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Iron in PDB 8gly: Crystal Structure of T252E-CYP199A4 in Complex with 4-Hydroxybenzoic Acid

Protein crystallography data

The structure of Crystal Structure of T252E-CYP199A4 in Complex with 4-Hydroxybenzoic Acid, PDB code: 8gly was solved by J.H.Z.Lee, J.B.Bruning, S.G.Bell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.31 / 2.03
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.192, 51.697, 79.359, 90, 92.16, 90
R / Rfree (%) 16.9 / 22.6

Other elements in 8gly:

The structure of Crystal Structure of T252E-CYP199A4 in Complex with 4-Hydroxybenzoic Acid also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of T252E-CYP199A4 in Complex with 4-Hydroxybenzoic Acid (pdb code 8gly). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of T252E-CYP199A4 in Complex with 4-Hydroxybenzoic Acid, PDB code: 8gly:

Iron binding site 1 out of 1 in 8gly

Go back to Iron Binding Sites List in 8gly
Iron binding site 1 out of 1 in the Crystal Structure of T252E-CYP199A4 in Complex with 4-Hydroxybenzoic Acid


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of T252E-CYP199A4 in Complex with 4-Hydroxybenzoic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:15.4
occ:1.00
FE A:HEM501 0.0 15.4 1.0
NC A:HEM501 2.0 17.9 1.0
ND A:HEM501 2.0 15.0 1.0
O A:HOH610 2.0 19.7 1.0
NA A:HEM501 2.1 15.8 1.0
NB A:HEM501 2.1 15.1 1.0
SG A:CYS358 2.2 15.2 1.0
C4C A:HEM501 3.0 16.6 1.0
C1D A:HEM501 3.0 14.7 1.0
C1C A:HEM501 3.0 14.9 1.0
C4D A:HEM501 3.1 13.4 1.0
C4B A:HEM501 3.1 16.5 1.0
C4A A:HEM501 3.1 18.0 1.0
C1A A:HEM501 3.1 16.2 1.0
C1B A:HEM501 3.1 16.6 1.0
CB A:CYS358 3.3 15.9 1.0
CHD A:HEM501 3.4 13.3 1.0
CHC A:HEM501 3.4 13.4 1.0
CHA A:HEM501 3.5 14.7 1.0
CHB A:HEM501 3.5 17.4 1.0
CA A:CYS358 4.0 14.7 1.0
C3C A:HEM501 4.2 15.6 1.0
C2C A:HEM501 4.2 15.0 1.0
C2D A:HEM501 4.2 14.1 1.0
C3D A:HEM501 4.3 15.0 1.0
OE1 A:GLU252 4.3 22.3 1.0
C3A A:HEM501 4.3 15.4 1.0
C3B A:HEM501 4.3 14.0 1.0
C2A A:HEM501 4.3 14.7 1.0
C2B A:HEM501 4.3 16.5 1.0
C A:CYS358 4.7 14.2 1.0
CB A:ALA248 4.7 17.3 1.0
O4 A:PHB502 4.8 19.5 1.0
N A:GLY360 4.9 15.1 1.0
N A:VAL359 5.0 15.3 1.0

Reference:

J.H.Z.Lee, J.B.Bruning, S.G.Bell. An in Crystallo Reaction with An Engineered Cytochrome P450 Peroxygenase. Chemistry 03335 2023.
ISSN: ISSN 0947-6539
PubMed: 37971151
DOI: 10.1002/CHEM.202303335
Page generated: Sat Aug 10 04:52:21 2024

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