Atomistry » Iron » PDB 8gbt-8hbe » 8go3
Atomistry »
  Iron »
    PDB 8gbt-8hbe »
      8go3 »

Iron in PDB 8go3: Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent

Enzymatic activity of Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent

All present enzymatic activity of Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent:
7.1.1.3;

Other elements in 8go3:

The structure of Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent also contains other interesting chemical elements:

Copper (Cu) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent (pdb code 8go3). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent, PDB code: 8go3:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8go3

Go back to Iron Binding Sites List in 8go3
Iron binding site 1 out of 2 in the Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe701

b:60.5
occ:1.00
FE A:HEM701 0.0 60.5 1.0
ND A:HEM701 1.9 60.5 1.0
NA A:HEM701 2.0 60.5 1.0
NC A:HEM701 2.1 60.5 1.0
NB A:HEM701 2.1 60.5 1.0
NE2 A:HIS421 2.2 60.8 1.0
NE2 A:HIS106 2.3 59.2 1.0
C4D A:HEM701 2.8 60.5 1.0
C1D A:HEM701 2.9 60.5 1.0
C1A A:HEM701 2.9 60.5 1.0
C4C A:HEM701 3.0 60.5 1.0
C4A A:HEM701 3.0 60.5 1.0
C4B A:HEM701 3.1 60.5 1.0
C1B A:HEM701 3.1 60.5 1.0
C1C A:HEM701 3.1 60.5 1.0
CD2 A:HIS421 3.1 60.8 1.0
CD2 A:HIS106 3.1 59.2 1.0
CE1 A:HIS421 3.2 60.8 1.0
CHA A:HEM701 3.3 60.5 1.0
CHD A:HEM701 3.4 60.5 1.0
CE1 A:HIS106 3.4 59.2 1.0
CHB A:HEM701 3.5 60.5 1.0
CHC A:HEM701 3.5 60.5 1.0
C3D A:HEM701 4.1 60.5 1.0
C2D A:HEM701 4.1 60.5 1.0
C2A A:HEM701 4.1 60.5 1.0
C3A A:HEM701 4.2 60.5 1.0
C3C A:HEM701 4.2 60.5 1.0
C2C A:HEM701 4.3 60.5 1.0
C2B A:HEM701 4.3 60.5 1.0
CG A:HIS421 4.3 60.8 1.0
C3B A:HEM701 4.3 60.5 1.0
ND1 A:HIS421 4.3 60.8 1.0
CG A:HIS106 4.4 59.2 1.0
ND1 A:HIS106 4.4 59.2 1.0

Iron binding site 2 out of 2 in 8go3

Go back to Iron Binding Sites List in 8go3
Iron binding site 2 out of 2 in the Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe702

b:64.3
occ:1.00
FE A:HEO702 0.0 64.3 1.0
NA A:HEO702 1.9 64.3 1.0
ND A:HEO702 2.0 64.3 1.0
NB A:HEO702 2.0 64.3 1.0
NC A:HEO702 2.0 64.3 1.0
NE2 A:HIS419 2.0 61.7 1.0
CD2 A:HIS419 2.9 61.7 1.0
C1A A:HEO702 3.0 64.3 1.0
C4D A:HEO702 3.0 64.3 1.0
C4A A:HEO702 3.0 64.3 1.0
C1B A:HEO702 3.0 64.3 1.0
C4B A:HEO702 3.0 64.3 1.0
C1C A:HEO702 3.0 64.3 1.0
C1D A:HEO702 3.0 64.3 1.0
C4C A:HEO702 3.0 64.3 1.0
CE1 A:HIS419 3.1 61.7 1.0
CHA A:HEO702 3.3 64.3 1.0
CHC A:HEO702 3.4 64.3 1.0
CHB A:HEO702 3.4 64.3 1.0
CHD A:HEO702 3.4 64.3 1.0
CG A:HIS419 4.1 61.7 1.0
ND1 A:HIS419 4.1 61.7 1.0
C2A A:HEO702 4.2 64.3 1.0
C3B A:HEO702 4.2 64.3 1.0
C3A A:HEO702 4.2 64.3 1.0
C3D A:HEO702 4.2 64.3 1.0
C2B A:HEO702 4.2 64.3 1.0
C2D A:HEO702 4.2 64.3 1.0
C2C A:HEO702 4.3 64.3 1.0
C3C A:HEO702 4.3 64.3 1.0
CU A:CU703 4.7 82.7 1.0
CB A:PHE420 4.8 60.5 1.0
CG2 A:VAL423 5.0 61.3 1.0

Reference:

H.Y.Cao, K.Li, C.Y.Li. Cryo-Em Structure of Escherichia Coli Cytochrome BO3 in Ddm Detergent To Be Published.
Page generated: Sat Aug 10 04:57:01 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy