Iron in PDB 8hiv: The Structure of Apo-Sobcmb with Fe(II) and Akg

Protein crystallography data

The structure of The Structure of Apo-Sobcmb with Fe(II) and Akg, PDB code: 8hiv was solved by L.Wu, J.H.Zhou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.78 / 2.20
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.677, 101.677, 130.922, 90, 90, 120
R / Rfree (%) 18.7 / 22.1

Iron Binding Sites:

The binding sites of Iron atom in the The Structure of Apo-Sobcmb with Fe(II) and Akg (pdb code 8hiv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Structure of Apo-Sobcmb with Fe(II) and Akg, PDB code: 8hiv:

Iron binding site 1 out of 1 in 8hiv

Go back to Iron Binding Sites List in 8hiv
Iron binding site 1 out of 1 in the The Structure of Apo-Sobcmb with Fe(II) and Akg


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Structure of Apo-Sobcmb with Fe(II) and Akg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe403

b:27.4
occ:1.00
NE2 A:HIS256 2.2 27.7 1.0
O1 A:AKG402 2.3 34.0 1.0
O5 A:AKG402 2.3 27.8 1.0
OD1 A:ASP200 2.3 25.6 1.0
O A:HOH523 2.3 29.3 1.0
NE2 A:HIS198 2.3 25.7 1.0
C2 A:AKG402 2.9 32.9 1.0
C1 A:AKG402 2.9 29.4 1.0
CG A:ASP200 3.1 29.1 1.0
CE1 A:HIS256 3.1 25.5 1.0
CD2 A:HIS256 3.2 23.9 1.0
OD2 A:ASP200 3.2 28.0 1.0
CE1 A:HIS198 3.2 26.9 1.0
CD2 A:HIS198 3.4 21.4 1.0
O2 A:AKG402 4.1 39.2 1.0
ND1 A:HIS256 4.2 32.3 1.0
CG A:HIS256 4.3 27.1 1.0
ND1 A:HIS198 4.4 25.5 1.0
C3 A:AKG402 4.4 31.2 1.0
CG A:HIS198 4.5 32.8 1.0
CB A:ASP200 4.5 29.3 1.0
CE2 A:PHE271 4.6 35.3 1.0
CA A:ASP200 4.9 23.9 1.0
C4 A:AKG402 4.9 35.6 1.0
N A:ASP200 4.9 29.1 1.0

Reference:

L.Wu, J.H.Zhou. The Structure of Apo-Sobcmb with Fe(II) and Akg To Be Published.
Page generated: Thu Jul 27 17:20:09 2023

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