Iron in PDB 8hct: Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin

All present enzymatic activity of Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin:
1.16.3.1;

The structure of Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin, PDB code: 8hct was solved by T.H.Ming, X.R.Su, C.H.Huo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	106.78 / 2.26
Space group	I 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	151.011, 151.011, 151.011, 90, 90, 90
R / Rfree (%)	16.4 / 22.6

The structure of Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin also contains other interesting chemical elements:

Copper

(Cu)

5 atoms

The binding sites of Iron atom in the Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin (pdb code 8hct). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin, PDB code: 8hct:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:30.9 occ:1.00 OE1 A:GLU58 2.0 23.8 1.0 OE1 A:GLU23 2.0 29.9 1.0 ND1 A:HIS61 2.2 41.1 1.0 O A:HOH311 2.2 28.5 1.0 O A:HOH326 2.3 31.7 1.0 CD A:GLU23 2.9 27.0 1.0 CD A:GLU58 2.9 27.6 1.0 CG A:HIS61 3.1 34.4 1.0 CE1 A:HIS61 3.2 38.1 1.0 OE2 A:GLU23 3.2 23.9 1.0 OE2 A:GLU58 3.3 36.9 1.0 CB A:HIS61 3.3 32.6 1.0 OE1 A:GLN137 3.9 41.6 1.0 O A:HOH389 4.1 33.3 1.0 CG1 A:VAL106 4.1 28.9 1.0 CG A:GLU23 4.2 24.8 1.0 CD2 A:HIS61 4.2 41.5 1.0 NE2 A:HIS61 4.2 41.1 1.0 CG A:GLU58 4.3 25.9 1.0 CA A:GLU58 4.3 25.1 1.0 FE A:FE202 4.5 114.3 1.0 CB A:GLU58 4.5 24.4 1.0 CB A:GLU23 4.6 23.0 1.0 O A:GLU58 4.8 23.3 1.0 CA A:HIS61 4.9 27.2 1.0 CA A:GLU23 4.9 26.0 1.0

Iron binding site 2 out of 2 in the Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of CU2+ Binding to Dendrorhynchus Zhejiangensis Ferritin within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe202 b:114.3 occ:1.00 O A:HOH417 2.8 48.6 1.0 OE1 A:GLU103 3.1 35.9 1.0 OE2 A:GLU58 3.1 36.9 1.0 OE1 A:GLU136 3.2 70.8 1.0 OE2 A:GLU103 3.2 36.2 1.0 O A:HOH311 3.3 28.5 1.0 CD A:GLU103 3.5 34.0 1.0 CE1 A:HIS61 3.6 38.1 1.0 OE1 A:GLN137 3.7 41.6 1.0 CB A:ALA140 3.8 23.3 1.0 OE2 A:GLU136 3.8 62.0 1.0 CD A:GLU136 3.9 65.0 1.0 CD A:GLU58 4.1 27.6 1.0 ND1 A:HIS61 4.3 41.1 1.0 CD A:GLN137 4.4 34.2 1.0 FE A:FE201 4.5 30.9 1.0 NE2 A:GLN137 4.6 30.6 1.0 OE1 A:GLU58 4.7 23.8 1.0 NE2 A:HIS61 4.7 41.1 1.0 O A:HOH389 4.7 33.3 1.0 CG A:GLU103 4.9 31.1 1.0

C.Huo, T.Ming, Y.Wu, H.Huan, X.Qiu, C.Lu, Y.Li, Z.Zhang, J.Han, X.Su. Structural and Biochemical Characterization of Silver/Copper Binding By Dendrorhynchus Zhejiangensis Ferritin. Polymers (Basel) V. 15 2023.
ISSN: ISSN 2073-4360
PubMed: 36904538
DOI: 10.3390/POLYM15051297