404
|
4.3
|
62.7
|
1.0
|
|
CG
|
J:HIS197
|
4.3
|
55.7
|
1.0
|
|
CG
|
J:HIS96
|
4.3
|
48.8
|
1.0
|
|
C3D
|
J:HEM404
|
4.4
|
62.7
|
1.0
|
|
C2D
|
J:HEM404
|
4.4
|
62.7
|
1.0
|
|
ND1
|
J:HIS96
|
4.6
|
48.8
|
1.0
|
|
Iron binding site 5 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 5 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Fe602
b:121.6
occ:1.00
|
FE
|
K:HEA602
|
0.0
|
121.6
|
1.0
|
|
ND
|
K:HEA602
|
1.9
|
121.6
|
1.0
|
|
NB
|
K:HEA602
|
2.0
|
121.6
|
1.0
|
|
NA
|
K:HEA602
|
2.0
|
121.6
|
1.0
|
|
NC
|
K:HEA602
|
2.0
|
121.6
|
1.0
|
|
NE2
|
K:HIS378
|
2.3
|
139.3
|
1.0
|
|
NE2
|
K:HIS62
|
2.5
|
140.3
|
1.0
|
|
C4D
|
K:HEA602
|
2.9
|
121.6
|
1.0
|
|
CD2
|
K:HIS378
|
3.0
|
139.3
|
1.0
|
|
C1B
|
K:HEA602
|
3.0
|
121.6
|
1.0
|
|
C1D
|
K:HEA602
|
3.0
|
121.6
|
1.0
|
|
C1A
|
K:HEA602
|
3.0
|
121.6
|
1.0
|
|
C4C
|
K:HEA602
|
3.0
|
121.6
|
1.0
|
|
C4B
|
K:HEA602
|
3.0
|
121.6
|
1.0
|
|
C4A
|
K:HEA602
|
3.1
|
121.6
|
1.0
|
|
C1C
|
K:HEA602
|
3.1
|
121.6
|
1.0
|
|
CHA
|
K:HEA602
|
3.3
|
121.6
|
1.0
|
|
CHD
|
K:HEA602
|
3.3
|
121.6
|
1.0
|
|
CE1
|
K:HIS62
|
3.4
|
140.3
|
1.0
|
|
CHB
|
K:HEA602
|
3.4
|
121.6
|
1.0
|
|
CHC
|
K:HEA602
|
3.4
|
121.6
|
1.0
|
|
CE1
|
K:HIS378
|
3.5
|
139.3
|
1.0
|
|
CD2
|
K:HIS62
|
3.6
|
140.3
|
1.0
|
|
C3D
|
K:HEA602
|
4.2
|
121.6
|
1.0
|
|
CG
|
K:HIS378
|
4.2
|
139.3
|
1.0
|
|
C2B
|
K:HEA602
|
4.2
|
121.6
|
1.0
|
|
C2D
|
K:HEA602
|
4.2
|
121.6
|
1.0
|
|
CE
|
K:MET66
|
4.3
|
132.8
|
1.0
|
|
C2A
|
K:HEA602
|
4.3
|
121.6
|
1.0
|
|
C3C
|
K:HEA602
|
4.3
|
121.6
|
1.0
|
|
C3B
|
K:HEA602
|
4.3
|
121.6
|
1.0
|
|
C3A
|
K:HEA602
|
4.3
|
121.6
|
1.0
|
|
C2C
|
K:HEA602
|
4.3
|
121.6
|
1.0
|
|
ND1
|
K:HIS378
|
4.4
|
139.3
|
1.0
|
|
ND1
|
K:HIS62
|
4.6
|
140.3
|
1.0
|
|
CG
|
K:HIS62
|
4.7
|
140.3
|
1.0
|
|
Iron binding site 6 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 6 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Fe603
b:127.0
occ:1.00
|
FE
|
K:HEA603
|
0.0
|
127.0
|
1.0
|
|
ND
|
K:HEA603
|
1.9
|
127.0
|
1.0
|
|
NB
|
K:HEA603
|
2.0
|
127.0
|
1.0
|
|
NA
|
K:HEA603
|
2.0
|
127.0
|
1.0
|
|
NC
|
K:HEA603
|
2.0
|
127.0
|
1.0
|
|
NE2
|
K:HIS376
|
2.4
|
133.2
|
1.0
|
|
C4D
|
K:HEA603
|
2.9
|
127.0
|
1.0
|
|
C1B
|
K:HEA603
|
3.0
|
127.0
|
1.0
|
|
C1D
|
K:HEA603
|
3.0
|
127.0
|
1.0
|
|
C1A
|
K:HEA603
|
3.0
|
127.0
|
1.0
|
|
C4B
|
K:HEA603
|
3.0
|
127.0
|
1.0
|
|
C4C
|
K:HEA603
|
3.0
|
127.0
|
1.0
|
|
C4A
|
K:HEA603
|
3.1
|
127.0
|
1.0
|
|
C1C
|
K:HEA603
|
3.1
|
127.0
|
1.0
|
|
CHA
|
K:HEA603
|
3.3
|
127.0
|
1.0
|
|
CE1
|
K:HIS376
|
3.3
|
133.2
|
1.0
|
|
CHD
|
K:HEA603
|
3.3
|
127.0
|
1.0
|
|
CHB
|
K:HEA603
|
3.4
|
127.0
|
1.0
|
|
CHC
|
K:HEA603
|
3.4
|
127.0
|
1.0
|
|
CD2
|
K:HIS376
|
3.4
|
133.2
|
1.0
|
|
C3D
|
K:HEA603
|
4.2
|
127.0
|
1.0
|
|
C2B
|
K:HEA603
|
4.2
|
127.0
|
1.0
|
|
C2D
|
K:HEA603
|
4.2
|
127.0
|
1.0
|
|
C2A
|
K:HEA603
|
4.3
|
127.0
|
1.0
|
|
C3B
|
K:HEA603
|
4.3
|
127.0
|
1.0
|
|
C3C
|
K:HEA603
|
4.3
|
127.0
|
1.0
|
|
C3A
|
K:HEA603
|
4.3
|
127.0
|
1.0
|
|
C2C
|
K:HEA603
|
4.3
|
127.0
|
1.0
|
|
CE1
|
K:HIS290
|
4.4
|
135.1
|
1.0
|
|
ND1
|
K:HIS376
|
4.5
|
133.2
|
1.0
|
|
CG
|
K:HIS376
|
4.5
|
133.2
|
1.0
|
|
CA
|
K:GLY355
|
4.6
|
128.8
|
1.0
|
|
Iron binding site 7 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 7 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Fe401
b:67.2
occ:1.00
|
FE
|
L:HEM401
|
0.0
|
67.2
|
1.0
|
|
NB
|
L:HEM401
|
1.9
|
67.2
|
1.0
|
|
NA
|
L:HEM401
|
1.9
|
67.2
|
1.0
|
|
NC
|
L:HEM401
|
2.1
|
67.2
|
1.0
|
|
ND
|
L:HEM401
|
2.1
|
67.2
|
1.0
|
|
NE2
|
L:HIS105
|
2.3
|
67.2
|
1.0
|
|
SD
|
L:MET225
|
2.6
|
71.8
|
1.0
|
|
CE
|
L:MET225
|
2.8
|
71.8
|
1.0
|
|
C4B
|
L:HEM401
|
2.9
|
67.2
|
1.0
|
|
C1B
|
L:HEM401
|
2.9
|
67.2
|
1.0
|
|
C4A
|
L:HEM401
|
2.9
|
67.2
|
1.0
|
|
C1A
|
L:HEM401
|
3.0
|
67.2
|
1.0
|
|
C1C
|
L:HEM401
|
3.0
|
67.2
|
1.0
|
|
C4D
|
L:HEM401
|
3.1
|
67.2
|
1.0
|
|
C4C
|
L:HEM401
|
3.2
|
67.2
|
1.0
|
|
C1D
|
L:HEM401
|
3.2
|
67.2
|
1.0
|
|
CE1
|
L:HIS105
|
3.2
|
67.2
|
1.0
|
|
CHB
|
L:HEM401
|
3.3
|
67.2
|
1.0
|
|
CHC
|
L:HEM401
|
3.3
|
67.2
|
1.0
|
|
CD2
|
L:HIS105
|
3.3
|
67.2
|
1.0
|
|
CHA
|
L:HEM401
|
3.4
|
67.2
|
1.0
|
|
CHD
|
L:HEM401
|
3.5
|
67.2
|
1.0
|
|
C3B
|
L:HEM401
|
4.1
|
67.2
|
1.0
|
|
C2B
|
L:HEM401
|
4.1
|
67.2
|
1.0
|
|
C3A
|
L:HEM401
|
4.1
|
67.2
|
1.0
|
|
C2A
|
L:HEM401
|
4.2
|
67.2
|
1.0
|
|
C2C
|
L:HEM401
|
4.2
|
67.2
|
1.0
|
|
C3C
|
L:HEM401
|
4.3
|
67.2
|
1.0
|
|
CG
|
L:MET225
|
4.3
|
71.8
|
1.0
|
|
ND1
|
L:HIS105
|
4.3
|
67.2
|
1.0
|
|
C3D
|
L:HEM401
|
4.4
|
67.2
|
1.0
|
|
C2D
|
L:HEM401
|
4.4
|
67.2
|
1.0
|
|
CG
|
L:HIS105
|
4.4
|
67.2
|
1.0
|
|
