Iron in PDB 8ohy: Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase

The structure of Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase, PDB code: 8ohy was solved by F.H.Koua, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.67 / 1.95
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	99.88, 99.88, 73.12, 90, 90, 90
R / Rfree (%)	20.4 / 25

The structure of Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Iron atom in the Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase (pdb code 8ohy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase, PDB code: 8ohy:

Iron binding site 1 out of 1 in the Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe402 b:36.3 occ:1.00 FE A:HEM402 0.0 36.3 1.0 NB A:HEM402 2.0 39.4 1.0 NC A:HEM402 2.0 35.2 1.0 ND A:HEM402 2.1 36.3 1.0 NA A:HEM402 2.1 39.7 1.0 NE2 A:HIS222 2.1 37.4 1.0 O A:HOH559 2.8 51.2 1.0 C4B A:HEM402 3.0 39.2 1.0 C1C A:HEM402 3.1 35.2 1.0 C1B A:HEM402 3.1 38.1 1.0 CD2 A:HIS222 3.1 38.0 1.0 C4C A:HEM402 3.1 36.8 1.0 C4D A:HEM402 3.1 37.8 1.0 C4A A:HEM402 3.1 39.4 1.0 C1D A:HEM402 3.1 38.4 1.0 CE1 A:HIS222 3.1 38.1 1.0 C1A A:HEM402 3.1 40.1 1.0 HD2 A:HIS222 3.2 45.6 1.0 HE1 A:HIS222 3.3 45.7 1.0 CHC A:HEM402 3.4 36.2 1.0 CHB A:HEM402 3.4 39.4 1.0 CHA A:HEM402 3.4 38.9 1.0 CHD A:HEM402 3.5 36.3 1.0 HH11 A:ARG239 3.5 46.1 1.0 NH1 A:ARG239 4.0 38.4 1.0 HE2 A:PHE255 4.0 39.8 1.0 HG23 A:THR226 4.0 46.5 1.0 HH12 A:ARG239 4.1 46.1 1.0 ND1 A:HIS222 4.2 35.4 1.0 CG A:HIS222 4.2 38.5 1.0 C3B A:HEM402 4.3 39.6 1.0 C2C A:HEM402 4.3 35.5 1.0 C2B A:HEM402 4.3 38.8 1.0 C3C A:HEM402 4.3 35.1 1.0 C3A A:HEM402 4.3 40.7 1.0 C3D A:HEM402 4.3 40.2 1.0 C2D A:HEM402 4.3 39.3 1.0 C2A A:HEM402 4.3 39.9 1.0 HD2 A:ARG239 4.3 44.0 1.0 HG1 A:THR226 4.3 46.0 1.0 HD3 A:ARG239 4.3 44.0 1.0 HHC A:HEM402 4.4 43.5 1.0 HHB A:HEM402 4.4 47.2 1.0 HHA A:HEM402 4.4 46.6 1.0 HHD A:HEM402 4.4 43.5 1.0 OD1 A:ASP149 4.8 53.5 1.0 CD A:ARG239 4.8 36.7 1.0 CE2 A:PHE255 4.8 33.1 1.0 HD2 A:PHE255 4.8 37.9 1.0 CZ A:ARG239 4.8 40.6 1.0 O A:HOH508 4.8 39.5 1.0 CG2 A:THR226 5.0 38.7 1.0 HD1 A:HIS222 5.0 42.4 1.0

F.H.Koua, F.H.Koua. N/A N/A.