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Iron in PDB 8eun: Microed Structure of An Aeropyrum Pernix Protoglobin Metallo-Carbene Complex

Iron Binding Sites:

The binding sites of Iron atom in the Microed Structure of An Aeropyrum Pernix Protoglobin Metallo-Carbene Complex (pdb code 8eun). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Microed Structure of An Aeropyrum Pernix Protoglobin Metallo-Carbene Complex, PDB code: 8eun:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8eun

Go back to Iron Binding Sites List in 8eun
Iron binding site 1 out of 2 in the Microed Structure of An Aeropyrum Pernix Protoglobin Metallo-Carbene Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Microed Structure of An Aeropyrum Pernix Protoglobin Metallo-Carbene Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:15.7
occ:1.00
FE A:WUF201 0.0 15.7 1.0
C01 A:WUF201 1.8 22.9 1.0
ND A:WUF201 1.9 13.9 1.0
NC A:WUF201 2.0 14.9 1.0
NE2 A:HIS120 2.1 12.4 1.0
NA A:WUF201 2.1 18.2 1.0
NB A:WUF201 2.1 18.3 1.0
C1D A:WUF201 2.8 15.9 1.0
C4C A:WUF201 2.8 14.5 1.0
CD2 A:HIS120 2.9 12.6 1.0
C02 A:WUF201 3.0 19.2 1.0
C4A A:WUF201 3.0 14.4 1.0
C1C A:WUF201 3.1 17.3 1.0
C1B A:WUF201 3.1 13.8 1.0
C4D A:WUF201 3.1 16.2 1.0
CHD A:WUF201 3.1 17.4 1.0
C4B A:WUF201 3.2 21.5 1.0
CE1 A:HIS120 3.2 11.4 1.0
C1A A:WUF201 3.2 13.7 1.0
CHB A:WUF201 3.4 15.3 1.0
CHC A:WUF201 3.5 22.7 1.0
CHA A:WUF201 3.6 12.7 1.0
C03 A:WUF201 3.6 24.5 1.0
C07 A:WUF201 3.9 25.8 1.0
C2D A:WUF201 4.1 17.4 1.0
C3C A:WUF201 4.1 17.6 1.0
CG A:HIS120 4.1 7.5 1.0
C2C A:WUF201 4.2 21.8 1.0
ND1 A:HIS120 4.2 12.8 1.0
C3D A:WUF201 4.2 16.1 1.0
C3A A:WUF201 4.3 12.3 1.0
C2B A:WUF201 4.3 14.1 1.0
C3B A:WUF201 4.4 20.3 1.0
C2A A:WUF201 4.4 12.0 1.0
C04 A:WUF201 4.9 33.0 1.0

Iron binding site 2 out of 2 in 8eun

Go back to Iron Binding Sites List in 8eun
Iron binding site 2 out of 2 in the Microed Structure of An Aeropyrum Pernix Protoglobin Metallo-Carbene Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Microed Structure of An Aeropyrum Pernix Protoglobin Metallo-Carbene Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:12.8
occ:1.00
FE B:WUF201 0.0 12.8 1.0
C01 B:WUF201 1.8 25.2 1.0
ND B:WUF201 1.9 11.4 1.0
NC B:WUF201 2.0 14.8 1.0
NE2 B:HIS120 2.1 10.1 1.0
NA B:WUF201 2.1 18.8 1.0
NB B:WUF201 2.1 15.2 1.0
C1D B:WUF201 2.8 17.8 1.0
C4C B:WUF201 2.8 13.0 1.0
CD2 B:HIS120 2.9 10.0 1.0
C02 B:WUF201 3.0 18.1 1.0
C4A B:WUF201 3.0 14.3 1.0
C1C B:WUF201 3.1 15.8 1.0
C1B B:WUF201 3.1 13.8 1.0
C4D B:WUF201 3.1 12.3 1.0
CHD B:WUF201 3.1 15.7 1.0
CE1 B:HIS120 3.2 8.3 1.0
C4B B:WUF201 3.2 18.8 1.0
C1A B:WUF201 3.2 17.3 1.0
CHB B:WUF201 3.4 12.0 1.0
CHC B:WUF201 3.5 18.2 1.0
CHA B:WUF201 3.6 15.3 1.0
C03 B:WUF201 3.6 22.1 1.0
C07 B:WUF201 3.9 24.7 1.0
C2D B:WUF201 4.1 19.7 1.0
CG B:HIS120 4.1 8.2 1.0
C3C B:WUF201 4.1 14.8 1.0
C2C B:WUF201 4.2 17.7 1.0
ND1 B:HIS120 4.2 7.1 1.0
C3D B:WUF201 4.2 17.1 1.0
C3A B:WUF201 4.3 14.6 1.0
C2B B:WUF201 4.3 16.0 1.0
C3B B:WUF201 4.4 16.9 1.0
C2A B:WUF201 4.4 13.3 1.0
CZ3 B:TRP185 4.7 7.7 1.0
CH2 B:TRP185 4.8 9.9 1.0
C04 B:WUF201 4.9 31.9 1.0

Reference:

E.Danelius, N.J.Porter, J.Unge, F.H.Arnold, T.Gonen. Microed Structure of A Protoglobin Reactive Carbene Intermediate. J.Am.Chem.Soc. 2023.
ISSN: ESSN 1520-5126
PubMed: 36948184
DOI: 10.1021/JACS.2C12004
Page generated: Sat Aug 10 02:25:26 2024

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