Atomistry » Iron » PDB 8tdw-8uco » 8ucl
Atomistry »
  Iron »
    PDB 8tdw-8uco »
      8ucl »

Iron in PDB 8ucl: Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine

Other elements in 8ucl:

The structure of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine also contains other interesting chemical elements:

Copper (Cu) 3 atoms
Zinc (Zn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine (pdb code 8ucl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine, PDB code: 8ucl:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8ucl

Go back to Iron Binding Sites List in 8ucl
Iron binding site 1 out of 2 in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe602

b:52.3
occ:1.00
FE a:HEA602 0.0 52.3 1.0
NC a:HEA602 1.9 52.3 1.0
NA a:HEA602 1.9 52.3 1.0
ND a:HEA602 1.9 52.3 1.0
NB a:HEA602 1.9 52.3 1.0
CE1 a:HIS380 2.9 50.1 1.0
C1B a:HEA602 2.9 52.3 1.0
C1D a:HEA602 2.9 52.3 1.0
C4A a:HEA602 2.9 52.3 1.0
C4C a:HEA602 2.9 52.3 1.0
C1C a:HEA602 3.0 52.3 1.0
C4D a:HEA602 3.0 52.3 1.0
C4B a:HEA602 3.0 52.3 1.0
C1A a:HEA602 3.0 52.3 1.0
CHD a:HEA602 3.1 52.3 1.0
CHB a:HEA602 3.1 52.3 1.0
CE1 a:HIS64 3.2 48.5 1.0
CHC a:HEA602 3.3 52.3 1.0
CHA a:HEA602 3.4 52.3 1.0
ND1 a:HIS380 3.4 50.1 1.0
NE2 a:HIS380 4.0 50.1 1.0
NE2 a:HIS64 4.1 48.5 1.0
C3C a:HEA602 4.1 52.3 1.0
C2C a:HEA602 4.1 52.3 1.0
C3A a:HEA602 4.1 52.3 1.0
C2A a:HEA602 4.1 52.3 1.0
C2B a:HEA602 4.1 52.3 1.0
ND1 a:HIS64 4.1 48.5 1.0
C2D a:HEA602 4.1 52.3 1.0
C3D a:HEA602 4.2 52.3 1.0
C3B a:HEA602 4.2 52.3 1.0
CG a:HIS380 4.8 50.1 1.0
CE1 a:PHE379 4.8 50.2 1.0

Iron binding site 2 out of 2 in 8ucl

Go back to Iron Binding Sites List in 8ucl
Iron binding site 2 out of 2 in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe603

b:53.5
occ:1.00
FE a:HEA603 0.0 53.5 1.0
NA a:HEA603 1.9 53.5 1.0
ND a:HEA603 1.9 53.5 1.0
NB a:HEA603 1.9 53.5 1.0
NC a:HEA603 1.9 53.5 1.0
C4D a:HEA603 2.8 53.5 1.0
C4B a:HEA603 2.8 53.5 1.0
C1C a:HEA603 2.9 53.5 1.0
C1A a:HEA603 2.9 53.5 1.0
C1D a:HEA603 3.0 53.5 1.0
C1B a:HEA603 3.0 53.5 1.0
C4A a:HEA603 3.0 53.5 1.0
C4C a:HEA603 3.0 53.5 1.0
CHA a:HEA603 3.0 53.5 1.0
CHC a:HEA603 3.0 53.5 1.0
CHD a:HEA603 3.3 53.5 1.0
CHB a:HEA603 3.3 53.5 1.0
CU a:CU601 3.4 56.1 1.0
CE1 a:HIS243 3.9 50.3 1.0
C2C a:HEA603 4.1 53.5 1.0
C2A a:HEA603 4.1 53.5 1.0
C3D a:HEA603 4.1 53.5 1.0
C3A a:HEA603 4.1 53.5 1.0
C3B a:HEA603 4.1 53.5 1.0
C3C a:HEA603 4.1 53.5 1.0
NE2 a:HIS378 4.2 50.0 1.0
C2B a:HEA603 4.2 53.5 1.0
C2D a:HEA603 4.2 53.5 1.0
ND1 a:HIS243 4.5 50.3 1.0
CG1 a:VAL246 4.7 50.2 1.0
NE2 a:HIS243 4.9 50.3 1.0
CD2 a:HIS378 4.9 50.0 1.0

Reference:

J.Ye, B.Liu, W.Li. Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine To Be Published.
Page generated: Thu Oct 31 20:46:03 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy