Iron in PDB 8gz3: Structure of Human Phagocyte Nadph Oxidase in the Resting State

The binding sites of Iron atom in the Structure of Human Phagocyte Nadph Oxidase in the Resting State (pdb code 8gz3). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Human Phagocyte Nadph Oxidase in the Resting State, PDB code: 8gz3:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Resting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Human Phagocyte Nadph Oxidase in the Resting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe602 b:58.3 occ:1.00 FE B:HEM602 0.0 58.3 1.0 ND B:HEM602 1.9 41.4 1.0 NA B:HEM602 2.0 47.6 1.0 NE2 B:HIS115 2.1 38.6 1.0 NC B:HEM602 2.1 45.6 1.0 NB B:HEM602 2.1 43.3 1.0 NE2 B:HIS222 2.1 39.0 1.0 C4D B:HEM602 2.9 41.9 1.0 C1D B:HEM602 2.9 40.7 1.0 CD2 B:HIS222 2.9 42.6 1.0 C1A B:HEM602 3.0 46.9 1.0 CE1 B:HIS115 3.0 38.1 1.0 C4C B:HEM602 3.1 44.0 1.0 C4A B:HEM602 3.1 42.8 1.0 CD2 B:HIS115 3.1 38.6 1.0 C1B B:HEM602 3.1 44.0 1.0 C4B B:HEM602 3.1 46.1 1.0 C1C B:HEM602 3.1 42.7 1.0 CE1 B:HIS222 3.3 37.7 1.0 CHA B:HEM602 3.3 46.5 1.0 CHD B:HEM602 3.4 42.6 1.0 CHB B:HEM602 3.5 44.3 1.0 CHC B:HEM602 3.5 45.9 1.0 ND1 B:HIS115 4.0 33.5 1.0 C3D B:HEM602 4.1 44.7 1.0 CG B:HIS115 4.1 30.8 1.0 C2D B:HEM602 4.1 41.0 1.0 CG B:HIS222 4.1 39.6 1.0 C2A B:HEM602 4.1 46.2 1.0 C3A B:HEM602 4.2 41.7 1.0 ND1 B:HIS222 4.3 39.8 1.0 C3C B:HEM602 4.3 40.6 1.0 C2C B:HEM602 4.3 39.2 1.0 C2B B:HEM602 4.3 42.4 1.0 C3B B:HEM602 4.4 45.2 1.0 CD2 B:HIS119 4.7 41.3 1.0 NE2 B:HIS119 4.9 46.5 1.0

Iron binding site 2 out of 2 in the Structure of Human Phagocyte Nadph Oxidase in the Resting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Human Phagocyte Nadph Oxidase in the Resting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe603 b:70.5 occ:1.00 FE B:HEM603 0.0 70.5 1.0 ND B:HEM603 1.9 33.3 1.0 NA B:HEM603 2.0 33.6 1.0 NE2 B:HIS101 2.0 34.2 1.0 NC B:HEM603 2.1 36.8 1.0 NB B:HEM603 2.1 35.1 1.0 NE2 B:HIS209 2.3 33.8 1.0 C4D B:HEM603 2.9 22.8 1.0 CE1 B:HIS101 2.9 32.8 1.0 C1D B:HEM603 2.9 28.9 1.0 C1A B:HEM603 3.0 30.8 1.0 C4C B:HEM603 3.0 30.2 1.0 C4A B:HEM603 3.1 24.2 1.0 CD2 B:HIS101 3.1 34.6 1.0 C1B B:HEM603 3.1 30.3 1.0 C4B B:HEM603 3.1 33.1 1.0 C1C B:HEM603 3.1 35.3 1.0 CE1 B:HIS209 3.3 23.4 1.0 CD2 B:HIS209 3.3 25.0 1.0 CHA B:HEM603 3.3 29.7 1.0 CHD B:HEM603 3.4 30.4 1.0 CHB B:HEM603 3.5 27.1 1.0 CHC B:HEM603 3.5 34.0 1.0 ND1 B:HIS101 4.0 33.6 1.0 C3D B:HEM603 4.1 23.1 1.0 C2D B:HEM603 4.1 22.9 1.0 CG B:HIS101 4.1 31.1 1.0 C2A B:HEM603 4.2 28.6 1.0 C3A B:HEM603 4.2 17.5 1.0 C3C B:HEM603 4.3 29.9 1.0 C2C B:HEM603 4.3 33.0 1.0 C2B B:HEM603 4.3 27.9 1.0 C3B B:HEM603 4.4 29.3 1.0 ND1 B:HIS209 4.4 21.9 1.0 CG B:HIS209 4.5 15.3 1.0 CG1 B:VAL71 4.9 40.3 1.0

R.Liu, K.Song, J.X.Wu, X.P.Geng, L.Zheng, X.Gao, H.Peng, L.Chen. Structure of Human Phagocyte Nadph Oxidase in the Resting State. Elife V. 11 2022.
ISSN: ESSN 2050-084X
PubMed: 36413210
DOI: 10.7554/ELIFE.83743