Iron binding site 8 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 8 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
c:Fe301
b:150.8
occ:1.00
|
FE1
|
c:FES301
|
0.0
|
150.8
|
1.0
|
|
S2
|
c:FES301
|
2.2
|
150.8
|
1.0
|
|
S1
|
c:FES301
|
2.2
|
150.8
|
1.0
|
|
ND1
|
c:HIS161
|
2.3
|
137.1
|
1.0
|
|
SG
|
c:CYS178
|
2.4
|
126.5
|
1.0
|
|
SG
|
c:CYS159
|
2.4
|
143.2
|
1.0
|
|
FE2
|
c:FES301
|
2.7
|
150.8
|
1.0
|
|
CB
|
c:HIS161
|
2.7
|
137.1
|
1.0
|
|
CG
|
c:HIS161
|
2.8
|
137.1
|
1.0
|
|
OH
|
c:TYR185
|
2.9
|
127.8
|
1.0
|
|
CB
|
c:CYS178
|
3.2
|
126.5
|
1.0
|
|
CE1
|
c:HIS161
|
3.5
|
137.1
|
1.0
|
|
CZ
|
c:TYR185
|
3.6
|
127.8
|
1.0
|
|
NE2
|
c:HIS181
|
3.8
|
124.4
|
1.0
|
|
CD2
|
c:HIS181
|
3.9
|
124.4
|
1.0
|
|
CB
|
c:CYS159
|
4.0
|
143.2
|
1.0
|
|
CD2
|
c:HIS161
|
4.1
|
137.1
|
1.0
|
|
CA
|
c:HIS161
|
4.2
|
137.1
|
1.0
|
|
CE1
|
c:TYR185
|
4.2
|
127.8
|
1.0
|
|
CE1
|
c:HIS181
|
4.2
|
124.4
|
1.0
|
|
CE2
|
c:TYR185
|
4.3
|
127.8
|
1.0
|
|
N
|
c:LEU162
|
4.3
|
134.1
|
1.0
|
|
NE2
|
c:HIS161
|
4.4
|
137.1
|
1.0
|
|
CG
|
c:HIS181
|
4.4
|
124.4
|
1.0
|
|
O
|
c:CYS164
|
4.5
|
133.2
|
1.0
|
|
ND1
|
c:HIS181
|
4.6
|
124.4
|
1.0
|
|
CA
|
c:CYS178
|
4.6
|
126.5
|
1.0
|
|
C
|
c:HIS161
|
4.7
|
137.1
|
1.0
|
|
N
|
c:HIS161
|
4.7
|
137.1
|
1.0
|
|
CG
|
c:PRO166
|
4.7
|
124.9
|
1.0
|
|
Iron binding site 9 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 9 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
c:Fe301
b:150.8
occ:1.00
|
FE2
|
c:FES301
|
0.0
|
150.8
|
1.0
|
|
CG
|
c:HIS181
|
1.7
|
124.4
|
1.0
|
|
CD2
|
c:HIS181
|
1.7
|
124.4
|
1.0
|
|
ND1
|
c:HIS181
|
2.1
|
124.4
|
1.0
|
|
NE2
|
c:HIS181
|
2.1
|
124.4
|
1.0
|
|
ND1
|
c:HIS161
|
2.2
|
137.1
|
1.0
|
|
S1
|
c:FES301
|
2.2
|
150.8
|
1.0
|
|
S2
|
c:FES301
|
2.2
|
150.8
|
1.0
|
|
CE1
|
c:HIS161
|
2.2
|
137.1
|
1.0
|
|
SG
|
c:CYS178
|
2.3
|
126.5
|
1.0
|
|
CE1
|
c:HIS181
|
2.4
|
124.4
|
1.0
|
|
CB
|
c:HIS181
|
2.7
|
124.4
|
1.0
|
|
FE1
|
c:FES301
|
2.7
|
150.8
|
1.0
|
|
CB
|
c:CYS178
|
3.2
|
126.5
|
1.0
|
|
CG
|
c:HIS161
|
3.3
|
137.1
|
1.0
|
|
NE2
|
c:HIS161
|
3.3
|
137.1
|
1.0
|
|
CD2
|
c:HIS161
|
3.8
|
137.1
|
1.0
|
|
CA
|
c:HIS181
|
4.0
|
124.4
|
1.0
|
|
N
|
c:HIS181
|
4.1
|
124.4
|
1.0
|
|
CB
|
c:HIS161
|
4.2
|
137.1
|
1.0
|
|
CA
|
c:CYS178
|
4.5
|
126.5
|
1.0
|
|
O
|
c:CYS178
|
4.7
|
126.5
