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Iron in PDB 8hou: Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe

Enzymatic activity of Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe

All present enzymatic activity of Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe:
1.14.14.1; 1.6.2.4;

Protein crystallography data

The structure of Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe, PDB code: 8hou was solved by Y.Jiang, S.Dong, Y.Feng, Z.Cong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 57.70 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 58.592, 147.608, 64.764, 90, 100.03, 90
R / Rfree (%) 18.7 / 20.9

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe (pdb code 8hou). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe, PDB code: 8hou:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8hou

Go back to Iron Binding Sites List in 8hou
Iron binding site 1 out of 2 in the Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:17.4
occ:1.00
FE A:HEM501 0.0 17.4 1.0
ND A:HEM501 2.0 14.3 1.0
NC A:HEM501 2.0 15.6 1.0
NB A:HEM501 2.0 15.1 1.0
NA A:HEM501 2.0 15.3 1.0
O A:HOH628 2.3 19.1 1.0
SG A:CYS400 2.5 16.1 1.0
C1D A:HEM501 3.0 18.2 1.0
C4C A:HEM501 3.0 15.4 1.0
C1B A:HEM501 3.0 16.6 1.0
C4D A:HEM501 3.1 17.4 1.0
C4A A:HEM501 3.1 16.5 1.0
C4B A:HEM501 3.1 14.8 1.0
C1C A:HEM501 3.1 17.0 1.0
C1A A:HEM501 3.1 17.6 1.0
CHD A:HEM501 3.4 17.8 1.0
CHB A:HEM501 3.4 17.1 1.0
CHC A:HEM501 3.4 16.0 1.0
CHA A:HEM501 3.4 16.5 1.0
CB A:CYS400 3.4 13.9 1.0
CA A:CYS400 4.2 14.2 1.0
C2D A:HEM501 4.3 18.3 1.0
C3D A:HEM501 4.3 17.3 1.0
C2B A:HEM501 4.3 15.4 1.0
C3C A:HEM501 4.3 14.7 1.0
C3A A:HEM501 4.3 12.8 1.0
C2C A:HEM501 4.3 18.2 1.0
C3B A:HEM501 4.3 14.3 1.0
C2A A:HEM501 4.3 15.3 1.0
N32 C:LXO1 4.3 21.7 1.0
O A:ALA264 4.5 21.6 1.0
C31 C:LXO1 4.8 21.5 1.0
N A:GLY402 4.9 18.2 1.0
C A:CYS400 4.9 16.0 1.0

Iron binding site 2 out of 2 in 8hou

Go back to Iron Binding Sites List in 8hou
Iron binding site 2 out of 2 in the Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe501

b:17.1
occ:1.00
FE B:HEM501 0.0 17.1 1.0
NB B:HEM501 2.0 15.2 1.0
ND B:HEM501 2.0 16.3 1.0
NC B:HEM501 2.0 15.9 1.0
NA B:HEM501 2.0 16.2 1.0
O B:HOH640 2.3 17.9 1.0
SG B:CYS400 2.5 17.3 1.0
C4A B:HEM501 3.0 15.3 1.0
C1B B:HEM501 3.0 17.7 1.0
C1D B:HEM501 3.0 17.1 1.0
C4C B:HEM501 3.0 17.2 1.0
C4B B:HEM501 3.1 15.0 1.0
C1C B:HEM501 3.1 16.2 1.0
C4D B:HEM501 3.1 17.7 1.0
C1A B:HEM501 3.1 18.5 1.0
CHB B:HEM501 3.4 16.9 1.0
CHD B:HEM501 3.4 16.5 1.0
CB B:CYS400 3.4 15.4 1.0
CHC B:HEM501 3.4 15.7 1.0
CHA B:HEM501 3.5 15.6 1.0
CA B:CYS400 4.1 15.2 1.0
C2B B:HEM501 4.3 14.7 1.0
C2D B:HEM501 4.3 16.1 1.0
C3A B:HEM501 4.3 16.1 1.0
C3B B:HEM501 4.3 15.1 1.0
C3C B:HEM501 4.3 16.3 1.0
C3D B:HEM501 4.3 17.9 1.0
C2C B:HEM501 4.3 18.1 1.0
C2A B:HEM501 4.3 17.2 1.0
N32 D:LXO1 4.4 18.9 1.0
O B:ALA264 4.5 22.7 1.0
C31 D:LXO1 4.8 21.3 1.0
N B:GLY402 4.9 17.3 1.0
C B:CYS400 4.9 16.8 1.0

Reference:

Y.Jiang, S.Dong, Y.Feng, Z.Cong. Crystal Structure of the P450 BM3 Heme Domain Mutant F87A-T268V in Complex with Im-N-C4-Phe-Phe To Be Published.
Page generated: Thu Dec 28 06:01:56 2023

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