Iron in PDB 8f6t: Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila

All present enzymatic activity of Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila:
1.14.15.3;

The binding sites of Iron atom in the Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila (pdb code 8f6t). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila, PDB code: 8f6t:
Jump to Iron binding site number: 1; 2; 3;

Iron binding site 1 out of 3 in the Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe501 b:98.8 occ:1.00 NE2 A:HIS272 2.2 88.7 1.0 NE2 A:HIS311 2.2 93.0 1.0 OE1 A:GLU271 2.3 91.3 1.0 NE2 A:HIS315 2.4 92.5 1.0 NE2 A:HIS171 2.5 93.3 1.0 CD2 A:HIS315 2.8 92.5 1.0 CE1 A:HIS272 3.1 88.7 1.0 CE1 A:HIS311 3.1 93.0 1.0 CD2 A:HIS272 3.2 88.7 1.0 CD2 A:HIS311 3.3 93.0 1.0 CE1 A:HIS171 3.3 93.3 1.0 CE1 A:HIS315 3.3 92.5 1.0 CD A:GLU271 3.5 91.3 1.0 CD2 A:HIS171 3.6 93.3 1.0 CG A:HIS315 3.8 92.5 1.0 ND1 A:HIS315 4.1 92.5 1.0 OE2 A:GLU271 4.1 91.3 1.0 ND1 A:HIS272 4.2 88.7 1.0 ND1 A:HIS311 4.2 93.0 1.0 CG A:HIS272 4.3 88.7 1.0 CG A:HIS311 4.3 93.0 1.0 CB A:GLU271 4.4 91.3 1.0 ND1 A:HIS171 4.5 93.3 1.0 CG A:GLU271 4.6 91.3 1.0 CG A:HIS171 4.6 93.3 1.0 C1 A:D12504 4.8 88.8 1.0 CE1 A:HIS167 4.9 91.9 1.0

Iron binding site 2 out of 3 in the Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe502 b:100.1 occ:1.00 NE2 A:HIS167 2.1 91.9 1.0 NE2 A:HIS314 2.2 93.3 1.0 NE2 A:HIS141 2.2 94.5 1.0 NE2 A:HIS172 2.2 92.0 1.0 NE2 A:HIS137 2.3 92.2 1.0 CE1 A:HIS314 2.5 93.3 1.0 CE1 A:HIS141 3.0 94.5 1.0 CE1 A:HIS167 3.0 91.9 1.0 CE1 A:HIS172 3.0 92.0 1.0 CD2 A:HIS137 3.1 92.2 1.0 CD2 A:HIS167 3.2 91.9 1.0 CD2 A:HIS141 3.3 94.5 1.0 CE1 A:HIS137 3.3 92.2 1.0 CD2 A:HIS172 3.3 92.0 1.0 CD2 A:HIS314 3.5 93.3 1.0 ND1 A:HIS314 3.8 93.3 1.0 ND1 A:HIS141 4.1 94.5 1.0 ND1 A:HIS167 4.2 91.9 1.0 ND1 A:HIS172 4.2 92.0 1.0 CG A:HIS167 4.3 91.9 1.0 CG A:HIS314 4.3 93.3 1.0 CG A:HIS137 4.3 92.2 1.0 CG A:HIS141 4.3 94.5 1.0 ND1 A:HIS137 4.4 92.2 1.0 CG A:HIS172 4.4 92.0 1.0 CD2 A:HIS315 4.9 92.5 1.0 CE1 A:HIS311 4.9 93.0 1.0

Iron binding site 3 out of 3 in the Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of Alkane 1-Monooxygenase Alkb-Alkg Complex From Fontimonas Thermophila within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe503 b:138.6 occ:1.00 SG A:CYS421 2.3 127.8 1.0 SG A:CYS454 2.3 121.0 1.0 SG A:CYS418 2.3 125.1 1.0 SG A:CYS451 2.3 124.7 1.0 CB A:CYS451 2.9 124.7 1.0 CB A:CYS418 3.1 125.1 1.0 CB A:CYS421 3.6 127.8 1.0 CB A:CYS454 3.8 121.0 1.0 N A:CYS421 3.9 127.8 1.0 N A:CYS454 4.3 121.0 1.0 CA A:CYS421 4.3 127.8 1.0 CA A:CYS451 4.4 124.7 1.0 CA A:CYS418 4.6 125.1 1.0 CA A:CYS454 4.6 121.0 1.0 CB A:ASP420 4.6 123.5 1.0 C A:CYS451 4.9 124.7 1.0 CB A:ARG457 4.9 115.6 1.0 CB A:TYR423 4.9 125.0 1.0 C A:ASP420 4.9 123.5 1.0 O A:CYS451 5.0 124.7 1.0 N A:ASP420 5.0 123.5 1.0 N A:ALA455 5.0 114.9 1.0

J.Chai, G.Guo, S.M.Mcsweeney, J.Shanklin, Q.Liu. Structural Basis For Enzymatic Terminal C-H Bond Functionalization of Alkanes Nat.Struct.Mol.Biol. 2023.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-023-00958-0