|
1.0
|
|
C
|
c:CYS178
|
4.7
|
126.5
|
1.0
|
|
CB
|
c:SER183
|
4.8
|
121.1
|
1.0
|
|
C
|
c:CYS180
|
4.9
|
123.9
|
1.0
|
|
SG
|
c:CYS159
|
4.9
|
143.2
|
1.0
|
|
OG
|
c:SER183
|
5.0
|
121.1
|
1.0
|
|
Iron binding site 10 out
of 12 in 8ec0
Go back to
Iron Binding Sites List in 8ec0
Iron binding site 10 out
of 12 in the III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of III2IV Respiratory Supercomplex From Saccharomyces Cerevisiae Cardiolipin-Lacking Mutant within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
j:Fe403
b:35.7
occ:1.00
|
FE
|
j:HEM403
|
0.0
|
35.7
|
1.0
|
|
NB
|
j:HEM403
|
1.9
|
35.7
|
1.0
|
|
NA
|
j:HEM403
|
1.9
|
35.7
|
1.0
|
|
NC
|
j:HEM403
|
2.1
|
35.7
|
1.0
|
|
NE2
|
j:HIS82
|
2.1
|
63.6
|
1.0
|
|
ND
|
j:HEM403
|
2.1
|
35.7
|
1.0
|
|
NE2
|
j:HIS183
|
2.4
|
95.4
|
1.0
|
|
CE1
|
j:HIS183
|
2.5
|
95.4
|
1.0
|
|
CE1
|
j:HIS82
|
2.8
|
63.6
|
1.0
|
|
C4B
|
j:HEM403
|
2.9
|
35.7
|
1.0
|
|
C1B
|
j:HEM403
|
2.9
|
35.7
|
1.0
|
|
C4A
|
j:HEM403
|
2.9
|
35.7
|
1.0
|
|
C1A
|
j:HEM403
|
3.0
|
35.7
|
1.0
|
|
C1C
|
j:HEM403
|
3.0
|
35.7
|
1.0
|
|
C4D
|
j:HEM403
|
3.1
|
35.7
|
1.0
|
|
C4C
|
j:HEM403
|
3.2
|
35.7
|
1.0
|
|
C1D
|
j:HEM403
|
3.2
|
35.7
|
1.0
|
|
CD2
|
j:HIS82
|
3.3
|
63.6
|
1.0
|
|
CHB
|
j:HEM403
|
3.3
|
35.7
|
1.0
|
|
CHC
|
j:HEM403
|
3.3
|
35.7
|
1.0
|
|
CHA
|
j:HEM403
|
3.4
|
35.7
|
1.0
|
|
CHD
|
j:HEM403
|
3.6
|
35.7
|
1.0
|
|
CD2
|
j:HIS183
|
3.8
|
95.4
|
1.0
|
|
ND1
|
j:HIS183
|
3.8
|
95.4
|
1.0
|
|
ND1
|
j:HIS82
|
4.0
|
63.6
|
1.0
|
|
C3B
|
j:HEM403
|
4.1
|
35.7
|
1.0
|
|
C2B
|
j:HEM403
|
4.1
|
35.7
|
1.0
|
|
C3A
|
j:HEM403
|
4.2
|
35.7
|
1.0
|
|
C2A
|
j:HEM403
|
4.2
|
35.7
|
1.0
|
|
C2C
|
j:HEM403
|
4.3
|
35.7
|
1.0
|
|
CG
|
j:HIS82
|
4.3
|
63.6
|
1.0
|
|
C3C
|
j:HEM403
|
4.3
|
35.7
|
1.0
|
|
C3D
|
j:HEM403
|
4.4
|
35.7
|
1.0
|
|
C2D
|
j:HEM403
|
4.4
|
35.7
|
1.0
|
|
CG
|
j:HIS183
|
4.5
|
95.4
|
1.0
|
|
Reference:
C.F.Hryc,
V.K.P.S.Mallampalli,
E.I.Bovshik,
S.Azinas,
G.Fan,
I.I.Serysheva,
G.C.Sparagna,
M.L.Baker,
E.Mileykovskaya,
W.Dowhan.
Structural Insights Into Cardiolipin Replacement By Phosphatidylglycerol in A Cardiolipin-Lacking Yeast Respiratory Supercomplex. Nat Commun V. 14 2783 2023.
ISSN: ESSN 2041-1723
PubMed: 37188665
DOI: 10.1038/S41467-023-38441-5
Page generated: Sat Aug 10 01:15:17 2024
|
